RNA–Protein interactions for RNA: ENST00000542838.5

DDX11-223, Transcript of DEAD/H-box helicase 11, human

APPRIS P1 TSL 1 (best) BASIC

Gene DDX11, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX11-223	ENST00000542838	UGT1A1	P22309	533 aa		12.88	□□□□□ -0.35
DDX11-223	ENST00000542838	UGT1A4	P22310	534 aa		12.88	□□□□□ -0.35
DDX11-223	ENST00000542838	FDXR	P22570	491 aa		12.88	□□□□□ -0.35
DDX11-223	ENST00000542838	HTR7	P34969	479 aa		12.88	□□□□□ -0.35
DDX11-223	ENST00000542838	UGT1A3	P35503	534 aa		12.88	□□□□□ -0.35
DDX11-223	ENST00000542838	UGT1A5	P35504	534 aa		12.88	□□□□□ -0.35
DDX11-223	ENST00000542838	KCNK10	P57789	538 aa		12.88	□□□□□ -0.35
DDX11-223	ENST00000542838	DSC2	Q02487	901 aa		12.88	□□□□□ -0.35
DDX11-223	ENST00000542838	TNK2	Q07912	1038 aa		12.88	□□□□□ -0.35
DDX11-223	ENST00000542838	EIF4EBP2	Q13542	120 aa	Predicted RBP	12.88	□□□□□ -0.35
DDX11-223	ENST00000542838	FSCN1	Q16658	493 aa	Known RBP	12.88	□□□□□ -0.35
DDX11-223	ENST00000542838	TBC1D21	Q8IYX1	336 aa		12.88	□□□□□ -0.35
DDX11-223	ENST00000542838	CASP10	Q92851	521 aa		12.88	□□□□□ -0.35
DDX11-223	ENST00000542838	PABPC5	Q96DU9	382 aa	Known RBP	12.88	□□□□□ -0.35
DDX11-223	ENST00000542838	MUC13	Q9H3R2	512 aa		12.88	□□□□□ -0.35
DDX11-223	ENST00000542838	SLC52A3	Q9NQ40	469 aa		12.88	□□□□□ -0.35
DDX11-223	ENST00000542838	CRCP	O75575	148 aa		12.88	□□□□□ -0.35
DDX11-223	ENST00000542838	ZBTB11	O95625	1053 aa	Predicted RBP	12.88	□□□□□ -0.35
DDX11-223	ENST00000542838	F2	P00734	622 aa		12.88	□□□□□ -0.35
DDX11-223	ENST00000542838	TH	P07101	528 aa		12.88	□□□□□ -0.35
DDX11-223	ENST00000542838	SLC2A3	P11169	496 aa		12.88	□□□□□ -0.35
DDX11-223	ENST00000542838	EEF1B2	P24534	225 aa	Known RBP	12.88	□□□□□ -0.35
DDX11-223	ENST00000542838	CASP2	P42575	452 aa		12.88	□□□□□ -0.35
DDX11-223	ENST00000542838	CRYBB1	P53674	252 aa	Predicted RBP	12.88	□□□□□ -0.35
DDX11-223	ENST00000542838	MFSD10	Q14728	455 aa		12.88	□□□□□ -0.35
DDX11-223	ENST00000542838	COQ5	Q5HYK3	327 aa		12.88	□□□□□ -0.35
DDX11-223	ENST00000542838	CCNYL2	Q5T2Q4	361 aa		12.88	□□□□□ -0.35
DDX11-223	ENST00000542838	AFMID	Q63HM1	303 aa		12.88	□□□□□ -0.35
DDX11-223	ENST00000542838	ZNF549	Q6P9A3	640 aa		12.88	□□□□□ -0.35
DDX11-223	ENST00000542838	C16orf87	Q6PH81	154 aa		12.88	□□□□□ -0.35
DDX11-223	ENST00000542838	ZNF467	Q7Z7K2	595 aa	Predicted RBP	12.88	□□□□□ -0.35
DDX11-223	ENST00000542838	ZBTB46	Q86UZ6	589 aa		12.88	□□□□□ -0.35
DDX11-223	ENST00000542838	TBATA	Q96M53	351 aa		12.88	□□□□□ -0.35
DDX11-223	ENST00000542838	YTHDF1	Q9BYJ9	559 aa	Known RBP	12.88	□□□□□ -0.35
DDX11-223	ENST00000542838	ABHD16B	Q9H3Z7	469 aa		12.88	□□□□□ -0.35
DDX11-223	ENST00000542838	MIOS	Q9NXC5	875 aa		12.88	□□□□□ -0.35
DDX11-223	ENST00000542838	IFT80	Q9P2H3	777 aa	Predicted RBP	12.88	□□□□□ -0.35
DDX11-223	ENST00000542838	OAS3	Q9Y6K5	1087 aa	Known RBP	12.88	□□□□□ -0.35
DDX11-223	ENST00000542838		A0A1W2PP18	115 aa		12.87	□□□□□ -0.35
DDX11-223	ENST00000542838	CASTOR2	A6NHX0	329 aa		12.87	□□□□□ -0.35
DDX11-223	ENST00000542838	UMPS	P11172	480 aa		12.87	□□□□□ -0.35
DDX11-223	ENST00000542838	CES1	P23141	567 aa		12.87	□□□□□ -0.35
DDX11-223	ENST00000542838	MAP4	P27816	1152 aa	Known RBP	12.87	□□□□□ -0.35
DDX11-223	ENST00000542838	MAGEA8	P43361	318 aa		12.87	□□□□□ -0.35
DDX11-223	ENST00000542838	HLCS	P50747	726 aa		12.87	□□□□□ -0.35
DDX11-223	ENST00000542838	RENBP	P51606	427 aa		12.87	□□□□□ -0.35
DDX11-223	ENST00000542838	ECT2L	Q008S8	904 aa		12.87	□□□□□ -0.35
DDX11-223	ENST00000542838	TRAF2	Q12933	501 aa		12.87	□□□□□ -0.35
DDX11-223	ENST00000542838	SPATS1	Q496A3	300 aa		12.87	□□□□□ -0.35
DDX11-223	ENST00000542838	PAGE3	Q5JUK9	113 aa		12.87	□□□□□ -0.35
DDX11-223	ENST00000542838	IQSEC1	Q6DN90	963 aa		12.87	□□□□□ -0.35
DDX11-223	ENST00000542838	ANKRD26P1	Q6NSI1	321 aa		12.87	□□□□□ -0.35
DDX11-223	ENST00000542838	TMEM74	Q96NL1	305 aa		12.87	□□□□□ -0.35
DDX11-223	ENST00000542838	SLC30A3	Q99726	388 aa		12.87	□□□□□ -0.35
DDX11-223	ENST00000542838	TRIM62	Q9BVG3	475 aa		12.87	□□□□□ -0.35
DDX11-223	ENST00000542838	PIF1	Q9H611	641 aa		12.87	□□□□□ -0.35
DDX11-223	ENST00000542838	ABCC13	Q9NSE7	274 aa		12.87	□□□□□ -0.35
DDX11-223	ENST00000542838	GPR45	Q9Y5Y3	372 aa		12.87	□□□□□ -0.35
DDX11-223	ENST00000542838	HS3ST4	Q9Y661	456 aa		12.87	□□□□□ -0.35
DDX11-223	ENST00000542838	KANSL1L	A0AUZ9	987 aa		12.87	□□□□□ -0.35
DDX11-223	ENST00000542838	MROH6	A6NGR9	719 aa		12.87	□□□□□ -0.35
DDX11-223	ENST00000542838		J3KR12	359 aa		12.87	□□□□□ -0.35
DDX11-223	ENST00000542838	DDN	O94850	711 aa	Predicted RBP	12.87	□□□□□ -0.35
DDX11-223	ENST00000542838	OCM2	P0CE71	109 aa		12.87	□□□□□ -0.35
DDX11-223	ENST00000542838	OCM	P0CE72	109 aa	Predicted RBP	12.87	□□□□□ -0.35
DDX11-223	ENST00000542838	MTHFD2	P13995	350 aa		12.87	□□□□□ -0.35
DDX11-223	ENST00000542838	ZNF182	P17025	639 aa	Predicted RBP	12.87	□□□□□ -0.35
DDX11-223	ENST00000542838	CCR3	P51677	355 aa		12.87	□□□□□ -0.35
DDX11-223	ENST00000542838	ADARB1	P78563	741 aa	Known RBP	12.87	□□□□□ -0.35
DDX11-223	ENST00000542838	SLC10A7	Q0GE19	358 aa		12.87	□□□□□ -0.35
DDX11-223	ENST00000542838	TIGD5	Q53EQ6	642 aa		12.87	□□□□□ -0.35
DDX11-223	ENST00000542838	FBXO48	Q5FWF7	155 aa		12.87	□□□□□ -0.35
DDX11-223	ENST00000542838	ARTN	Q5T4W7	220 aa		12.87	□□□□□ -0.35
DDX11-223	ENST00000542838	OGFOD2	Q6N063	350 aa		12.87	□□□□□ -0.35
DDX11-223	ENST00000542838	FAM117B	Q6P1L5	589 aa		12.87	□□□□□ -0.35
DDX11-223	ENST00000542838	TBPL2	Q6SJ96	375 aa		12.87	□□□□□ -0.35
DDX11-223	ENST00000542838	PTRH1	Q86Y79	214 aa	Known RBP	12.87	□□□□□ -0.35
DDX11-223	ENST00000542838	LRRC49	Q8IUZ0	686 aa		12.87	□□□□□ -0.35
DDX11-223	ENST00000542838	CDCA5	Q96FF9	252 aa		12.87	□□□□□ -0.35
DDX11-223	ENST00000542838	TEX37	Q96LM6	180 aa		12.87	□□□□□ -0.35
DDX11-223	ENST00000542838	RTP3	Q9BQQ7	232 aa		12.87	□□□□□ -0.35
DDX11-223	ENST00000542838	PAAF1	Q9BRP4	392 aa		12.87	□□□□□ -0.35
DDX11-223	ENST00000542838	ZFYVE28	Q9HCC9	887 aa		12.87	□□□□□ -0.35
DDX11-223	ENST00000542838	SEMA4B	Q9NPR2	832 aa	Predicted RBP	12.87	□□□□□ -0.35
DDX11-223	ENST00000542838	TMLHE	Q9NVH6	421 aa		12.87	□□□□□ -0.35
DDX11-223	ENST00000542838	USP22	Q9UPT9	525 aa		12.87	□□□□□ -0.35
DDX11-223	ENST00000542838	TIMM22	Q9Y584	194 aa		12.87	□□□□□ -0.35
DDX11-223	ENST00000542838		A0A1B0GTL3	188 aa		12.87	□□□□□ -0.35
DDX11-223	ENST00000542838	SUPT3H	B4E1H0	165 aa		12.87	□□□□□ -0.35
DDX11-223	ENST00000542838	GLP2R	O95838	553 aa		12.87	□□□□□ -0.35
DDX11-223	ENST00000542838	PEX11B	O96011	259 aa		12.87	□□□□□ -0.35
DDX11-223	ENST00000542838	ALB	P02768	609 aa		12.87	□□□□□ -0.35
DDX11-223	ENST00000542838	INHBB	P09529	407 aa		12.87	□□□□□ -0.35
DDX11-223	ENST00000542838	EEF1D	P29692	281 aa	Known RBP	12.87	□□□□□ -0.35
DDX11-223	ENST00000542838	CLC	Q05315	142 aa		12.87	□□□□□ -0.35
DDX11-223	ENST00000542838	MOG	Q16653	247 aa		12.87	□□□□□ -0.35
DDX11-223	ENST00000542838	ZIK1	Q3SY52	487 aa	Predicted RBP	12.87	□□□□□ -0.35
DDX11-223	ENST00000542838	AASDH	Q4L235	1098 aa	Predicted RBP	12.87	□□□□□ -0.35
DDX11-223	ENST00000542838	SIRPB2	Q5JXA9	342 aa		12.87	□□□□□ -0.35
DDX11-223	ENST00000542838	OTUD3	Q5T2D3	398 aa	Predicted RBP	12.87	□□□□□ -0.35

Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms