RNA–Protein interactions for RNA: ENST00000546812.1

SSH1-205, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-205ENST00000546812 TUBGCP5Q96RT8 1024 aa9.21□□□□□ -0.94
SSH1-205ENST00000546812 TEX101Q9BY14 249 aa9.21□□□□□ -0.94
SSH1-205ENST00000546812 TRIM55Q9BYV6 548 aa9.21□□□□□ -0.94
SSH1-205ENST00000546812 FRMD8Q9BZ67 464 aaPredicted RBP9.21□□□□□ -0.94
SSH1-205ENST00000546812 KLC2Q9H0B6 622 aa9.21□□□□□ -0.94
SSH1-205ENST00000546812 PDCL3Q9H2J4 239 aa9.21□□□□□ -0.94
SSH1-205ENST00000546812 NOL6Q9H6R4 1146 aaKnown RBP9.21□□□□□ -0.94
SSH1-205ENST00000546812 PHPT1Q9NRX4 125 aaPredicted RBP9.21□□□□□ -0.94
SSH1-205ENST00000546812 SIDT1Q9NXL6 827 aaKnown RBP9.21□□□□□ -0.94
SSH1-205ENST00000546812 NEU3Q9UQ49 428 aa9.21□□□□□ -0.94
SSH1-205ENST00000546812 SLC5A6Q9Y289 635 aa9.21□□□□□ -0.94
SSH1-205ENST00000546812 LUC7L2Q9Y383 392 aaKnown RBP9.21□□□□□ -0.94
SSH1-205ENST00000546812 PCDHGA9Q9Y5G4 932 aaKnown RBP9.21□□□□□ -0.94
SSH1-205ENST00000546812 PCDHGA6Q9Y5G7 932 aa9.21□□□□□ -0.94
SSH1-205ENST00000546812 SHANK1Q9Y566 2161 aa9.2□□□□□ -0.94
SSH1-205ENST00000546812 IVLP07476 585 aa9.2□□□□□ -0.94
SSH1-205ENST00000546812 SKILP12757 684 aa9.2□□□□□ -0.94
SSH1-205ENST00000546812 PRF1P14222 555 aa9.2□□□□□ -0.94
SSH1-205ENST00000546812 ZNF28P17035 718 aa9.2□□□□□ -0.94
SSH1-205ENST00000546812 CHRNB2P17787 502 aa9.2□□□□□ -0.94
SSH1-205ENST00000546812 CDC25BP30305 580 aa9.2□□□□□ -0.94
SSH1-205ENST00000546812 ACTR1BP42025 376 aa9.2□□□□□ -0.94
SSH1-205ENST00000546812 LEPRP48357 1165 aaKnown RBP9.2□□□□□ -0.94
SSH1-205ENST00000546812 ACTR1AP61163 376 aa9.2□□□□□ -0.94
SSH1-205ENST00000546812 FMO1Q01740 532 aa9.2□□□□□ -0.94
SSH1-205ENST00000546812 ACOX1Q15067 660 aa9.2□□□□□ -0.94
SSH1-205ENST00000546812 KRTAP21-3Q3LHN1 58 aa9.2□□□□□ -0.94
SSH1-205ENST00000546812 TDRD12Q587J7 1177 aaKnown RBP9.2□□□□□ -0.94
SSH1-205ENST00000546812 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.2□□□□□ -0.94
SSH1-205ENST00000546812 JMJD6Q6NYC1 403 aaPredicted RBP9.2□□□□□ -0.94
SSH1-205ENST00000546812 DPPA4Q7L190 304 aa9.2□□□□□ -0.94
SSH1-205ENST00000546812 ARCQ7LC44 396 aa9.2□□□□□ -0.94
SSH1-205ENST00000546812 IRF2BP2Q7Z5L9 587 aa9.2□□□□□ -0.94
SSH1-205ENST00000546812 XYLT1Q86Y38 959 aa9.2□□□□□ -0.94
SSH1-205ENST00000546812 TP53INP2Q8IXH6 220 aa9.2□□□□□ -0.94
SSH1-205ENST00000546812 SFRP1Q8N474 314 aa9.2□□□□□ -0.94
SSH1-205ENST00000546812 TTC13Q8NBP0 860 aa9.2□□□□□ -0.94
SSH1-205ENST00000546812 SPC24Q8NBT2 197 aa9.2□□□□□ -0.94
SSH1-205ENST00000546812 GALNT6Q8NCL4 622 aa9.2□□□□□ -0.94
SSH1-205ENST00000546812 SLC37A2Q8TED4 501 aa9.2□□□□□ -0.94
SSH1-205ENST00000546812 PDCD6IPQ8WUM4 868 aaKnown RBP9.2□□□□□ -0.94
SSH1-205ENST00000546812 TBC1D31Q96DN5 1066 aa9.2□□□□□ -0.94
SSH1-205ENST00000546812 SLC25A23Q9BV35 468 aa9.2□□□□□ -0.94
SSH1-205ENST00000546812 MAGEB5Q9BZ81 275 aa9.2□□□□□ -0.94
SSH1-205ENST00000546812 SEPT11Q9NVA2 429 aaKnown RBP9.2□□□□□ -0.94
SSH1-205ENST00000546812 RCOR3Q9P2K3 495 aaPredicted RBP9.2□□□□□ -0.94
SSH1-205ENST00000546812 TMEM59LQ9UK28 342 aa9.2□□□□□ -0.94
SSH1-205ENST00000546812 SLC17A4Q9Y2C5 497 aa9.2□□□□□ -0.94
SSH1-205ENST00000546812 PLEKHM1Q9Y4G2 1056 aa9.2□□□□□ -0.94
SSH1-205ENST00000546812 CSMD2Q7Z408 3487 aa9.2□□□□□ -0.94
SSH1-205ENST00000546812 CHD5Q8TDI0 1954 aa9.19□□□□□ -0.94
SSH1-205ENST00000546812 TRBV23OR9-2A0A075B6M9 112 aa9.19□□□□□ -0.94
SSH1-205ENST00000546812 HNRNPRO43390 633 aaKnown RBP9.19□□□□□ -0.94
SSH1-205ENST00000546812 LRCH4O75427 683 aa9.19□□□□□ -0.94
SSH1-205ENST00000546812 PLEKP08567 350 aaPredicted RBP9.19□□□□□ -0.94
SSH1-205ENST00000546812 CCDC172P0C7W6 258 aa9.19□□□□□ -0.94
SSH1-205ENST00000546812 CCNYL3P0C7X3 344 aa9.19□□□□□ -0.94
SSH1-205ENST00000546812 PRKCIP41743 596 aa9.19□□□□□ -0.94
SSH1-205ENST00000546812 POLD2P49005 469 aa9.19□□□□□ -0.94
SSH1-205ENST00000546812 NDST2P52849 883 aa9.19□□□□□ -0.94
SSH1-205ENST00000546812 YBEYP58557 167 aaPredicted RBP9.19□□□□□ -0.94
SSH1-205ENST00000546812 POLR2LP62875 67 aaKnown RBP9.19□□□□□ -0.94
SSH1-205ENST00000546812 NOMO3P69849 1222 aa9.19□□□□□ -0.94
SSH1-205ENST00000546812 ATP11AP98196 1134 aa9.19□□□□□ -0.94
SSH1-205ENST00000546812 CDK3Q00526 305 aa9.19□□□□□ -0.94
SSH1-205ENST00000546812 FOXM1Q08050 763 aa9.19□□□□□ -0.94
SSH1-205ENST00000546812 KLHL30Q0D2K2 578 aa9.19□□□□□ -0.94
SSH1-205ENST00000546812 NAA30Q147X3 362 aaPredicted RBP9.19□□□□□ -0.94
SSH1-205ENST00000546812 RAB6CQ53S08 254 aa9.19□□□□□ -0.94
SSH1-205ENST00000546812 ZRANB3Q5FWF4 1079 aa9.19□□□□□ -0.94
SSH1-205ENST00000546812 NAA35Q5VZE5 725 aa9.19□□□□□ -0.94
SSH1-205ENST00000546812 ZNF677Q86XU0 584 aa9.19□□□□□ -0.94
SSH1-205ENST00000546812 RTL3Q8N8U3 475 aaKnown RBP9.19□□□□□ -0.94
SSH1-205ENST00000546812 Q8NA96 180 aa9.19□□□□□ -0.94
SSH1-205ENST00000546812 TMEM35BQ8NCS4 154 aa9.19□□□□□ -0.94
SSH1-205ENST00000546812 THAP4Q8WY91 577 aa9.19□□□□□ -0.94
SSH1-205ENST00000546812 MARVELD3Q96A59 401 aa9.19□□□□□ -0.94
SSH1-205ENST00000546812 ECHDC3Q96DC8 303 aa9.19□□□□□ -0.94
SSH1-205ENST00000546812 NUS1Q96E22 293 aa9.19□□□□□ -0.94
SSH1-205ENST00000546812 STAMBPL1Q96FJ0 436 aa9.19□□□□□ -0.94
SSH1-205ENST00000546812 SCARF2Q96GP6 870 aaPredicted RBP9.19□□□□□ -0.94
SSH1-205ENST00000546812 COQ10AQ96MF6 247 aa9.19□□□□□ -0.94
SSH1-205ENST00000546812 DNAJC7Q99615 494 aa9.19□□□□□ -0.94
SSH1-205ENST00000546812 AGPAT1Q99943 283 aa9.19□□□□□ -0.94
SSH1-205ENST00000546812 RAB6CQ9H0N0 254 aa9.19□□□□□ -0.94
SSH1-205ENST00000546812 HAUS4Q9H6D7 363 aa9.19□□□□□ -0.94
SSH1-205ENST00000546812 ATP13A3Q9H7F0 1226 aa9.19□□□□□ -0.94
SSH1-205ENST00000546812 SLAMF7Q9NQ25 335 aa9.19□□□□□ -0.94
SSH1-205ENST00000546812 ABHD10Q9NUJ1 306 aa9.19□□□□□ -0.94
SSH1-205ENST00000546812 KCTD5Q9NXV2 234 aa9.19□□□□□ -0.94
SSH1-205ENST00000546812 AIPL1Q9NZN9 384 aa9.19□□□□□ -0.94
SSH1-205ENST00000546812 UBA2Q9UBT2 640 aaPredicted RBP9.19□□□□□ -0.94
SSH1-205ENST00000546812 PADI1Q9ULC6 663 aa9.19□□□□□ -0.94
SSH1-205ENST00000546812 PCDHGB7Q9Y5F8 929 aa9.19□□□□□ -0.94
SSH1-205ENST00000546812 AKAP9Q99996 3911 aa9.18□□□□□ -0.94
SSH1-205ENST00000546812 A6NCN8 305 aa9.18□□□□□ -0.94
SSH1-205ENST00000546812 A8MX80 341 aa9.18□□□□□ -0.94
SSH1-205ENST00000546812 C21orf140B9A014 251 aa9.18□□□□□ -0.94
SSH1-205ENST00000546812 RASA4BC9J798 803 aa9.18□□□□□ -0.94
SSH1-205ENST00000546812 AKR1B15C9JRZ8 316 aaPredicted RBP9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms