RNA–Protein interactions for RNA: ENST00000542112.5

SNHG1-219, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 780 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-219ENST00000542112 NIM1KQ8IY84 436 aa4.34□□□□□ -1.71
SNHG1-219ENST00000542112 CPXCR1Q8N123 301 aa4.34□□□□□ -1.71
SNHG1-219ENST00000542112 PARP8Q8N3A8 854 aa4.34□□□□□ -1.71
SNHG1-219ENST00000542112 ZCCHC7Q8N3Z6 543 aaKnown RBP4.34□□□□□ -1.71
SNHG1-219ENST00000542112 ANKRD13CQ8N6S4 541 aa4.34□□□□□ -1.71
SNHG1-219ENST00000542112 CCDC185Q8N715 623 aa4.34□□□□□ -1.71
SNHG1-219ENST00000542112 ZNF655Q8N720 491 aaPredicted RBP4.34□□□□□ -1.71
SNHG1-219ENST00000542112 ANKFN1Q8N957 763 aa4.34□□□□□ -1.71
SNHG1-219ENST00000542112 NAT8LQ8N9F0 302 aa4.34□□□□□ -1.71
SNHG1-219ENST00000542112 KDM1BQ8NB78 822 aa4.34□□□□□ -1.71
SNHG1-219ENST00000542112 KYQ8NBH2 561 aa4.34□□□□□ -1.71
SNHG1-219ENST00000542112 DAGLBQ8NCG7 672 aa4.34□□□□□ -1.71
SNHG1-219ENST00000542112 SETD6Q8TBK2 473 aa4.34□□□□□ -1.71
SNHG1-219ENST00000542112 METTL6Q8TCB7 284 aa4.34□□□□□ -1.71
SNHG1-219ENST00000542112 URGCPQ8TCY9 931 aa4.34□□□□□ -1.71
SNHG1-219ENST00000542112 TCP10LQ8TDR4 215 aa4.34□□□□□ -1.71
SNHG1-219ENST00000542112 DENND1AQ8TEH3 1009 aa4.34□□□□□ -1.71
SNHG1-219ENST00000542112 BTN2A2Q8WVV5 523 aa4.34□□□□□ -1.71
SNHG1-219ENST00000542112 DNAJA4Q8WW22 397 aaPredicted RBP4.34□□□□□ -1.71
SNHG1-219ENST00000542112 RFFLQ8WZ73 363 aa4.34□□□□□ -1.71
SNHG1-219ENST00000542112 MARC2Q969Z3 335 aa4.34□□□□□ -1.71
SNHG1-219ENST00000542112 PPWD1Q96BP3 646 aaKnown RBP4.34□□□□□ -1.71
SNHG1-219ENST00000542112 MFSD3Q96ES6 412 aa4.34□□□□□ -1.71
SNHG1-219ENST00000542112 HES6Q96HZ4 224 aa4.34□□□□□ -1.71
SNHG1-219ENST00000542112 VPS39Q96JC1 886 aa4.34□□□□□ -1.71
SNHG1-219ENST00000542112 RADILQ96JH8 1075 aa4.34□□□□□ -1.71
SNHG1-219ENST00000542112 HEXIM2Q96MH2 286 aaKnown RBP4.34□□□□□ -1.71
SNHG1-219ENST00000542112 PANX3Q96QZ0 392 aa4.34□□□□□ -1.71
SNHG1-219ENST00000542112 SORT1Q99523 831 aa4.34□□□□□ -1.71
SNHG1-219ENST00000542112 C12orf57Q99622 126 aa4.34□□□□□ -1.71
SNHG1-219ENST00000542112 APOL4Q9BPW4 351 aa4.34□□□□□ -1.71
SNHG1-219ENST00000542112 DBNDD2Q9BQY9 259 aa4.34□□□□□ -1.71
SNHG1-219ENST00000542112 ZNF251Q9BRH9 671 aa4.34□□□□□ -1.71
SNHG1-219ENST00000542112 FAM213AQ9BRX8 229 aa4.34□□□□□ -1.71
SNHG1-219ENST00000542112 FSD1Q9BTV5 496 aa4.34□□□□□ -1.71
SNHG1-219ENST00000542112 GTPBP2Q9BX10 602 aaKnown RBP4.34□□□□□ -1.71
SNHG1-219ENST00000542112 ANKRD60Q9BZ19 345 aa4.34□□□□□ -1.71
SNHG1-219ENST00000542112 GPR61Q9BZJ8 451 aa4.34□□□□□ -1.71
SNHG1-219ENST00000542112 ABCG8Q9H221 673 aa4.34□□□□□ -1.71
SNHG1-219ENST00000542112 NKX2-4Q9H2Z4 354 aa4.34□□□□□ -1.71
SNHG1-219ENST00000542112 C11orf49Q9H6J7 331 aa4.34□□□□□ -1.71
SNHG1-219ENST00000542112 TDRD3Q9H7E2 651 aaKnown RBP4.34□□□□□ -1.71
SNHG1-219ENST00000542112 NMUR1Q9HB89 426 aa4.34□□□□□ -1.71
SNHG1-219ENST00000542112 KCNK9Q9NPC2 374 aa4.34□□□□□ -1.71
SNHG1-219ENST00000542112 CD320Q9NPF0 282 aa4.34□□□□□ -1.71
SNHG1-219ENST00000542112 AKIP1Q9NQ31 210 aa4.34□□□□□ -1.71
SNHG1-219ENST00000542112 CNNM1Q9NRU3 951 aa4.34□□□□□ -1.71
SNHG1-219ENST00000542112 GPATCH2Q9NW75 528 aa4.34□□□□□ -1.71
SNHG1-219ENST00000542112 WWOXQ9NZC7 414 aa4.34□□□□□ -1.71
SNHG1-219ENST00000542112 PTTG3PQ9NZH4 202 aa4.34□□□□□ -1.71
SNHG1-219ENST00000542112 SH3BGRL2Q9UJC5 107 aa4.34□□□□□ -1.71
SNHG1-219ENST00000542112 MID2Q9UJV3 735 aa4.34□□□□□ -1.71
SNHG1-219ENST00000542112 ANAPC2Q9UJX6 822 aa4.34□□□□□ -1.71
SNHG1-219ENST00000542112 VPS28Q9UK41 221 aa4.34□□□□□ -1.71
SNHG1-219ENST00000542112 FBXO10Q9UK96 956 aa4.34□□□□□ -1.71
SNHG1-219ENST00000542112 RNF112Q9ULX5 631 aa4.34□□□□□ -1.71
SNHG1-219ENST00000542112 PRPF19Q9UMS4 504 aaKnown RBP4.34□□□□□ -1.71
SNHG1-219ENST00000542112 ERVK-19Q9WJR5 959 aa4.34□□□□□ -1.71
SNHG1-219ENST00000542112 PCDHA3Q9Y5H8 950 aa4.34□□□□□ -1.71
SNHG1-219ENST00000542112 CLIC4Q9Y696 253 aa4.34□□□□□ -1.71
SNHG1-219ENST00000542112 AP1M2Q9Y6Q5 423 aa4.34□□□□□ -1.71
SNHG1-219ENST00000542112 CNTNAP4Q9C0A0 1308 aa4.34□□□□□ -1.71
SNHG1-219ENST00000542112 SHANK3Q9BYB0 1731 aa4.34□□□□□ -1.71
SNHG1-219ENST00000542112 N4BP2Q86UW6 1770 aaPredicted RBP4.34□□□□□ -1.71
SNHG1-219ENST00000542112 SCN11AQ9UI33 1791 aa4.34□□□□□ -1.71
SNHG1-219ENST00000542112 MYH11P35749 1972 aa4.33□□□□□ -1.72
SNHG1-219ENST00000542112 KDM3BQ7LBC6 1761 aa4.33□□□□□ -1.72
SNHG1-219ENST00000542112 PXDNQ92626 1479 aa4.33□□□□□ -1.72
SNHG1-219ENST00000542112 C10orf71Q711Q0 1435 aa4.33□□□□□ -1.72
SNHG1-219ENST00000542112 UTYO14607 1347 aa4.33□□□□□ -1.72
SNHG1-219ENST00000542112 ASTN2O75129 1339 aaPredicted RBP4.33□□□□□ -1.72
SNHG1-219ENST00000542112 TNKSO95271 1327 aa4.33□□□□□ -1.72
SNHG1-219ENST00000542112 A0A087WWV3 80 aa4.33□□□□□ -1.72
SNHG1-219ENST00000542112 GSTTP1A0A1W2PQM5 241 aa4.33□□□□□ -1.72
SNHG1-219ENST00000542112 CCDC78A2IDD5 438 aa4.33□□□□□ -1.72
SNHG1-219ENST00000542112 PDZK1P1A8MUH7 402 aa4.33□□□□□ -1.72
SNHG1-219ENST00000542112 LEUTXA8MZ59 168 aa4.33□□□□□ -1.72
SNHG1-219ENST00000542112 KRBOX1C9JBD0 128 aa4.33□□□□□ -1.72
SNHG1-219ENST00000542112 H0YCG3 227 aa4.33□□□□□ -1.72
SNHG1-219ENST00000542112 TRIM38O00635 465 aa4.33□□□□□ -1.72
SNHG1-219ENST00000542112 TOR1BO14657 336 aa4.33□□□□□ -1.72
SNHG1-219ENST00000542112 SYN3O14994 580 aa4.33□□□□□ -1.72
SNHG1-219ENST00000542112 CASC3O15234 703 aaKnown RBP4.33□□□□□ -1.72
SNHG1-219ENST00000542112 STX7O15400 261 aaKnown RBP4.33□□□□□ -1.72
SNHG1-219ENST00000542112 DAPK3O43293 454 aa4.33□□□□□ -1.72
SNHG1-219ENST00000542112 TBX1O43435 398 aa4.33□□□□□ -1.72
SNHG1-219ENST00000542112 CHMP2AO43633 222 aa4.33□□□□□ -1.72
SNHG1-219ENST00000542112 CIDEAO60543 219 aa4.33□□□□□ -1.72
SNHG1-219ENST00000542112 CST8O60676 142 aa4.33□□□□□ -1.72
SNHG1-219ENST00000542112 PRKD3O94806 890 aa4.33□□□□□ -1.72
SNHG1-219ENST00000542112 SEMA3DO95025 777 aa4.33□□□□□ -1.72
SNHG1-219ENST00000542112 CCNB2O95067 398 aa4.33□□□□□ -1.72
SNHG1-219ENST00000542112 PIGNO95427 931 aa4.33□□□□□ -1.72
SNHG1-219ENST00000542112 CPNE6O95741 557 aa4.33□□□□□ -1.72
SNHG1-219ENST00000542112 TSPAN12O95859 305 aa4.33□□□□□ -1.72
SNHG1-219ENST00000542112 SCG5P05408 212 aa4.33□□□□□ -1.72
SNHG1-219ENST00000542112 RB1P06400 928 aa4.33□□□□□ -1.72
SNHG1-219ENST00000542112 CDK1P06493 297 aa4.33□□□□□ -1.72
SNHG1-219ENST00000542112 SNRPB2P08579 225 aaKnown RBP4.33□□□□□ -1.72
SNHG1-219ENST00000542112 HOXD4P09016 255 aaPredicted RBP4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms