RNA–Protein interactions for RNA: ENST00000541371.5

PRPF19-206, Transcript of pre-mRNA processing factor 19, humanhuman

TSL 3

Gene PRPF19, Length 943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19-206ENST00000541371 NKD1Q969G9 470 aa13.15□□□□□ -0.3
PRPF19-206ENST00000541371 SMIM14Q96QK8 99 aa13.15□□□□□ -0.3
PRPF19-206ENST00000541371 SLC38A3Q99624 504 aa13.15□□□□□ -0.3
PRPF19-206ENST00000541371 NUP85Q9BW27 656 aa13.15□□□□□ -0.3
PRPF19-206ENST00000541371 THAP2Q9H0W7 228 aa13.15□□□□□ -0.3
PRPF19-206ENST00000541371 STARD5Q9NSY2 213 aa13.15□□□□□ -0.3
PRPF19-206ENST00000541371 HAUS2Q9NVX0 235 aa13.15□□□□□ -0.3
PRPF19-206ENST00000541371 SLC39A1Q9NY26 324 aa13.15□□□□□ -0.3
PRPF19-206ENST00000541371 TMEM63CQ9P1W3 806 aa13.15□□□□□ -0.3
PRPF19-206ENST00000541371 DNPEPQ9ULA0 475 aa13.15□□□□□ -0.3
PRPF19-206ENST00000541371 TTLL3Q9Y4R7 772 aa13.15□□□□□ -0.3
PRPF19-206ENST00000541371 CYSRT1A8MQ03 144 aa13.14□□□□□ -0.31
PRPF19-206ENST00000541371 MYO1FO00160 1098 aa13.14□□□□□ -0.31
PRPF19-206ENST00000541371 INPP4BO15327 924 aa13.14□□□□□ -0.31
PRPF19-206ENST00000541371 THRAP10827 490 aa13.14□□□□□ -0.31
PRPF19-206ENST00000541371 CA4P22748 312 aa13.14□□□□□ -0.31
PRPF19-206ENST00000541371 IL4RP24394 825 aa13.14□□□□□ -0.31
PRPF19-206ENST00000541371 GARSP41250 739 aaKnown RBP13.14□□□□□ -0.31
PRPF19-206ENST00000541371 CSRP3P50461 194 aa13.14□□□□□ -0.31
PRPF19-206ENST00000541371 NFKB2Q00653 900 aa13.14□□□□□ -0.31
PRPF19-206ENST00000541371 GALNT2Q10471 571 aa13.14□□□□□ -0.31
PRPF19-206ENST00000541371 NR1I3Q14994 352 aa13.14□□□□□ -0.31
PRPF19-206ENST00000541371 NFKBIBQ15653 356 aa13.14□□□□□ -0.31
PRPF19-206ENST00000541371 FIGNQ5HY92 759 aa13.14□□□□□ -0.31
PRPF19-206ENST00000541371 TIGD7Q6NT04 549 aaPredicted RBP13.14□□□□□ -0.31
PRPF19-206ENST00000541371 ATG14Q6ZNE5 492 aa13.14□□□□□ -0.31
PRPF19-206ENST00000541371 ZNF761Q86XN6 746 aaPredicted RBP13.14□□□□□ -0.31
PRPF19-206ENST00000541371 FAM129CQ86XR2 697 aa13.14□□□□□ -0.31
PRPF19-206ENST00000541371 NRSN1Q8IZ57 195 aa13.14□□□□□ -0.31
PRPF19-206ENST00000541371 OR10G6Q8NH81 332 aa13.14□□□□□ -0.31
PRPF19-206ENST00000541371 HTR3CQ8WXA8 447 aa13.14□□□□□ -0.31
PRPF19-206ENST00000541371 PMEPA1Q969W9 287 aa13.14□□□□□ -0.31
PRPF19-206ENST00000541371 AGAP2Q99490 1192 aa13.14□□□□□ -0.31
PRPF19-206ENST00000541371 RIOK2Q9BVS4 552 aaKnown RBP13.14□□□□□ -0.31
PRPF19-206ENST00000541371 DDA1Q9BW61 102 aa13.14□□□□□ -0.31
PRPF19-206ENST00000541371 ASPSCR1Q9BZE9 553 aa13.14□□□□□ -0.31
PRPF19-206ENST00000541371 TRIM4Q9C037 500 aa13.14□□□□□ -0.31
PRPF19-206ENST00000541371 RBM22Q9NW64 420 aaKnown RBP eCLIP13.14□□□□□ -0.31
PRPF19-206ENST00000541371 TMEM9Q9P0T7 183 aa13.14□□□□□ -0.31
PRPF19-206ENST00000541371 ZNHIT2Q9UHR6 403 aa13.14□□□□□ -0.31
PRPF19-206ENST00000541371 CHKBQ9Y259 395 aa13.14□□□□□ -0.31
PRPF19-206ENST00000541371 B3GALT1Q9Y5Z6 326 aa13.14□□□□□ -0.31
PRPF19-206ENST00000541371 KALRNO60229 2985 aa13.13□□□□□ -0.31
PRPF19-206ENST00000541371 EFCAB7A8K855 629 aa13.13□□□□□ -0.31
PRPF19-206ENST00000541371 B4E171 279 aa13.13□□□□□ -0.31
PRPF19-206ENST00000541371 MATN3O15232 486 aa13.13□□□□□ -0.31
PRPF19-206ENST00000541371 DUX1O43812 170 aa13.13□□□□□ -0.31
PRPF19-206ENST00000541371 MFSD11O43934 449 aa13.13□□□□□ -0.31
PRPF19-206ENST00000541371 PPFIA2O75334 1257 aa13.13□□□□□ -0.31
PRPF19-206ENST00000541371 CLDN7O95471 211 aa13.13□□□□□ -0.31
PRPF19-206ENST00000541371 CYP1A2P05177 515 aa13.13□□□□□ -0.31
PRPF19-206ENST00000541371 CD48P09326 243 aa13.13□□□□□ -0.31
PRPF19-206ENST00000541371 CSF2RBP32927 897 aa13.13□□□□□ -0.31
PRPF19-206ENST00000541371 UGT1A3P35503 534 aa13.13□□□□□ -0.31
PRPF19-206ENST00000541371 GJC1P36383 396 aa13.13□□□□□ -0.31
PRPF19-206ENST00000541371 TSPAN7P41732 249 aa13.13□□□□□ -0.31
PRPF19-206ENST00000541371 FASLGP48023 281 aa13.13□□□□□ -0.31
PRPF19-206ENST00000541371 STC1P52823 247 aa13.13□□□□□ -0.31
PRPF19-206ENST00000541371 DSC2Q02487 901 aa13.13□□□□□ -0.31
PRPF19-206ENST00000541371 IFI16Q16666 785 aaKnown RBP13.13□□□□□ -0.31
PRPF19-206ENST00000541371 SNAP47Q5SQN1 464 aa13.13□□□□□ -0.31
PRPF19-206ENST00000541371 DCAF12Q5T6F0 453 aa13.13□□□□□ -0.31
PRPF19-206ENST00000541371 HGSNATQ68CP4 663 aa13.13□□□□□ -0.31
PRPF19-206ENST00000541371 KCTD6Q8NC69 237 aa13.13□□□□□ -0.31
PRPF19-206ENST00000541371 SLC37A2Q8TED4 501 aa13.13□□□□□ -0.31
PRPF19-206ENST00000541371 MAML1Q92585 1016 aa13.13□□□□□ -0.31
PRPF19-206ENST00000541371 COX14Q96I36 57 aa13.13□□□□□ -0.31
PRPF19-206ENST00000541371 SLC12A9Q9BXP2 914 aa13.13□□□□□ -0.31
PRPF19-206ENST00000541371 TDRD1Q9BXT4 1180 aaKnown RBP13.13□□□□□ -0.31
PRPF19-206ENST00000541371 STN1Q9H668 368 aaKnown RBP13.13□□□□□ -0.31
PRPF19-206ENST00000541371 OCIAD1Q9NX40 245 aa13.13□□□□□ -0.31
PRPF19-206ENST00000541371 IL17BQ9UHF5 180 aa13.13□□□□□ -0.31
PRPF19-206ENST00000541371 AMACRQ9UHK6 382 aa13.13□□□□□ -0.31
PRPF19-206ENST00000541371 A8MU76 341 aa13.12□□□□□ -0.31
PRPF19-206ENST00000541371 MAP3K6O95382 1288 aa13.12□□□□□ -0.31
PRPF19-206ENST00000541371 ATP1A1P05023 1023 aaKnown RBP13.12□□□□□ -0.31
PRPF19-206ENST00000541371 SERPING1P05155 500 aa13.12□□□□□ -0.31
PRPF19-206ENST00000541371 CCNCP24863 283 aa13.12□□□□□ -0.31
PRPF19-206ENST00000541371 ARSDP51689 593 aa13.12□□□□□ -0.31
PRPF19-206ENST00000541371 RAB15P59190 212 aa13.12□□□□□ -0.31
PRPF19-206ENST00000541371 RPL26P61254 145 aaKnown RBP13.12□□□□□ -0.31
PRPF19-206ENST00000541371 HHEXQ03014 270 aa13.12□□□□□ -0.31
PRPF19-206ENST00000541371 DPYSL3Q14195 570 aa13.12□□□□□ -0.31
PRPF19-206ENST00000541371 CLCA4Q14CN2 919 aa13.12□□□□□ -0.31
PRPF19-206ENST00000541371 PAFAH1B3Q15102 231 aaKnown RBP13.12□□□□□ -0.31
PRPF19-206ENST00000541371 NCBP2-AS2Q69YL0 99 aa13.12□□□□□ -0.31
PRPF19-206ENST00000541371 ALG1LQ6GMV1 187 aa13.12□□□□□ -0.31
PRPF19-206ENST00000541371 BORAQ6PGQ7 559 aa13.12□□□□□ -0.31
PRPF19-206ENST00000541371 CHST15Q7LFX5 561 aaPredicted RBP13.12□□□□□ -0.31
PRPF19-206ENST00000541371 RAVER1Q8IY67 606 aaKnown RBP13.12□□□□□ -0.31
PRPF19-206ENST00000541371 CACNA2D3Q8IZS8 1091 aa13.12□□□□□ -0.31
PRPF19-206ENST00000541371 SFRP1Q8N474 314 aa13.12□□□□□ -0.31
PRPF19-206ENST00000541371 LPCAT1Q8NF37 534 aa13.12□□□□□ -0.31
PRPF19-206ENST00000541371 FAM71BQ8TC56 605 aa13.12□□□□□ -0.31
PRPF19-206ENST00000541371 SYN2Q92777 582 aaPredicted RBP13.12□□□□□ -0.31
PRPF19-206ENST00000541371 SH3KBP1Q96B97 665 aa13.12□□□□□ -0.31
PRPF19-206ENST00000541371 FUCA2Q9BTY2 467 aa13.12□□□□□ -0.31
PRPF19-206ENST00000541371 SLC25A18Q9H1K4 315 aa13.12□□□□□ -0.31
PRPF19-206ENST00000541371 PCDH9Q9HC56 1237 aa13.12□□□□□ -0.31
PRPF19-206ENST00000541371 GEMIN8Q9NWZ8 242 aaKnown RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms