RNA–Protein interactions for RNA: ENST00000542230.6

TMEM50B-210, Transcript of transmembrane protein 50B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50B, Length 2,375 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-210ENST00000542230 HS3ST2Q9Y278 367 aa17.18■□□□□ 0.34
TMEM50B-210ENST00000542230 FIS1Q9Y3D6 152 aa17.18■□□□□ 0.34
TMEM50B-210ENST00000542230 CFAP73A6NFT4 308 aa17.18■□□□□ 0.34
TMEM50B-210ENST00000542230 PPP6CO00743 305 aa17.18■□□□□ 0.34
TMEM50B-210ENST00000542230 IGSF6O95976 241 aa17.18■□□□□ 0.34
TMEM50B-210ENST00000542230 SUOXP51687 545 aa17.18■□□□□ 0.34
TMEM50B-210ENST00000542230 CCNHP51946 323 aaPredicted RBP17.18■□□□□ 0.34
TMEM50B-210ENST00000542230 PDAP1Q13442 181 aaKnown RBP17.18■□□□□ 0.34
TMEM50B-210ENST00000542230 MYLK3Q32MK0 819 aa17.18■□□□□ 0.34
TMEM50B-210ENST00000542230 PHTF2Q8N3S3 785 aa17.18■□□□□ 0.34
TMEM50B-210ENST00000542230 SCG3Q8WXD2 468 aaKnown RBP17.18■□□□□ 0.34
TMEM50B-210ENST00000542230 ATP13A3Q9H7F0 1226 aa17.18■□□□□ 0.34
TMEM50B-210ENST00000542230 ZFYVE1Q9HBF4 777 aa17.18■□□□□ 0.34
TMEM50B-210ENST00000542230 INTS10Q9NVR2 710 aaKnown RBP17.18■□□□□ 0.34
TMEM50B-210ENST00000542230 MID2Q9UJV3 735 aa17.18■□□□□ 0.34
TMEM50B-210ENST00000542230 APOBEC2Q9Y235 224 aaKnown RBP17.18■□□□□ 0.34
TMEM50B-210ENST00000542230 UBXN8O00124 270 aa17.17■□□□□ 0.34
TMEM50B-210ENST00000542230 MATN2O00339 956 aa17.17■□□□□ 0.34
TMEM50B-210ENST00000542230 SIX3O95343 332 aaPredicted RBP17.17■□□□□ 0.34
TMEM50B-210ENST00000542230 UGT2B4P06133 528 aa17.17■□□□□ 0.34
TMEM50B-210ENST00000542230 PFKLP17858 780 aa17.17■□□□□ 0.34
TMEM50B-210ENST00000542230 HOXA9P31269 272 aa17.17■□□□□ 0.34
TMEM50B-210ENST00000542230 NRIP1P48552 1158 aa17.17■□□□□ 0.34
TMEM50B-210ENST00000542230 PRKAA2P54646 552 aa17.17■□□□□ 0.34
TMEM50B-210ENST00000542230 LONP2Q86WA8 852 aa17.17■□□□□ 0.34
TMEM50B-210ENST00000542230 C12orf40Q86WS4 652 aa17.17■□□□□ 0.34
TMEM50B-210ENST00000542230 POU5F2Q8N7G0 328 aa17.17■□□□□ 0.34
TMEM50B-210ENST00000542230 GRIN3AQ8TCU5 1115 aa17.17■□□□□ 0.34
TMEM50B-210ENST00000542230 IL26Q9NPH9 171 aa17.17■□□□□ 0.34
TMEM50B-210ENST00000542230 G3BP2Q9UN86 482 aaKnown RBP17.17■□□□□ 0.34
TMEM50B-210ENST00000542230 RAP2CQ9Y3L5 183 aa17.17■□□□□ 0.34
TMEM50B-210ENST00000542230 RWDD3Q9Y3V2 267 aa17.17■□□□□ 0.34
TMEM50B-210ENST00000542230 PKP3Q9Y446 797 aa17.17■□□□□ 0.34
TMEM50B-210ENST00000542230 OTOL1A6NHN0 477 aaPredicted RBP17.17■□□□□ 0.34
TMEM50B-210ENST00000542230 EPOPA6NHQ4 379 aa17.17■□□□□ 0.34
TMEM50B-210ENST00000542230 MGRN1O60291 552 aa17.17■□□□□ 0.34
TMEM50B-210ENST00000542230 IPO13O94829 963 aaKnown RBP17.17■□□□□ 0.34
TMEM50B-210ENST00000542230 SERPINA6P08185 405 aa17.17■□□□□ 0.34
TMEM50B-210ENST00000542230 HNRNPA1P09651 372 aaKnown RBP eCLIP17.17■□□□□ 0.34
TMEM50B-210ENST00000542230 BPIP17213 487 aa17.17■□□□□ 0.34
TMEM50B-210ENST00000542230 DDX6P26196 483 aaKnown RBP eCLIP17.17■□□□□ 0.34
TMEM50B-210ENST00000542230 RPL14P50914 215 aaKnown RBP17.17■□□□□ 0.34
TMEM50B-210ENST00000542230 ECT2LQ008S8 904 aa17.17■□□□□ 0.34
TMEM50B-210ENST00000542230 PDCD2Q16342 344 aaPredicted RBP17.17■□□□□ 0.34
TMEM50B-210ENST00000542230 SPDYAQ5MJ70 313 aa17.17■□□□□ 0.34
TMEM50B-210ENST00000542230 KLC3Q6P597 504 aa17.17■□□□□ 0.34
TMEM50B-210ENST00000542230 CLDN19Q8N6F1 224 aa17.17■□□□□ 0.34
TMEM50B-210ENST00000542230 SREK1Q8WXA9 508 aaKnown RBP17.17■□□□□ 0.34
TMEM50B-210ENST00000542230 SMG7Q92540 1137 aaKnown RBP17.17■□□□□ 0.34
TMEM50B-210ENST00000542230 CADM1Q9BY67 442 aaKnown RBP17.17■□□□□ 0.34
TMEM50B-210ENST00000542230 PIDD1Q9HB75 910 aa17.17■□□□□ 0.34
TMEM50B-210ENST00000542230 SARS2Q9NP81 518 aaKnown RBP17.17■□□□□ 0.34
TMEM50B-210ENST00000542230 DNAJC28Q9NX36 388 aa17.17■□□□□ 0.34
TMEM50B-210ENST00000542230 TAS2R1Q9NYW7 299 aa17.17■□□□□ 0.34
TMEM50B-210ENST00000542230 TTC34A8MYJ7 566 aa17.16■□□□□ 0.34
TMEM50B-210ENST00000542230 RFXAPO00287 272 aa17.16■□□□□ 0.34
TMEM50B-210ENST00000542230 CDC7O00311 574 aa17.16■□□□□ 0.34
TMEM50B-210ENST00000542230 UBFD1O14562 309 aaKnown RBP17.16■□□□□ 0.34
TMEM50B-210ENST00000542230 PRAMEF1O95521 474 aa17.16■□□□□ 0.34
TMEM50B-210ENST00000542230 ESRRAP11474 423 aaPredicted RBP17.16■□□□□ 0.34
TMEM50B-210ENST00000542230 MTHFD2P13995 350 aa17.16■□□□□ 0.34
TMEM50B-210ENST00000542230 NCF2P19878 526 aaPredicted RBP17.16■□□□□ 0.34
TMEM50B-210ENST00000542230 CDH13P55290 713 aa17.16■□□□□ 0.34
TMEM50B-210ENST00000542230 KRT72Q14CN4 511 aa17.16■□□□□ 0.34
TMEM50B-210ENST00000542230 CFAP157Q5JU67 520 aa17.16■□□□□ 0.34
TMEM50B-210ENST00000542230 TMEM198Q66K66 360 aa17.16■□□□□ 0.34
TMEM50B-210ENST00000542230 KDM1BQ8NB78 822 aa17.16■□□□□ 0.34
TMEM50B-210ENST00000542230 ANTXRLA6NF34 631 aa17.16■□□□□ 0.34
TMEM50B-210ENST00000542230 H7C0S8 307 aa17.16■□□□□ 0.34
TMEM50B-210ENST00000542230 ATP5HO75947 161 aa17.16■□□□□ 0.34
TMEM50B-210ENST00000542230 RB1P06400 928 aa17.16■□□□□ 0.34
TMEM50B-210ENST00000542230 RBP1P09455 135 aa17.16■□□□□ 0.34
TMEM50B-210ENST00000542230 ITGB6P18564 788 aa17.16■□□□□ 0.34
TMEM50B-210ENST00000542230 LHCGRP22888 699 aa17.16■□□□□ 0.34
TMEM50B-210ENST00000542230 PTPN4P29074 926 aa17.16■□□□□ 0.34
TMEM50B-210ENST00000542230 POM121L1PQ3SYA9 428 aa17.16■□□□□ 0.34
TMEM50B-210ENST00000542230 RALGPS1Q5JS13 557 aa17.16■□□□□ 0.34
TMEM50B-210ENST00000542230 SH2D4BQ5SQS7 431 aa17.16■□□□□ 0.34
TMEM50B-210ENST00000542230 CRTC1Q6UUV9 634 aa17.16■□□□□ 0.34
TMEM50B-210ENST00000542230 PARP9Q8IXQ6 854 aa17.16■□□□□ 0.34
TMEM50B-210ENST00000542230 GDPD5Q8WTR4 605 aa17.16■□□□□ 0.34
TMEM50B-210ENST00000542230 HACD3Q9P035 362 aa17.16■□□□□ 0.34
TMEM50B-210ENST00000542230 LNPEPQ9UIQ6 1025 aa17.16■□□□□ 0.34
TMEM50B-210ENST00000542230 PRSS21Q9Y6M0 314 aa17.16■□□□□ 0.34
TMEM50B-210ENST00000542230 ATG2AQ2TAZ0 1938 aa17.15■□□□□ 0.34
TMEM50B-210ENST00000542230 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.15■□□□□ 0.34
TMEM50B-210ENST00000542230 MEI4A8MW99 385 aa17.15■□□□□ 0.34
TMEM50B-210ENST00000542230 H2AFYO75367 372 aaKnown RBP17.15■□□□□ 0.34
TMEM50B-210ENST00000542230 TSPAN12O95859 305 aa17.15■□□□□ 0.34
TMEM50B-210ENST00000542230 PKMP14618 531 aaKnown RBP17.15■□□□□ 0.34
TMEM50B-210ENST00000542230 SERPINA4P29622 427 aa17.15■□□□□ 0.34
TMEM50B-210ENST00000542230 CSNK1DP48730 415 aa17.15■□□□□ 0.34
TMEM50B-210ENST00000542230 SNRPD1P62314 119 aaKnown RBP17.15■□□□□ 0.34
TMEM50B-210ENST00000542230 SLC20A2Q08357 652 aa17.15■□□□□ 0.34
TMEM50B-210ENST00000542230 TSNQ15631 228 aaKnown RBP17.15■□□□□ 0.34
TMEM50B-210ENST00000542230 NAIF1Q69YI7 327 aaPredicted RBP17.15■□□□□ 0.34
TMEM50B-210ENST00000542230 OR2A12Q8NGT7 310 aa17.15■□□□□ 0.34
TMEM50B-210ENST00000542230 EEF1AKMT1Q8WVE0 214 aa17.15■□□□□ 0.34
TMEM50B-210ENST00000542230 MARK4Q96L34 752 aa17.15■□□□□ 0.34
TMEM50B-210ENST00000542230 CCDC68Q9H2F9 335 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms