RNA–Protein interactions for RNA: ENST00000540756.5

TTC3-225, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2 BASIC

Gene TTC3, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-225ENST00000540756 ACSS2Q9NR19 701 aa24.44■■□□□ 1.5
TTC3-225ENST00000540756 SLC30A1Q9Y6M5 507 aa24.44■■□□□ 1.5
TTC3-225ENST00000540756 BIRC5O15392 142 aa24.43■■□□□ 1.5
TTC3-225ENST00000540756 KLHL2O95198 593 aa24.43■■□□□ 1.5
TTC3-225ENST00000540756 CCDC166P0CW27 439 aa24.43■■□□□ 1.5
TTC3-225ENST00000540756 CPA3P15088 417 aa24.43■■□□□ 1.5
TTC3-225ENST00000540756 IL12RB1P42701 662 aa24.43■■□□□ 1.5
TTC3-225ENST00000540756 EIF4HQ15056 248 aaKnown RBP24.43■■□□□ 1.5
TTC3-225ENST00000540756 ITPRIPL2Q3MIP1 535 aa24.43■■□□□ 1.5
TTC3-225ENST00000540756 SETMARQ53H47 684 aaPredicted RBP24.43■■□□□ 1.5
TTC3-225ENST00000540756 ZNF805Q5CZA5 627 aa24.43■■□□□ 1.5
TTC3-225ENST00000540756 ATG14Q6ZNE5 492 aa24.43■■□□□ 1.5
TTC3-225ENST00000540756 SCYL1Q96KG9 808 aa24.43■■□□□ 1.5
TTC3-225ENST00000540756 TSSK1BQ9BXA7 367 aa24.43■■□□□ 1.5
TTC3-225ENST00000540756 ASB8Q9H765 288 aa24.43■■□□□ 1.5
TTC3-225ENST00000540756 COLQQ9Y215 455 aaPredicted RBP24.43■■□□□ 1.5
TTC3-225ENST00000540756 FAM50BQ9Y247 325 aa24.43■■□□□ 1.5
TTC3-225ENST00000540756 C16orf96A6NNT2 1141 aa24.42■■□□□ 1.5
TTC3-225ENST00000540756 PALM2-AKAP2B1ALY0 433 aaPredicted RBP24.42■■□□□ 1.5
TTC3-225ENST00000540756 CTSL3PQ5NE16 218 aa24.42■■□□□ 1.5
TTC3-225ENST00000540756 EGFLAMQ63HQ2 1017 aa24.42■■□□□ 1.5
TTC3-225ENST00000540756 LRRC8EQ6NSJ5 796 aa24.42■■□□□ 1.5
TTC3-225ENST00000540756 SERPINA13PQ6UXR4 307 aa24.42■■□□□ 1.5
TTC3-225ENST00000540756 TTC7BQ86TV6 843 aa24.42■■□□□ 1.5
TTC3-225ENST00000540756 CACNA2D3Q8IZS8 1091 aa24.42■■□□□ 1.5
TTC3-225ENST00000540756 TCF12Q99081 682 aa24.42■■□□□ 1.5
TTC3-225ENST00000540756 BOCQ9BWV1 1114 aa24.42■■□□□ 1.5
TTC3-225ENST00000540756 CACNA2D2Q9NY47 1150 aa24.42■■□□□ 1.5
TTC3-225ENST00000540756 CAMSAP3Q9P1Y5 1249 aaPredicted RBP24.42■■□□□ 1.5
TTC3-225ENST00000540756 CD84Q9UIB8 345 aa24.42■■□□□ 1.5
TTC3-225ENST00000540756 A0A087X1B8 175 aa24.42■■□□□ 1.5
TTC3-225ENST00000540756 GLYATL1P3A0A0U1RQE8 302 aa24.42■■□□□ 1.5
TTC3-225ENST00000540756 PLK4O00444 970 aa24.42■■□□□ 1.5
TTC3-225ENST00000540756 SOX1O00570 391 aaPredicted RBP24.42■■□□□ 1.5
TTC3-225ENST00000540756 TTPAP49638 278 aa24.42■■□□□ 1.5
TTC3-225ENST00000540756 POLR2LP62875 67 aaKnown RBP24.42■■□□□ 1.5
TTC3-225ENST00000540756 NFATC2Q13469 925 aa24.42■■□□□ 1.5
TTC3-225ENST00000540756 HTR4Q13639 388 aa24.42■■□□□ 1.5
TTC3-225ENST00000540756 AAK1Q2M2I8 961 aa24.42■■□□□ 1.5
TTC3-225ENST00000540756 SPATA21Q7Z572 469 aa24.42■■□□□ 1.5
TTC3-225ENST00000540756 TBC1D1Q86TI0 1168 aaPredicted RBP24.42■■□□□ 1.5
TTC3-225ENST00000540756 SUSD6Q92537 303 aa24.42■■□□□ 1.5
TTC3-225ENST00000540756 PBXIP1Q96AQ6 731 aa24.42■■□□□ 1.5
TTC3-225ENST00000540756 UBXN10Q96LJ8 280 aa24.42■■□□□ 1.5
TTC3-225ENST00000540756 ABCG8Q9H221 673 aa24.42■■□□□ 1.5
TTC3-225ENST00000540756 XPR1Q9UBH6 696 aa24.42■■□□□ 1.5
TTC3-225ENST00000540756 KPNA3O00505 521 aaPredicted RBP24.41■■□□□ 1.5
TTC3-225ENST00000540756 COL6A2P12110 1019 aa24.41■■□□□ 1.5
TTC3-225ENST00000540756 DBN1Q16643 649 aa24.41■■□□□ 1.5
TTC3-225ENST00000540756 PARS2Q7L3T8 475 aaKnown RBP24.41■■□□□ 1.5
TTC3-225ENST00000540756 SERPINA9Q86WD7 417 aa24.41■■□□□ 1.5
TTC3-225ENST00000540756 TSPAN17Q96FV3 270 aa24.41■■□□□ 1.5
TTC3-225ENST00000540756 SLC30A3Q99726 388 aa24.41■■□□□ 1.5
TTC3-225ENST00000540756 EPS15L1Q9UBC2 864 aa24.41■■□□□ 1.5
TTC3-225ENST00000540756 ITM2BQ9Y287 266 aa24.41■■□□□ 1.5
TTC3-225ENST00000540756 TSPAN11A1L157 253 aa24.4■■□□□ 1.5
TTC3-225ENST00000540756 IQCF5A8MTL0 148 aa24.4■■□□□ 1.5
TTC3-225ENST00000540756 UPK3BL1B0FP48 263 aa24.4■■□□□ 1.5
TTC3-225ENST00000540756 TARM1B6A8C7 271 aa24.4■■□□□ 1.5
TTC3-225ENST00000540756 UPK3BL2E5RIL1 263 aa24.4■■□□□ 1.5
TTC3-225ENST00000540756 KLF11O14901 512 aa24.4■■□□□ 1.5
TTC3-225ENST00000540756 ITM2AO43736 263 aa24.4■■□□□ 1.5
TTC3-225ENST00000540756 NIPSNAP2O75323 286 aa24.4■■□□□ 1.5
TTC3-225ENST00000540756 ARRB2P32121 409 aa24.4■■□□□ 1.5
TTC3-225ENST00000540756 SPAM1P38567 509 aa24.4■■□□□ 1.5
TTC3-225ENST00000540756 ITGA9Q13797 1035 aa24.4■■□□□ 1.5
TTC3-225ENST00000540756 CCDC197Q8NCU1 140 aa24.4■■□□□ 1.5
TTC3-225ENST00000540756 SGF29Q96ES7 293 aa24.4■■□□□ 1.5
TTC3-225ENST00000540756 FAM129BQ96TA1 746 aa24.4■■□□□ 1.5
TTC3-225ENST00000540756 STARD13Q9Y3M8 1113 aa24.4■■□□□ 1.5
TTC3-225ENST00000540756 PLXNB3Q9ULL4 1909 aa24.4■■□□□ 1.5
TTC3-225ENST00000540756 EDDM13A0A1B0GTR0 161 aa24.4■■□□□ 1.5
TTC3-225ENST00000540756 GRXCR2A6NFK2 248 aa24.4■■□□□ 1.5
TTC3-225ENST00000540756 EBAG9O00559 213 aa24.4■■□□□ 1.5
TTC3-225ENST00000540756 LYPLA1O75608 230 aaPredicted RBP24.4■■□□□ 1.5
TTC3-225ENST00000540756 WASP42768 502 aa24.4■■□□□ 1.5
TTC3-225ENST00000540756 HNRNPH2P55795 449 aaKnown RBP24.4■■□□□ 1.5
TTC3-225ENST00000540756 NAPRTQ6XQN6 538 aa24.4■■□□□ 1.5
TTC3-225ENST00000540756 HSD11B1LQ7Z5J1 315 aa24.4■■□□□ 1.5
TTC3-225ENST00000540756 SNX20Q7Z614 316 aa24.4■■□□□ 1.5
TTC3-225ENST00000540756 TSNARE1Q96NA8 513 aa24.4■■□□□ 1.5
TTC3-225ENST00000540756 OSBPL1AQ9BXW6 950 aa24.4■■□□□ 1.5
TTC3-225ENST00000540756 CD207Q9UJ71 328 aa24.4■■□□□ 1.5
TTC3-225ENST00000540756 RHOBTB1O94844 696 aa24.39■■□□□ 1.5
TTC3-225ENST00000540756 POU3F3P20264 500 aaPredicted RBP24.39■■□□□ 1.5
TTC3-225ENST00000540756 GALK1P51570 392 aa24.39■■□□□ 1.5
TTC3-225ENST00000540756 CBARPQ8N350 705 aaPredicted RBP24.39■■□□□ 1.5
TTC3-225ENST00000540756 EZH1Q92800 747 aaPredicted RBP24.39■■□□□ 1.5
TTC3-225ENST00000540756 NPHS2Q9NP85 383 aa24.39■■□□□ 1.5
TTC3-225ENST00000540756 THAP10Q9P2Z0 257 aaPredicted RBP24.39■■□□□ 1.5
TTC3-225ENST00000540756 PPM1HQ9ULR3 514 aa24.39■■□□□ 1.5
TTC3-225ENST00000540756 CORO1CQ9ULV4 474 aaPredicted RBP24.39■■□□□ 1.5
TTC3-225ENST00000540756 PIKFYVEQ9Y2I7 2098 aa24.39■■□□□ 1.49
TTC3-225ENST00000540756 A0A1W2PQ67 120 aa24.39■■□□□ 1.49
TTC3-225ENST00000540756 ANHXE9PGG2 379 aa24.39■■□□□ 1.49
TTC3-225ENST00000540756 LTA4HP09960 611 aaKnown RBP24.39■■□□□ 1.49
TTC3-225ENST00000540756 GRIA2P42262 883 aa24.39■■□□□ 1.49
TTC3-225ENST00000540756 SPINT3P49223 89 aa24.39■■□□□ 1.49
TTC3-225ENST00000540756 SUOXP51687 545 aa24.39■■□□□ 1.49
TTC3-225ENST00000540756 TXNDC11Q6PKC3 985 aa24.39■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms