RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 PRAMEF1O95521 474 aa12.77□□□□□ -0.37
CHD4-211ENST00000544484 INHAP05111 366 aa12.77□□□□□ -0.37
CHD4-211ENST00000544484 RALGDSQ12967 914 aa12.77□□□□□ -0.37
CHD4-211ENST00000544484 KCTD21Q4G0X4 260 aa12.77□□□□□ -0.37
CHD4-211ENST00000544484 TIGD5Q53EQ6 642 aa12.77□□□□□ -0.37
CHD4-211ENST00000544484 OR4A15Q8NGL6 344 aa12.77□□□□□ -0.37
CHD4-211ENST00000544484 ITCHQ96J02 903 aa12.77□□□□□ -0.37
CHD4-211ENST00000544484 DNAJC1Q96KC8 554 aaKnown RBP12.77□□□□□ -0.37
CHD4-211ENST00000544484 MCMBPQ9BTE3 642 aa12.77□□□□□ -0.37
CHD4-211ENST00000544484 CCDC85CA6NKD9 419 aa12.77□□□□□ -0.37
CHD4-211ENST00000544484 ENPP3O14638 875 aa12.77□□□□□ -0.37
CHD4-211ENST00000544484 SSR2P43308 183 aa12.77□□□□□ -0.37
CHD4-211ENST00000544484 SP2Q02086 613 aa12.77□□□□□ -0.37
CHD4-211ENST00000544484 RGS1Q08116 209 aa12.77□□□□□ -0.37
CHD4-211ENST00000544484 KLF10Q13118 480 aa12.77□□□□□ -0.37
CHD4-211ENST00000544484 C3orf18Q9UK00 162 aa12.77□□□□□ -0.37
CHD4-211ENST00000544484 LRRC73Q5JTD7 316 aa12.76□□□□□ -0.37
CHD4-211ENST00000544484 AKAP7Q9P0M2 348 aaPredicted RBP12.76□□□□□ -0.37
CHD4-211ENST00000544484 MAP10Q9P2G4 905 aa12.76□□□□□ -0.37
CHD4-211ENST00000544484 TCAF1Q9Y4C2 921 aa12.76□□□□□ -0.37
CHD4-211ENST00000544484 MATN3O15232 486 aa12.76□□□□□ -0.37
CHD4-211ENST00000544484 MANFP55145 182 aaKnown RBP12.76□□□□□ -0.37
CHD4-211ENST00000544484 DGUOKQ16854 277 aa12.76□□□□□ -0.37
CHD4-211ENST00000544484 ARL13AQ5H913 290 aaPredicted RBP12.76□□□□□ -0.37
CHD4-211ENST00000544484 SPANXN2Q5MJ10 180 aa12.76□□□□□ -0.37
CHD4-211ENST00000544484 NAIF1Q69YI7 327 aaPredicted RBP12.76□□□□□ -0.37
CHD4-211ENST00000544484 C17orf64Q86WR6 236 aa12.76□□□□□ -0.37
CHD4-211ENST00000544484 STYXQ8WUJ0 223 aa12.76□□□□□ -0.37
CHD4-211ENST00000544484 C19orf60Q96EN9 201 aa12.76□□□□□ -0.37
CHD4-211ENST00000544484 NTPCRQ9BSD7 190 aaKnown RBP12.76□□□□□ -0.37
CHD4-211ENST00000544484 HTATIP2Q9BUP3 242 aa12.76□□□□□ -0.37
CHD4-211ENST00000544484 CLIC5Q9NZA1 410 aa12.76□□□□□ -0.37
CHD4-211ENST00000544484 MAT2BQ9NZL9 334 aa12.76□□□□□ -0.37
CHD4-211ENST00000544484 A0A1B0GW55 424 aa12.76□□□□□ -0.37
CHD4-211ENST00000544484 SRRM3A6NNA2 597 aaPredicted RBP12.76□□□□□ -0.37
CHD4-211ENST00000544484 DUX4L2P0CJ85 424 aa12.76□□□□□ -0.37
CHD4-211ENST00000544484 DUX4L3P0CJ86 424 aa12.76□□□□□ -0.37
CHD4-211ENST00000544484 DUX4L4P0CJ87 422 aa12.76□□□□□ -0.37
CHD4-211ENST00000544484 DUX4L5P0CJ88 424 aa12.76□□□□□ -0.37
CHD4-211ENST00000544484 DUX4L6P0CJ89 424 aa12.76□□□□□ -0.37
CHD4-211ENST00000544484 DUX4L7P0CJ90 424 aa12.76□□□□□ -0.37
CHD4-211ENST00000544484 ACRP10323 421 aa12.76□□□□□ -0.37
CHD4-211ENST00000544484 SPAM1P38567 509 aa12.76□□□□□ -0.37
CHD4-211ENST00000544484 HSPA7P48741 367 aa12.76□□□□□ -0.37
CHD4-211ENST00000544484 NAE1Q13564 534 aa12.76□□□□□ -0.37
CHD4-211ENST00000544484 SF1Q15637 639 aaKnown RBP12.76□□□□□ -0.37
CHD4-211ENST00000544484 ZNF618Q5T7W0 954 aa12.76□□□□□ -0.37
CHD4-211ENST00000544484 RALGPS2Q86X27 583 aaPredicted RBP12.76□□□□□ -0.37
CHD4-211ENST00000544484 DENND6AQ8IWF6 608 aa12.76□□□□□ -0.37
CHD4-211ENST00000544484 ZNF540Q8NDQ6 660 aa12.76□□□□□ -0.37
CHD4-211ENST00000544484 TSPAN14Q8NG11 270 aa12.76□□□□□ -0.37
CHD4-211ENST00000544484 ESAMQ96AP7 390 aa12.76□□□□□ -0.37
CHD4-211ENST00000544484 SLC25A51Q9H1U9 297 aa12.76□□□□□ -0.37
CHD4-211ENST00000544484 KCTD5Q9NXV2 234 aa12.76□□□□□ -0.37
CHD4-211ENST00000544484 DUX4Q9UBX2 424 aa12.76□□□□□ -0.37
CHD4-211ENST00000544484 OGDHLQ9ULD0 1010 aa12.76□□□□□ -0.37
CHD4-211ENST00000544484 MAPRE3Q9UPY8 281 aa12.76□□□□□ -0.37
CHD4-211ENST00000544484 A0A1B0GVM2 712 aa12.76□□□□□ -0.37
CHD4-211ENST00000544484 EFCAB10A6NFE3 127 aa12.76□□□□□ -0.37
CHD4-211ENST00000544484 TCAF2A6NFQ2 919 aa12.76□□□□□ -0.37
CHD4-211ENST00000544484 TBX18O95935 607 aa12.76□□□□□ -0.37
CHD4-211ENST00000544484 RPL4P36578 427 aaKnown RBP12.76□□□□□ -0.37
CHD4-211ENST00000544484 NAA20P61599 178 aa12.76□□□□□ -0.37
CHD4-211ENST00000544484 UBR1Q8IWV7 1749 aa12.76□□□□□ -0.37
CHD4-211ENST00000544484 MSL3Q8N5Y2 521 aaKnown RBP12.76□□□□□ -0.37
CHD4-211ENST00000544484 NUAK2Q9H093 628 aa12.76□□□□□ -0.37
CHD4-211ENST00000544484 SLC28A2O43868 658 aa12.76□□□□□ -0.37
CHD4-211ENST00000544484 HIST1H2ABP04908 130 aa12.76□□□□□ -0.37
CHD4-211ENST00000544484 SOWAHAQ2M3V2 549 aa12.76□□□□□ -0.37
CHD4-211ENST00000544484 CAPN13Q6MZZ7 669 aaPredicted RBP12.76□□□□□ -0.37
CHD4-211ENST00000544484 BHLHB9Q6PI77 547 aa12.76□□□□□ -0.37
CHD4-211ENST00000544484 HIST3H2AQ7L7L0 130 aa12.76□□□□□ -0.37
CHD4-211ENST00000544484 HDDC2Q7Z4H3 204 aa12.76□□□□□ -0.37
CHD4-211ENST00000544484 HPS6Q86YV9 775 aa12.76□□□□□ -0.37
CHD4-211ENST00000544484 ZBTB2Q8N680 514 aa12.76□□□□□ -0.37
CHD4-211ENST00000544484 OR52L1Q8NGH7 329 aa12.76□□□□□ -0.37
CHD4-211ENST00000544484 ZNF671Q8TAW3 534 aa12.76□□□□□ -0.37
CHD4-211ENST00000544484 HIST1H2ACQ93077 130 aa12.76□□□□□ -0.37
CHD4-211ENST00000544484 AP2M1Q96CW1 435 aa12.76□□□□□ -0.37
CHD4-211ENST00000544484 EQTNQ9NQ60 294 aa12.76□□□□□ -0.37
CHD4-211ENST00000544484 TBC1D14Q9P2M4 693 aa12.76□□□□□ -0.37
CHD4-211ENST00000544484 URADA6NGE7 173 aa12.75□□□□□ -0.37
CHD4-211ENST00000544484 TIPRLO75663 272 aa12.75□□□□□ -0.37
CHD4-211ENST00000544484 PAX7P23759 505 aa12.75□□□□□ -0.37
CHD4-211ENST00000544484 NRLP54845 237 aa12.75□□□□□ -0.37
CHD4-211ENST00000544484 BNIP2Q12982 314 aa12.75□□□□□ -0.37
CHD4-211ENST00000544484 MTX3Q5HYI7 312 aa12.75□□□□□ -0.37
CHD4-211ENST00000544484 FSTL4Q6MZW2 842 aa12.75□□□□□ -0.37
CHD4-211ENST00000544484 ADGRD1Q6QNK2 874 aa12.75□□□□□ -0.37
CHD4-211ENST00000544484 CLNKQ7Z7G1 428 aa12.75□□□□□ -0.37
CHD4-211ENST00000544484 FBXO22Q8NEZ5 403 aa12.75□□□□□ -0.37
CHD4-211ENST00000544484 AGAP2Q99490 1192 aa12.75□□□□□ -0.37
CHD4-211ENST00000544484 NOL11Q9H8H0 719 aaKnown RBP12.75□□□□□ -0.37
CHD4-211ENST00000544484 FZD10Q9ULW2 581 aa12.75□□□□□ -0.37
CHD4-211ENST00000544484 PCDHGA4Q9Y5G9 962 aa12.75□□□□□ -0.37
CHD4-211ENST00000544484 EME2A4GXA9 379 aaPredicted RBP12.75□□□□□ -0.37
CHD4-211ENST00000544484 GOT2P00505 430 aaKnown RBP12.75□□□□□ -0.37
CHD4-211ENST00000544484 TRBC1P01850 177 aa12.75□□□□□ -0.37
CHD4-211ENST00000544484 UNGP13051 313 aaPredicted RBP12.75□□□□□ -0.37
CHD4-211ENST00000544484 WARSP23381 471 aaKnown RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms