RNA–Protein interactions for RNA: ENST00000543002.5

RABGGTA-203, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 1,329 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-203ENST00000543002 SCN8AQ9UQD0 1980 aa17.01■□□□□ 0.31
RABGGTA-203ENST00000543002 A0A1B0GTQ1 180 aa17.01■□□□□ 0.31
RABGGTA-203ENST00000543002 FAM187AA6NFU0 413 aa17.01■□□□□ 0.31
RABGGTA-203ENST00000543002 FADS2P1A8MWK0 482 aa17.01■□□□□ 0.31
RABGGTA-203ENST00000543002 DNALI1O14645 258 aaPredicted RBP17.01■□□□□ 0.31
RABGGTA-203ENST00000543002 ZNF883P0CG24 379 aa17.01■□□□□ 0.31
RABGGTA-203ENST00000543002 KELP23276 732 aa17.01■□□□□ 0.31
RABGGTA-203ENST00000543002 ADRA1DP25100 572 aa17.01■□□□□ 0.31
RABGGTA-203ENST00000543002 NPY2RP49146 381 aa17.01■□□□□ 0.31
RABGGTA-203ENST00000543002 CDK3Q00526 305 aa17.01■□□□□ 0.31
RABGGTA-203ENST00000543002 EIF2B5Q13144 721 aaKnown RBP17.01■□□□□ 0.31
RABGGTA-203ENST00000543002 LAMB3Q13751 1172 aa17.01■□□□□ 0.31
RABGGTA-203ENST00000543002 SEPT6Q14141 434 aa17.01■□□□□ 0.31
RABGGTA-203ENST00000543002 RNASEH2BQ5TBB1 312 aaKnown RBP17.01■□□□□ 0.31
RABGGTA-203ENST00000543002 PDPK2PQ6A1A2 396 aa17.01■□□□□ 0.31
RABGGTA-203ENST00000543002 PCGF5Q86SE9 256 aa17.01■□□□□ 0.31
RABGGTA-203ENST00000543002 PARGQ86W56 976 aa17.01■□□□□ 0.31
RABGGTA-203ENST00000543002 OR13C4Q8NGS5 318 aa17.01■□□□□ 0.31
RABGGTA-203ENST00000543002 STYXQ8WUJ0 223 aa17.01■□□□□ 0.31
RABGGTA-203ENST00000543002 WDR92Q96MX6 357 aa17.01■□□□□ 0.31
RABGGTA-203ENST00000543002 FNDC3AQ9Y2H6 1198 aaKnown RBP17.01■□□□□ 0.31
RABGGTA-203ENST00000543002 GLYATL1P3A0A0U1RQE8 302 aa17■□□□□ 0.31
RABGGTA-203ENST00000543002 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17■□□□□ 0.31
RABGGTA-203ENST00000543002 HEATR9A2RTY3 570 aa17■□□□□ 0.31
RABGGTA-203ENST00000543002 MROH6A6NGR9 719 aa17■□□□□ 0.31
RABGGTA-203ENST00000543002 YKT6O15498 198 aa17■□□□□ 0.31
RABGGTA-203ENST00000543002 RAD51CO43502 376 aa17■□□□□ 0.31
RABGGTA-203ENST00000543002 MLNP12872 115 aa17■□□□□ 0.31
RABGGTA-203ENST00000543002 PSMA3P25788 255 aa17■□□□□ 0.31
RABGGTA-203ENST00000543002 HADHAP40939 763 aa17■□□□□ 0.31
RABGGTA-203ENST00000543002 ARRB1P49407 418 aaPredicted RBP17■□□□□ 0.31
RABGGTA-203ENST00000543002 LIMK1P53667 647 aa17■□□□□ 0.31
RABGGTA-203ENST00000543002 SESN2P58004 480 aaPredicted RBP17■□□□□ 0.31
RABGGTA-203ENST00000543002 ARHGAP8P85298 464 aa17■□□□□ 0.31
RABGGTA-203ENST00000543002 SHBQ15464 509 aa17■□□□□ 0.31
RABGGTA-203ENST00000543002 STPG1Q5TH74 334 aa17■□□□□ 0.31
RABGGTA-203ENST00000543002 ENPP7Q6UWV6 458 aa17■□□□□ 0.31
RABGGTA-203ENST00000543002 MNS1Q8NEH6 495 aa17■□□□□ 0.31
RABGGTA-203ENST00000543002 COX14Q96I36 57 aa17■□□□□ 0.31
RABGGTA-203ENST00000543002 HIC2Q96JB3 615 aa17■□□□□ 0.31
RABGGTA-203ENST00000543002 IL22Q9GZX6 179 aa17■□□□□ 0.31
RABGGTA-203ENST00000543002 XAB2Q9HCS7 855 aaKnown RBP17■□□□□ 0.31
RABGGTA-203ENST00000543002 NLE1Q9NVX2 485 aaPredicted RBP17■□□□□ 0.31
RABGGTA-203ENST00000543002 BFARQ9NZS9 450 aa17■□□□□ 0.31
RABGGTA-203ENST00000543002 RIMKLBQ9ULI2 386 aa17■□□□□ 0.31
RABGGTA-203ENST00000543002 CNOT6Q9ULM6 557 aaKnown RBP17■□□□□ 0.31
RABGGTA-203ENST00000543002 TP53BP1Q12888 1972 aaPredicted RBP17■□□□□ 0.31
RABGGTA-203ENST00000543002 TMEM202A6NGA9 273 aa16.99■□□□□ 0.31
RABGGTA-203ENST00000543002 C4orf47A7E2U8 309 aa16.99■□□□□ 0.31
RABGGTA-203ENST00000543002 GAPDHSO14556 408 aaPredicted RBP16.99■□□□□ 0.31
RABGGTA-203ENST00000543002 TNFRSF10CO14798 259 aa16.99■□□□□ 0.31
RABGGTA-203ENST00000543002 INPP4BO15327 924 aa16.99■□□□□ 0.31
RABGGTA-203ENST00000543002 ZNF500O60304 480 aaPredicted RBP16.99■□□□□ 0.31
RABGGTA-203ENST00000543002 CSF2P04141 144 aa16.99■□□□□ 0.31
RABGGTA-203ENST00000543002 NME1P15531 152 aaKnown RBP16.99■□□□□ 0.31
RABGGTA-203ENST00000543002 CCT8P50990 548 aa16.99■□□□□ 0.31
RABGGTA-203ENST00000543002 CCDC38Q502W7 563 aa16.99■□□□□ 0.31
RABGGTA-203ENST00000543002 PCID2Q5JVF3 399 aa16.99■□□□□ 0.31
RABGGTA-203ENST00000543002 IZUMO3Q5VZ72 239 aa16.99■□□□□ 0.31
RABGGTA-203ENST00000543002 NLRP9Q7RTR0 991 aa16.99■□□□□ 0.31
RABGGTA-203ENST00000543002 CAND1Q86VP6 1230 aaKnown RBP16.99■□□□□ 0.31
RABGGTA-203ENST00000543002 HOOK3Q86VS8 718 aa16.99■□□□□ 0.31
RABGGTA-203ENST00000543002 OR56A4Q8NGH8 313 aa16.99■□□□□ 0.31
RABGGTA-203ENST00000543002 NETO1Q8TDF5 533 aa16.99■□□□□ 0.31
RABGGTA-203ENST00000543002 DNAJC1Q96KC8 554 aaKnown RBP16.99■□□□□ 0.31
RABGGTA-203ENST00000543002 VPS35Q96QK1 796 aa16.99■□□□□ 0.31
RABGGTA-203ENST00000543002 FRMD8Q9BZ67 464 aaPredicted RBP16.99■□□□□ 0.31
RABGGTA-203ENST00000543002 TM7SF3Q9NS93 570 aa16.99■□□□□ 0.31
RABGGTA-203ENST00000543002 DNAJC28Q9NX36 388 aa16.99■□□□□ 0.31
RABGGTA-203ENST00000543002 FKBPLQ9UIM3 349 aa16.99■□□□□ 0.31
RABGGTA-203ENST00000543002 APPL1Q9UKG1 709 aa16.99■□□□□ 0.31
RABGGTA-203ENST00000543002 PNMA8BQ9ULN7 279 aaPredicted RBP16.99■□□□□ 0.31
RABGGTA-203ENST00000543002 TCAF1Q9Y4C2 921 aa16.99■□□□□ 0.31
RABGGTA-203ENST00000543002 TMEM131Q92545 1883 aa16.99■□□□□ 0.31
RABGGTA-203ENST00000543002 MYLKQ15746 1914 aa16.99■□□□□ 0.31
RABGGTA-203ENST00000543002 EFCAB8A8MWE9 144 aa16.98■□□□□ 0.31
RABGGTA-203ENST00000543002 GOLGA8MH3BSY2 632 aa16.98■□□□□ 0.31
RABGGTA-203ENST00000543002 H7C0S8 307 aa16.98■□□□□ 0.31
RABGGTA-203ENST00000543002 MGAT1P26572 445 aa16.98■□□□□ 0.31
RABGGTA-203ENST00000543002 HOXD11P31277 338 aaPredicted RBP16.98■□□□□ 0.31
RABGGTA-203ENST00000543002 SRP54P61011 504 aaKnown RBP16.98■□□□□ 0.31
RABGGTA-203ENST00000543002 HNRNPKP61978 463 aaKnown RBP eCLIP16.98■□□□□ 0.31
RABGGTA-203ENST00000543002 MRPS25P82663 173 aaKnown RBP16.98■□□□□ 0.31
RABGGTA-203ENST00000543002 TMPRSS15P98073 1019 aa16.98■□□□□ 0.31
RABGGTA-203ENST00000543002 XIAPP98170 497 aa16.98■□□□□ 0.31
RABGGTA-203ENST00000543002 PPARDQ03181 441 aa16.98■□□□□ 0.31
RABGGTA-203ENST00000543002 SLC14A1Q13336 389 aa16.98■□□□□ 0.31
RABGGTA-203ENST00000543002 ITGA9Q13797 1035 aa16.98■□□□□ 0.31
RABGGTA-203ENST00000543002 CHRNA6Q15825 494 aa16.98■□□□□ 0.31
RABGGTA-203ENST00000543002 SKIDA1Q1XH10 827 aa16.98■□□□□ 0.31
RABGGTA-203ENST00000543002 ALG11Q2TAA5 492 aa16.98■□□□□ 0.31
RABGGTA-203ENST00000543002 ATP13A5Q4VNC0 1218 aa16.98■□□□□ 0.31
RABGGTA-203ENST00000543002 ZNF542PQ5EBM4 170 aa16.98■□□□□ 0.31
RABGGTA-203ENST00000543002 TSTD2Q5T7W7 516 aa16.98■□□□□ 0.31
RABGGTA-203ENST00000543002 ARMC3Q5W041 872 aa16.98■□□□□ 0.31
RABGGTA-203ENST00000543002 FAM151BQ6UXP7 276 aa16.98■□□□□ 0.31
RABGGTA-203ENST00000543002 TRIM74Q86UV6 250 aa16.98■□□□□ 0.31
RABGGTA-203ENST00000543002 PPHLN1Q8NEY8 458 aaKnown RBP16.98■□□□□ 0.31
RABGGTA-203ENST00000543002 BTN2A2Q8WVV5 523 aa16.98■□□□□ 0.31
RABGGTA-203ENST00000543002 PEX13Q92968 403 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms