RNA–Protein interactions for RNA: ENST00000540963.1

CHFR-218, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-218ENST00000540963 RAVER1Q8IY67 606 aaKnown RBP26.63■■□□□ 1.85
CHFR-218ENST00000540963 PGBD5Q8N414 524 aa26.63■■□□□ 1.85
CHFR-218ENST00000540963 AP2M1Q96CW1 435 aa26.63■■□□□ 1.85
CHFR-218ENST00000540963 PCMTD1Q96MG8 357 aaPredicted RBP26.63■■□□□ 1.85
CHFR-218ENST00000540963 PSMG3-AS1Q96PY0 264 aa26.63■■□□□ 1.85
CHFR-218ENST00000540963 ABCG8Q9H221 673 aa26.63■■□□□ 1.85
CHFR-218ENST00000540963 EPB41L1Q9H4G0 881 aa26.63■■□□□ 1.85
CHFR-218ENST00000540963 STK17BO94768 372 aa26.62■■□□□ 1.85
CHFR-218ENST00000540963 FERP16591 822 aa26.62■■□□□ 1.85
CHFR-218ENST00000540963 ZNF30P17039 623 aa26.62■■□□□ 1.85
CHFR-218ENST00000540963 OAS2P29728 719 aaKnown RBP26.62■■□□□ 1.85
CHFR-218ENST00000540963 MIPP30301 263 aa26.62■■□□□ 1.85
CHFR-218ENST00000540963 HHEXQ03014 270 aa26.62■■□□□ 1.85
CHFR-218ENST00000540963 TIPARPQ7Z3E1 657 aaKnown RBP26.62■■□□□ 1.85
CHFR-218ENST00000540963 TSPAN33Q86UF1 283 aa26.62■■□□□ 1.85
CHFR-218ENST00000540963 STARD8Q92502 1023 aa26.62■■□□□ 1.85
CHFR-218ENST00000540963 TMEM98Q9Y2Y6 226 aa26.62■■□□□ 1.85
CHFR-218ENST00000540963 KCTD3Q9Y597 815 aa26.62■■□□□ 1.85
CHFR-218ENST00000540963 TMEM191CA6NGB0 347 aa26.61■■□□□ 1.85
CHFR-218ENST00000540963 LGALS16A8MUM7 142 aa26.61■■□□□ 1.85
CHFR-218ENST00000540963 MAFKO60675 156 aa26.61■■□□□ 1.85
CHFR-218ENST00000540963 TCN2P20062 427 aa26.61■■□□□ 1.85
CHFR-218ENST00000540963 NOP2P46087 812 aaKnown RBP26.61■■□□□ 1.85
CHFR-218ENST00000540963 CD97P48960 835 aa26.61■■□□□ 1.85
CHFR-218ENST00000540963 KLRB1Q12918 225 aa26.61■■□□□ 1.85
CHFR-218ENST00000540963 KDELC2Q7Z4H8 507 aa26.61■■□□□ 1.85
CHFR-218ENST00000540963 TP53INP2Q8IXH6 220 aa26.61■■□□□ 1.85
CHFR-218ENST00000540963 ESX1Q8N693 406 aa26.61■■□□□ 1.85
CHFR-218ENST00000540963 EXD1Q8NHP7 514 aa26.61■■□□□ 1.85
CHFR-218ENST00000540963 NSMCE1Q8WV22 266 aa26.61■■□□□ 1.85
CHFR-218ENST00000540963 PIH1D2Q8WWB5 315 aa26.61■■□□□ 1.85
CHFR-218ENST00000540963 COX14Q96I36 57 aa26.61■■□□□ 1.85
CHFR-218ENST00000540963 ERGIC2Q96RQ1 377 aa26.61■■□□□ 1.85
CHFR-218ENST00000540963 VPS18Q9P253 973 aa26.61■■□□□ 1.85
CHFR-218ENST00000540963 TEX15Q9BXT5 2789 aa26.61■■□□□ 1.85
CHFR-218ENST00000540963 A8MU76 341 aa26.6■■□□□ 1.85
CHFR-218ENST00000540963 H3BRJ5 948 aa26.6■■□□□ 1.85
CHFR-218ENST00000540963 MAP3K6O95382 1288 aa26.6■■□□□ 1.85
CHFR-218ENST00000540963 DLGAP3O95886 979 aa26.6■■□□□ 1.85
CHFR-218ENST00000540963 SLC2A4P14672 509 aa26.6■■□□□ 1.85
CHFR-218ENST00000540963 STAT5AP42229 794 aa26.6■■□□□ 1.85
CHFR-218ENST00000540963 PPM1FP49593 454 aaPredicted RBP26.6■■□□□ 1.85
CHFR-218ENST00000540963 COPB1P53618 953 aaKnown RBP26.6■■□□□ 1.85
CHFR-218ENST00000540963 CDH6P55285 790 aa26.6■■□□□ 1.85
CHFR-218ENST00000540963 DEFB109BQ30KR1 87 aa26.6■■□□□ 1.85
CHFR-218ENST00000540963 ZNF761Q86XN6 746 aaPredicted RBP26.6■■□□□ 1.85
CHFR-218ENST00000540963 AVL9Q8NBF6 648 aa26.6■■□□□ 1.85
CHFR-218ENST00000540963 ANKRD20A12PQ8NF67 263 aa26.6■■□□□ 1.85
CHFR-218ENST00000540963 MIB2Q96AX9 1013 aa26.6■■□□□ 1.85
CHFR-218ENST00000540963 CTRCQ99895 268 aa26.6■■□□□ 1.85
CHFR-218ENST00000540963 SYT11Q9BT88 431 aa26.6■■□□□ 1.85
CHFR-218ENST00000540963 LDHAL6BQ9BYZ2 381 aaPredicted RBP26.6■■□□□ 1.85
CHFR-218ENST00000540963 FANCLQ9NW38 375 aa26.6■■□□□ 1.85
CHFR-218ENST00000540963 DNPEPQ9ULA0 475 aa26.6■■□□□ 1.85
CHFR-218ENST00000540963 PRR19A6NJB7 356 aa26.59■■□□□ 1.85
CHFR-218ENST00000540963 POLR1CO15160 346 aaPredicted RBP26.59■■□□□ 1.85
CHFR-218ENST00000540963 ANP32AP39687 249 aaKnown RBP26.59■■□□□ 1.85
CHFR-218ENST00000540963 DPYSL2Q16555 572 aa26.59■■□□□ 1.85
CHFR-218ENST00000540963 SNAP47Q5SQN1 464 aa26.59■■□□□ 1.85
CHFR-218ENST00000540963 MARC1Q5VT66 337 aa26.59■■□□□ 1.85
CHFR-218ENST00000540963 LRRC66Q68CR7 880 aa26.59■■□□□ 1.85
CHFR-218ENST00000540963 IYDQ6PHW0 289 aa26.59■■□□□ 1.85
CHFR-218ENST00000540963 TMCO3Q6UWJ1 677 aa26.59■■□□□ 1.85
CHFR-218ENST00000540963 ATCAYQ86WG3 371 aa26.59■■□□□ 1.85
CHFR-218ENST00000540963 UNC5BQ8IZJ1 945 aa26.59■■□□□ 1.85
CHFR-218ENST00000540963 NCSTNQ92542 709 aa26.59■■□□□ 1.85
CHFR-218ENST00000540963 HERPUD2Q9BSE4 406 aa26.59■■□□□ 1.85
CHFR-218ENST00000540963 TAS2R14Q9NYV8 317 aa26.59■■□□□ 1.85
CHFR-218ENST00000540963 LIMA1Q9UHB6 759 aaKnown RBP26.59■■□□□ 1.85
CHFR-218ENST00000540963 USP9XQ93008 2570 aaPredicted RBP26.58■■□□□ 1.85
CHFR-218ENST00000540963 FZD6O60353 706 aa26.58■■□□□ 1.85
CHFR-218ENST00000540963 LRCH4O75427 683 aa26.58■■□□□ 1.85
CHFR-218ENST00000540963 ANKRD34CP0C6C1 535 aa26.58■■□□□ 1.85
CHFR-218ENST00000540963 TNFAIP3P21580 790 aa26.58■■□□□ 1.85
CHFR-218ENST00000540963 ARL4AP40617 200 aa26.58■■□□□ 1.85
CHFR-218ENST00000540963 MMP13P45452 471 aa26.58■■□□□ 1.85
CHFR-218ENST00000540963 PTSQ03393 145 aa26.58■■□□□ 1.85
CHFR-218ENST00000540963 SLC9B2Q86UD5 537 aa26.58■■□□□ 1.85
CHFR-218ENST00000540963 SCAMP4Q969E2 229 aa26.58■■□□□ 1.85
CHFR-218ENST00000540963 HSD3B7Q9H2F3 369 aa26.58■■□□□ 1.85
CHFR-218ENST00000540963 RMI1Q9H9A7 625 aa26.58■■□□□ 1.85
CHFR-218ENST00000540963 CD84Q9UIB8 345 aa26.58■■□□□ 1.85
CHFR-218ENST00000540963 PCDHB3Q9Y5E6 796 aa26.58■■□□□ 1.85
CHFR-218ENST00000540963 TRBV23OR9-2A0A075B6M9 112 aa26.57■■□□□ 1.84
CHFR-218ENST00000540963 LRRC10BA6NIK2 292 aa26.57■■□□□ 1.84
CHFR-218ENST00000540963 EML2O95834 649 aa26.57■■□□□ 1.84
CHFR-218ENST00000540963 PCK1P35558 622 aa26.57■■□□□ 1.84
CHFR-218ENST00000540963 MAXP61244 160 aa26.57■■□□□ 1.84
CHFR-218ENST00000540963 UBXN1Q04323 297 aa26.57■■□□□ 1.84
CHFR-218ENST00000540963 RFLNAQ6ZTI6 216 aa26.57■■□□□ 1.84
CHFR-218ENST00000540963 MARK2Q7KZI7 788 aaKnown RBP26.57■■□□□ 1.84
CHFR-218ENST00000540963 IRF2BP2Q7Z5L9 587 aa26.57■■□□□ 1.84
CHFR-218ENST00000540963 TRIM74Q86UV6 250 aa26.57■■□□□ 1.84
CHFR-218ENST00000540963 LRRC49Q8IUZ0 686 aa26.57■■□□□ 1.84
CHFR-218ENST00000540963 ATPAF2Q8N5M1 289 aa26.57■■□□□ 1.84
CHFR-218ENST00000540963 APMAPQ9HDC9 416 aa26.57■■□□□ 1.84
CHFR-218ENST00000540963 MYO6Q9UM54 1294 aa26.57■■□□□ 1.84
CHFR-218ENST00000540963 PLAAQ9Y263 795 aa26.57■■□□□ 1.84
CHFR-218ENST00000540963 KCNMB2Q9Y691 235 aa26.57■■□□□ 1.84
CHFR-218ENST00000540963 KIR2DS5A0A0G2JLQ3 304 aa26.56■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms