RNA–Protein interactions for RNA: ENST00000544278.2

SNRNP70-203, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 3,221 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-203ENST00000544278 CPNE9Q8IYJ1 553 aa15.73■□□□□ 0.11
SNRNP70-203ENST00000544278 TEX37Q96LM6 180 aa15.73■□□□□ 0.11
SNRNP70-203ENST00000544278 PHF12Q96QT6 1004 aa15.73■□□□□ 0.11
SNRNP70-203ENST00000544278 TRIM62Q9BVG3 475 aa15.73■□□□□ 0.11
SNRNP70-203ENST00000544278 SLAMF8Q9P0V8 285 aa15.73■□□□□ 0.11
SNRNP70-203ENST00000544278 PCDHGA7Q9Y5G6 932 aa15.73■□□□□ 0.11
SNRNP70-203ENST00000544278 MAGEA13PA6NCF6 341 aa15.73■□□□□ 0.11
SNRNP70-203ENST00000544278 MROH6A6NGR9 719 aa15.73■□□□□ 0.11
SNRNP70-203ENST00000544278 PRAMEF11O60813 436 aa15.73■□□□□ 0.11
SNRNP70-203ENST00000544278 MTHFD2P13995 350 aa15.73■□□□□ 0.11
SNRNP70-203ENST00000544278 OXCT1P55809 520 aa15.73■□□□□ 0.11
SNRNP70-203ENST00000544278 DYNC1I2Q13409 638 aaKnown RBP15.73■□□□□ 0.11
SNRNP70-203ENST00000544278 MTX3Q5HYI7 312 aa15.73■□□□□ 0.11
SNRNP70-203ENST00000544278 C16orf89Q6UX73 402 aa15.73■□□□□ 0.11
SNRNP70-203ENST00000544278 SATL1Q86VE3 508 aa15.73■□□□□ 0.11
SNRNP70-203ENST00000544278 DNAJB14Q8TBM8 379 aa15.73■□□□□ 0.11
SNRNP70-203ENST00000544278 RDH11Q8TC12 318 aa15.73■□□□□ 0.11
SNRNP70-203ENST00000544278 C1orf74Q96LT6 269 aa15.73■□□□□ 0.11
SNRNP70-203ENST00000544278 SMG9Q9H0W8 520 aaKnown RBP15.73■□□□□ 0.11
SNRNP70-203ENST00000544278 TUBB1Q9H4B7 451 aa15.73■□□□□ 0.11
SNRNP70-203ENST00000544278 CACNA2D2Q9NY47 1150 aa15.73■□□□□ 0.11
SNRNP70-203ENST00000544278 RNF112Q9ULX5 631 aa15.73■□□□□ 0.11
SNRNP70-203ENST00000544278 CLASP2O75122 1294 aaKnown RBP15.72■□□□□ 0.11
SNRNP70-203ENST00000544278 NDUFS3O75489 264 aa15.72■□□□□ 0.11
SNRNP70-203ENST00000544278 RHOCP08134 193 aa15.72■□□□□ 0.11
SNRNP70-203ENST00000544278 NCK1P16333 377 aa15.72■□□□□ 0.11
SNRNP70-203ENST00000544278 ZNF37AP17032 561 aaPredicted RBP15.72■□□□□ 0.11
SNRNP70-203ENST00000544278 ATP5C1P36542 298 aaKnown RBP15.72■□□□□ 0.11
SNRNP70-203ENST00000544278 PDK3Q15120 406 aa15.72■□□□□ 0.11
SNRNP70-203ENST00000544278 SLC44A4Q53GD3 710 aa15.72■□□□□ 0.11
SNRNP70-203ENST00000544278 C1QTNF12Q5T7M4 302 aa15.72■□□□□ 0.11
SNRNP70-203ENST00000544278 FUNDC1Q8IVP5 155 aa15.72■□□□□ 0.11
SNRNP70-203ENST00000544278 HIC2Q96JB3 615 aa15.72■□□□□ 0.11
SNRNP70-203ENST00000544278 CIB1Q99828 191 aa15.72■□□□□ 0.11
SNRNP70-203ENST00000544278 ZNF385DQ9H6B1 395 aa15.72■□□□□ 0.11
SNRNP70-203ENST00000544278 ACSL4O60488 711 aa15.72■□□□□ 0.11
SNRNP70-203ENST00000544278 HGFP14210 728 aa15.72■□□□□ 0.11
SNRNP70-203ENST00000544278 IL10RBQ08334 325 aa15.72■□□□□ 0.11
SNRNP70-203ENST00000544278 TMED1Q13445 227 aa15.72■□□□□ 0.11
SNRNP70-203ENST00000544278 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.72■□□□□ 0.11
SNRNP70-203ENST00000544278 METTL21CQ5VZV1 264 aa15.72■□□□□ 0.11
SNRNP70-203ENST00000544278 TPGS1Q6ZTW0 290 aa15.72■□□□□ 0.11
SNRNP70-203ENST00000544278 CALML6Q8TD86 181 aa15.72■□□□□ 0.11
SNRNP70-203ENST00000544278 C19orf60Q96EN9 201 aa15.72■□□□□ 0.11
SNRNP70-203ENST00000544278 MFSD1Q9H3U5 465 aa15.72■□□□□ 0.11
SNRNP70-203ENST00000544278 UBA2Q9UBT2 640 aaPredicted RBP15.72■□□□□ 0.11
SNRNP70-203ENST00000544278 EOMESO95936 686 aa15.72■□□□□ 0.11
SNRNP70-203ENST00000544278 ZNF135P52742 658 aaPredicted RBP15.72■□□□□ 0.11
SNRNP70-203ENST00000544278 RPS6KA2Q15349 733 aa15.72■□□□□ 0.11
SNRNP70-203ENST00000544278 CDYL2Q8N8U2 506 aa15.72■□□□□ 0.11
SNRNP70-203ENST00000544278 EEF1AKMT1Q8WVE0 214 aa15.72■□□□□ 0.11
SNRNP70-203ENST00000544278 TWIST2Q8WVJ9 160 aa15.72■□□□□ 0.11
SNRNP70-203ENST00000544278 TTPALQ9BTX7 342 aa15.72■□□□□ 0.11
SNRNP70-203ENST00000544278 CCDC68Q9H2F9 335 aa15.72■□□□□ 0.11
SNRNP70-203ENST00000544278 DDX18Q9NVP1 670 aaKnown RBP15.72■□□□□ 0.11
SNRNP70-203ENST00000544278 MED16Q9Y2X0 877 aa15.72■□□□□ 0.11
SNRNP70-203ENST00000544278 LOC285095A0A1B0GVY8 99 aa15.71■□□□□ 0.11
SNRNP70-203ENST00000544278 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.71■□□□□ 0.11
SNRNP70-203ENST00000544278 SAC3D1A6NKF1 404 aa15.71■□□□□ 0.11
SNRNP70-203ENST00000544278 SLC7A4O43246 635 aa15.71■□□□□ 0.11
SNRNP70-203ENST00000544278 PRLP01236 227 aa15.71■□□□□ 0.11
SNRNP70-203ENST00000544278 MTHFD1P11586 935 aaKnown RBP15.71■□□□□ 0.11
SNRNP70-203ENST00000544278 COL6A2P12110 1019 aa15.71■□□□□ 0.11
SNRNP70-203ENST00000544278 MC4RP32245 332 aa15.71■□□□□ 0.11
SNRNP70-203ENST00000544278 GPR17Q13304 367 aa15.71■□□□□ 0.11
SNRNP70-203ENST00000544278 SETMARQ53H47 684 aaPredicted RBP15.71■□□□□ 0.11
SNRNP70-203ENST00000544278 TXNDC8Q6A555 127 aa15.71■□□□□ 0.11
SNRNP70-203ENST00000544278 CAMK1DQ8IU85 385 aa15.71■□□□□ 0.11
SNRNP70-203ENST00000544278 PGAM4Q8N0Y7 254 aa15.71■□□□□ 0.11
SNRNP70-203ENST00000544278 MYO1HQ8N1T3 1032 aa15.71■□□□□ 0.11
SNRNP70-203ENST00000544278 SCUBE2Q9NQ36 999 aa15.71■□□□□ 0.11
SNRNP70-203ENST00000544278 TMEM161AQ9NX61 479 aa15.71■□□□□ 0.11
SNRNP70-203ENST00000544278 EIF2B4Q9UI10 523 aaKnown RBP15.71■□□□□ 0.11
SNRNP70-203ENST00000544278 PDLIM1O00151 329 aa15.71■□□□□ 0.11
SNRNP70-203ENST00000544278 ECI2O75521 394 aa15.71■□□□□ 0.11
SNRNP70-203ENST00000544278 RPP40O75818 363 aaKnown RBP15.71■□□□□ 0.11
SNRNP70-203ENST00000544278 RBP1P09455 135 aa15.71■□□□□ 0.11
SNRNP70-203ENST00000544278 UGT1A1P22309 533 aa15.71■□□□□ 0.11
SNRNP70-203ENST00000544278 UGT1A4P22310 534 aa15.71■□□□□ 0.11
SNRNP70-203ENST00000544278 UGT1A3P35503 534 aa15.71■□□□□ 0.11
SNRNP70-203ENST00000544278 UGT1A5P35504 534 aa15.71■□□□□ 0.11
SNRNP70-203ENST00000544278 GRIA3P42263 894 aa15.71■□□□□ 0.11
SNRNP70-203ENST00000544278 GDF5P43026 501 aa15.71■□□□□ 0.11
SNRNP70-203ENST00000544278 ACAP2Q15057 778 aa15.71■□□□□ 0.11
SNRNP70-203ENST00000544278 SGO1Q5FBB7 561 aa15.71■□□□□ 0.11
SNRNP70-203ENST00000544278 RABL3Q5HYI8 236 aa15.71■□□□□ 0.11
SNRNP70-203ENST00000544278 FUBP3Q96I24 572 aaKnown RBP eCLIP15.71■□□□□ 0.11
SNRNP70-203ENST00000544278 CNDP1Q96KN2 507 aa15.71■□□□□ 0.11
SNRNP70-203ENST00000544278 TMEM74Q96NL1 305 aa15.71■□□□□ 0.11
SNRNP70-203ENST00000544278 SERPINI1Q99574 410 aa15.71■□□□□ 0.11
SNRNP70-203ENST00000544278 BOCQ9BWV1 1114 aa15.71■□□□□ 0.11
SNRNP70-203ENST00000544278 VN1R3Q9BXE9 311 aa15.71■□□□□ 0.11
SNRNP70-203ENST00000544278 TNKS2Q9H2K2 1166 aa15.71■□□□□ 0.11
SNRNP70-203ENST00000544278 NOL11Q9H8H0 719 aaKnown RBP15.71■□□□□ 0.11
SNRNP70-203ENST00000544278 VTI1BQ9UEU0 232 aa15.71■□□□□ 0.11
SNRNP70-203ENST00000544278 AGO1Q9UL18 857 aaKnown RBP15.71■□□□□ 0.11
SNRNP70-203ENST00000544278 BLOC1S6Q9UL45 172 aa15.71■□□□□ 0.11
SNRNP70-203ENST00000544278 RAI2Q9Y5P3 530 aa15.71■□□□□ 0.11
SNRNP70-203ENST00000544278 SQORQ9Y6N5 450 aa15.71■□□□□ 0.11
SNRNP70-203ENST00000544278 CROCCQ5TZA2 2017 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms