RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 CCDC167Q9P0B6 97 aa6.53□□□□□ -1.36
PTPRO-208ENST00000542557 CROTQ9UKG9 612 aa6.53□□□□□ -1.36
PTPRO-208ENST00000542557 PHF24Q9UPV7 400 aa6.53□□□□□ -1.36
PTPRO-208ENST00000542557 MED16Q9Y2X0 877 aa6.53□□□□□ -1.36
PTPRO-208ENST00000542557 DNAJC15Q9Y5T4 150 aa6.53□□□□□ -1.36
PTPRO-208ENST00000542557 OAS3Q9Y6K5 1087 aaKnown RBP6.53□□□□□ -1.36
PTPRO-208ENST00000542557 ZFP37Q9Y6Q3 630 aaPredicted RBP6.53□□□□□ -1.36
PTPRO-208ENST00000542557 C15orf38-AP3S2A0A0A6YYH1 394 aa6.52□□□□□ -1.37
PTPRO-208ENST00000542557 A0A1B0GVM2 712 aa6.52□□□□□ -1.37
PTPRO-208ENST00000542557 TCRBV3S1A0A5B6 114 aa6.52□□□□□ -1.37
PTPRO-208ENST00000542557 C2orf81A6NN90 581 aa6.52□□□□□ -1.37
PTPRO-208ENST00000542557 PFDN6O15212 129 aa6.52□□□□□ -1.37
PTPRO-208ENST00000542557 KLK8O60259 260 aa6.52□□□□□ -1.37
PTPRO-208ENST00000542557 RHOBTB1O94844 696 aa6.52□□□□□ -1.37
PTPRO-208ENST00000542557 EFEMP2O95967 443 aa6.52□□□□□ -1.37
PTPRO-208ENST00000542557 RHOCP08134 193 aa6.52□□□□□ -1.37
PTPRO-208ENST00000542557 ALDOCP09972 364 aaKnown RBP6.52□□□□□ -1.37
PTPRO-208ENST00000542557 HOXD10P28358 340 aa6.52□□□□□ -1.37
PTPRO-208ENST00000542557 RGRP47804 291 aa6.52□□□□□ -1.37
PTPRO-208ENST00000542557 TUFMP49411 452 aaKnown RBP6.52□□□□□ -1.37
PTPRO-208ENST00000542557 CCNHP51946 323 aaPredicted RBP6.52□□□□□ -1.37
PTPRO-208ENST00000542557 RAD51Q06609 339 aa6.52□□□□□ -1.37
PTPRO-208ENST00000542557 PTPRCAPQ14761 206 aa6.52□□□□□ -1.37
PTPRO-208ENST00000542557 GPNMBQ14956 572 aa6.52□□□□□ -1.37
PTPRO-208ENST00000542557 SPATS1Q496A3 300 aa6.52□□□□□ -1.37
PTPRO-208ENST00000542557 LIN52Q52LA3 116 aa6.52□□□□□ -1.37
PTPRO-208ENST00000542557 PAOXQ6QHF9 649 aa6.52□□□□□ -1.37
PTPRO-208ENST00000542557 ZNF783Q6ZMS7 281 aa6.52□□□□□ -1.37
PTPRO-208ENST00000542557 EFL1Q7Z2Z2 1120 aaKnown RBP6.52□□□□□ -1.37
PTPRO-208ENST00000542557 GLT6D1Q7Z4J2 308 aa6.52□□□□□ -1.37
PTPRO-208ENST00000542557 ARPINQ7Z6K5 226 aa6.52□□□□□ -1.37
PTPRO-208ENST00000542557 SPATA24Q86W54 205 aa6.52□□□□□ -1.37
PTPRO-208ENST00000542557 SPNS2Q8IVW8 549 aa6.52□□□□□ -1.37
PTPRO-208ENST00000542557 CFAP52Q8N1V2 620 aa6.52□□□□□ -1.37
PTPRO-208ENST00000542557 NKAPQ8N5F7 415 aaKnown RBP6.52□□□□□ -1.37
PTPRO-208ENST00000542557 PCDH20Q8N6Y1 951 aaKnown RBP6.52□□□□□ -1.37
PTPRO-208ENST00000542557 RNF148Q8N7C7 305 aa6.52□□□□□ -1.37
PTPRO-208ENST00000542557 DBF4BQ8NFT6 615 aa6.52□□□□□ -1.37
PTPRO-208ENST00000542557 SEPT8Q92599 483 aa6.52□□□□□ -1.37
PTPRO-208ENST00000542557 C3orf30Q96M34 536 aa6.52□□□□□ -1.37
PTPRO-208ENST00000542557 UHRF1Q96T88 793 aaPredicted RBP6.52□□□□□ -1.37
PTPRO-208ENST00000542557 PKP2Q99959 881 aa6.52□□□□□ -1.37
PTPRO-208ENST00000542557 DDX50Q9BQ39 737 aaKnown RBP6.52□□□□□ -1.37
PTPRO-208ENST00000542557 NUSAP1Q9BXS6 441 aaKnown RBP6.52□□□□□ -1.37
PTPRO-208ENST00000542557 CCDC68Q9H2F9 335 aa6.52□□□□□ -1.37
PTPRO-208ENST00000542557 AKTIPQ9H8T0 292 aa6.52□□□□□ -1.37
PTPRO-208ENST00000542557 COPS7BQ9H9Q2 264 aaPredicted RBP6.52□□□□□ -1.37
PTPRO-208ENST00000542557 HSFX1Q9UBD0 423 aa6.52□□□□□ -1.37
PTPRO-208ENST00000542557 ABCD2Q9UBJ2 740 aa6.52□□□□□ -1.37
PTPRO-208ENST00000542557 MTRRQ9UBK8 725 aa6.52□□□□□ -1.37
PTPRO-208ENST00000542557 LRFN2Q9ULH4 789 aa6.52□□□□□ -1.37
PTPRO-208ENST00000542557 ABT1Q9ULW3 272 aaKnown RBP6.52□□□□□ -1.37
PTPRO-208ENST00000542557 SPO11Q9Y5K1 396 aa6.52□□□□□ -1.37
PTPRO-208ENST00000542557 BACE2Q9Y5Z0 518 aa6.52□□□□□ -1.37
PTPRO-208ENST00000542557 ZNF840PA6NDX5 716 aa6.52□□□□□ -1.37
PTPRO-208ENST00000542557 PRORSD1PA6NEY8 169 aa6.52□□□□□ -1.37
PTPRO-208ENST00000542557 H7C0S8 307 aa6.52□□□□□ -1.37
PTPRO-208ENST00000542557 DNAJA2O60884 412 aa6.52□□□□□ -1.37
PTPRO-208ENST00000542557 CLASP2O75122 1294 aaKnown RBP6.52□□□□□ -1.37
PTPRO-208ENST00000542557 PRLP01236 227 aa6.52□□□□□ -1.37
PTPRO-208ENST00000542557 PYGLP06737 847 aa6.52□□□□□ -1.37
PTPRO-208ENST00000542557 GFAPP14136 432 aa6.52□□□□□ -1.37
PTPRO-208ENST00000542557 ARSAP15289 507 aa6.52□□□□□ -1.37
PTPRO-208ENST00000542557 GATMP50440 423 aa6.52□□□□□ -1.37
PTPRO-208ENST00000542557 FOXM1Q08050 763 aa6.52□□□□□ -1.37
PTPRO-208ENST00000542557 TLR1Q15399 786 aa6.52□□□□□ -1.37
PTPRO-208ENST00000542557 PFKFB4Q16877 469 aa6.52□□□□□ -1.37
PTPRO-208ENST00000542557 PABPC1LQ4VXU2 614 aaKnown RBP6.52□□□□□ -1.37
PTPRO-208ENST00000542557 SETMARQ53H47 684 aaPredicted RBP6.52□□□□□ -1.37
PTPRO-208ENST00000542557 HECTD3Q5T447 861 aa6.52□□□□□ -1.37
PTPRO-208ENST00000542557 LHX8Q68G74 356 aa6.52□□□□□ -1.37
PTPRO-208ENST00000542557 OGFOD2Q6N063 350 aa6.52□□□□□ -1.37
PTPRO-208ENST00000542557 TXNDC11Q6PKC3 985 aa6.52□□□□□ -1.37
PTPRO-208ENST00000542557 FUNDC1Q8IVP5 155 aa6.52□□□□□ -1.37
PTPRO-208ENST00000542557 LRRC43Q8N309 656 aa6.52□□□□□ -1.37
PTPRO-208ENST00000542557 FBXO39Q8N4B4 442 aa6.52□□□□□ -1.37
PTPRO-208ENST00000542557 FBXO22Q8NEZ5 403 aa6.52□□□□□ -1.37
PTPRO-208ENST00000542557 ADAMTS19Q8TE59 1207 aa6.52□□□□□ -1.37
PTPRO-208ENST00000542557 TSPEARQ8WU66 669 aa6.52□□□□□ -1.37
PTPRO-208ENST00000542557 ZFAND2BQ8WV99 257 aa6.52□□□□□ -1.37
PTPRO-208ENST00000542557 EXT2Q93063 718 aa6.52□□□□□ -1.37
PTPRO-208ENST00000542557 NSMCE3Q96MG7 304 aa6.52□□□□□ -1.37
PTPRO-208ENST00000542557 GCNAQ96QF7 691 aa6.52□□□□□ -1.37
PTPRO-208ENST00000542557 HOPXQ9BPY8 73 aaPredicted RBP6.52□□□□□ -1.37
PTPRO-208ENST00000542557 GPATCH1Q9BRR8 931 aaKnown RBP6.52□□□□□ -1.37
PTPRO-208ENST00000542557 EPB41L1Q9H4G0 881 aa6.52□□□□□ -1.37
PTPRO-208ENST00000542557 MID1IP1Q9NPA3 183 aa6.52□□□□□ -1.37
PTPRO-208ENST00000542557 SCUBE2Q9NQ36 999 aa6.52□□□□□ -1.37
PTPRO-208ENST00000542557 PLK2Q9NYY3 685 aa6.52□□□□□ -1.37
PTPRO-208ENST00000542557 AGO1Q9UL18 857 aaKnown RBP6.52□□□□□ -1.37
PTPRO-208ENST00000542557 RNF112Q9ULX5 631 aa6.52□□□□□ -1.37
PTPRO-208ENST00000542557 NDUFAF1Q9Y375 327 aa6.52□□□□□ -1.37
PTPRO-208ENST00000542557 HTTP42858 3142 aa6.52□□□□□ -1.37
PTPRO-208ENST00000542557 TANC1Q9C0D5 1861 aa6.52□□□□□ -1.37
PTPRO-208ENST00000542557 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.51□□□□□ -1.37
PTPRO-208ENST00000542557 A0A0J9YYE9 177 aa6.51□□□□□ -1.37
PTPRO-208ENST00000542557 UBA6A0AVT1 1052 aaPredicted RBP6.51□□□□□ -1.37
PTPRO-208ENST00000542557 PITPNM1O00562 1244 aa6.51□□□□□ -1.37
PTPRO-208ENST00000542557 TXNDC9O14530 226 aa6.51□□□□□ -1.37
PTPRO-208ENST00000542557 PIP5K1BO14986 540 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms