RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 HK3P52790 923 aa14.39□□□□□ -0.11
DDX54-203ENST00000546869 SRP54P61011 504 aaKnown RBP14.39□□□□□ -0.11
DDX54-203ENST00000546869 BNIP3Q12983 259 aa14.39□□□□□ -0.11
DDX54-203ENST00000546869 INAVAQ3KP66 663 aa14.39□□□□□ -0.11
DDX54-203ENST00000546869 ENPP7Q6UWV6 458 aa14.39□□□□□ -0.11
DDX54-203ENST00000546869 SYDE1Q6ZW31 735 aaPredicted RBP14.39□□□□□ -0.11
DDX54-203ENST00000546869 SLC25A45Q8N413 288 aa14.39□□□□□ -0.11
DDX54-203ENST00000546869 CAPZA3Q96KX2 299 aa14.39□□□□□ -0.11
DDX54-203ENST00000546869 VPS35Q96QK1 796 aa14.39□□□□□ -0.11
DDX54-203ENST00000546869 RANBP9Q96S59 729 aa14.39□□□□□ -0.11
DDX54-203ENST00000546869 FRMD8Q9BZ67 464 aaPredicted RBP14.39□□□□□ -0.11
DDX54-203ENST00000546869 IL26Q9NPH9 171 aa14.39□□□□□ -0.11
DDX54-203ENST00000546869 DNAJC28Q9NX36 388 aa14.39□□□□□ -0.11
DDX54-203ENST00000546869 VPS18Q9P253 973 aa14.39□□□□□ -0.11
DDX54-203ENST00000546869 KLQ9UEF7 1012 aa14.39□□□□□ -0.11
DDX54-203ENST00000546869 APPL1Q9UKG1 709 aa14.39□□□□□ -0.11
DDX54-203ENST00000546869 PNMA8BQ9ULN7 279 aaPredicted RBP14.39□□□□□ -0.11
DDX54-203ENST00000546869 KNL1Q8NG31 2342 aa14.38□□□□□ -0.11
DDX54-203ENST00000546869 MROH6A6NGR9 719 aa14.38□□□□□ -0.11
DDX54-203ENST00000546869 FADS2P1A8MWK0 482 aa14.38□□□□□ -0.11
DDX54-203ENST00000546869 GPR89AB7ZAQ6 455 aa14.38□□□□□ -0.11
DDX54-203ENST00000546869 H7C0S8 307 aa14.38□□□□□ -0.11
DDX54-203ENST00000546869 RASGRP1O95267 797 aa14.38□□□□□ -0.11
DDX54-203ENST00000546869 TNFP01375 233 aa14.38□□□□□ -0.11
DDX54-203ENST00000546869 CEACAM5P06731 702 aa14.38□□□□□ -0.11
DDX54-203ENST00000546869 GPR89BP0CG08 455 aa14.38□□□□□ -0.11
DDX54-203ENST00000546869 CEACAM1P13688 526 aa14.38□□□□□ -0.11
DDX54-203ENST00000546869 JUNDP17535 347 aa14.38□□□□□ -0.11
DDX54-203ENST00000546869 GRK6P43250 576 aa14.38□□□□□ -0.11
DDX54-203ENST00000546869 ID4P47928 161 aa14.38□□□□□ -0.11
DDX54-203ENST00000546869 BASP1P80723 227 aaKnown RBP14.38□□□□□ -0.11
DDX54-203ENST00000546869 GPS1Q13098 491 aa14.38□□□□□ -0.11
DDX54-203ENST00000546869 ALG11Q2TAA5 492 aa14.38□□□□□ -0.11
DDX54-203ENST00000546869 ZNF572Q7Z3I7 529 aaPredicted RBP14.38□□□□□ -0.11
DDX54-203ENST00000546869 PHACTR4Q8IZ21 702 aa14.38□□□□□ -0.11
DDX54-203ENST00000546869 FSTL5Q8N475 847 aaPredicted RBP14.38□□□□□ -0.11
DDX54-203ENST00000546869 TAB3Q8N5C8 712 aaPredicted RBP14.38□□□□□ -0.11
DDX54-203ENST00000546869 DNAAF3Q8N9W5 541 aa14.38□□□□□ -0.11
DDX54-203ENST00000546869 OR52K1Q8NGK4 314 aa14.38□□□□□ -0.11
DDX54-203ENST00000546869 BAHD1Q8TBE0 780 aaPredicted RBP14.38□□□□□ -0.11
DDX54-203ENST00000546869 PEX13Q92968 403 aa14.38□□□□□ -0.11
DDX54-203ENST00000546869 SPATA16Q9BXB7 569 aa14.38□□□□□ -0.11
DDX54-203ENST00000546869 SLC13A1Q9BZW2 595 aa14.38□□□□□ -0.11
DDX54-203ENST00000546869 DDX47Q9H0S4 455 aaKnown RBP14.38□□□□□ -0.11
DDX54-203ENST00000546869 SLC32A1Q9H598 525 aa14.38□□□□□ -0.11
DDX54-203ENST00000546869 SPASTQ9UBP0 616 aa14.38□□□□□ -0.11
DDX54-203ENST00000546869 PCOLCE2Q9UKZ9 415 aa14.38□□□□□ -0.11
DDX54-203ENST00000546869 ARL5AQ9Y689 179 aa14.38□□□□□ -0.11
DDX54-203ENST00000546869 ADAMTS9Q9P2N4 1935 aa14.37□□□□□ -0.11
DDX54-203ENST00000546869 AGAP14A8MT82 685 aa14.37□□□□□ -0.11
DDX54-203ENST00000546869 TPP1O14773 563 aa14.37□□□□□ -0.11
DDX54-203ENST00000546869 SCAMP1O15126 338 aa14.37□□□□□ -0.11
DDX54-203ENST00000546869 IVLP07476 585 aa14.37□□□□□ -0.11
DDX54-203ENST00000546869 TPH1P17752 444 aa14.37□□□□□ -0.11
DDX54-203ENST00000546869 ADRA1DP25100 572 aa14.37□□□□□ -0.11
DDX54-203ENST00000546869 PTGIRP43119 386 aa14.37□□□□□ -0.11
DDX54-203ENST00000546869 NPY2RP49146 381 aa14.37□□□□□ -0.11
DDX54-203ENST00000546869 ZNF140P52738 457 aaPredicted RBP14.37□□□□□ -0.11
DDX54-203ENST00000546869 SARNPP82979 210 aaKnown RBP14.37□□□□□ -0.11
DDX54-203ENST00000546869 ITGA9Q13797 1035 aa14.37□□□□□ -0.11
DDX54-203ENST00000546869 PTK6Q13882 451 aa14.37□□□□□ -0.11
DDX54-203ENST00000546869 KCNJ11Q14654 390 aa14.37□□□□□ -0.11
DDX54-203ENST00000546869 TRIP13Q15645 432 aaPredicted RBP14.37□□□□□ -0.11
DDX54-203ENST00000546869 LRRC8BQ6P9F7 803 aa14.37□□□□□ -0.11
DDX54-203ENST00000546869 LVRNQ6Q4G3 990 aa14.37□□□□□ -0.11
DDX54-203ENST00000546869 PPP1R21Q6ZMI0 780 aa14.37□□□□□ -0.11
DDX54-203ENST00000546869 NLRP9Q7RTR0 991 aa14.37□□□□□ -0.11
DDX54-203ENST00000546869 NAXDQ8IW45 347 aa14.37□□□□□ -0.11
DDX54-203ENST00000546869 MCUQ8NE86 351 aa14.37□□□□□ -0.11
DDX54-203ENST00000546869 OR4K2Q8NGD2 314 aa14.37□□□□□ -0.11
DDX54-203ENST00000546869 STYXQ8WUJ0 223 aa14.37□□□□□ -0.11
DDX54-203ENST00000546869 GLYATL1Q969I3 302 aa14.37□□□□□ -0.11
DDX54-203ENST00000546869 C16orf45Q96MC5 204 aaPredicted RBP14.37□□□□□ -0.11
DDX54-203ENST00000546869 CDC6Q99741 560 aa14.37□□□□□ -0.11
DDX54-203ENST00000546869 RMI1Q9H9A7 625 aa14.37□□□□□ -0.11
DDX54-203ENST00000546869 TRIM39Q9HCM9 518 aa14.37□□□□□ -0.11
DDX54-203ENST00000546869 FGF22Q9HCT0 170 aa14.37□□□□□ -0.11
DDX54-203ENST00000546869 BPIFA1Q9NP55 256 aa14.37□□□□□ -0.11
DDX54-203ENST00000546869 NLE1Q9NVX2 485 aaPredicted RBP14.37□□□□□ -0.11
DDX54-203ENST00000546869 SMOXQ9NWM0 555 aa14.37□□□□□ -0.11
DDX54-203ENST00000546869 TRNAU1APQ9NX07 287 aaKnown RBP14.37□□□□□ -0.11
DDX54-203ENST00000546869 APOBEC3BQ9UH17 382 aaKnown RBP14.37□□□□□ -0.11
DDX54-203ENST00000546869 CEP250Q9BV73 2442 aa14.37□□□□□ -0.11
DDX54-203ENST00000546869 GLYATL1P3A0A0U1RQE8 302 aa14.36□□□□□ -0.11
DDX54-203ENST00000546869 PRSS38A1L453 326 aa14.36□□□□□ -0.11
DDX54-203ENST00000546869 HEATR9A2RTY3 570 aa14.36□□□□□ -0.11
DDX54-203ENST00000546869 GAPDHSO14556 408 aaPredicted RBP14.36□□□□□ -0.11
DDX54-203ENST00000546869 AQP9O43315 295 aa14.36□□□□□ -0.11
DDX54-203ENST00000546869 SH3BP5O60239 455 aa14.36□□□□□ -0.11
DDX54-203ENST00000546869 FUCA1P04066 466 aa14.36□□□□□ -0.11
DDX54-203ENST00000546869 GIMD1P0DJR0 217 aa14.36□□□□□ -0.11
DDX54-203ENST00000546869 MLNP12872 115 aa14.36□□□□□ -0.11
DDX54-203ENST00000546869 GRIA1P42261 906 aa14.36□□□□□ -0.11
DDX54-203ENST00000546869 XIAPP98170 497 aa14.36□□□□□ -0.11
DDX54-203ENST00000546869 TUBB2AQ13885 445 aa14.36□□□□□ -0.11
DDX54-203ENST00000546869 DHX34Q14147 1143 aaKnown RBP14.36□□□□□ -0.11
DDX54-203ENST00000546869 ELOCQ15369 112 aa14.36□□□□□ -0.11
DDX54-203ENST00000546869 SKIDA1Q1XH10 827 aa14.36□□□□□ -0.11
DDX54-203ENST00000546869 ZNF542PQ5EBM4 170 aa14.36□□□□□ -0.11
DDX54-203ENST00000546869 PCGF5Q86SE9 256 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms