RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 KCNC1P48547 511 aa22.34■■□□□ 1.17
HOMER3-204ENST00000539827 RCN2Q14257 317 aa22.34■■□□□ 1.17
HOMER3-204ENST00000539827 LRRC73Q5JTD7 316 aa22.34■■□□□ 1.17
HOMER3-204ENST00000539827 AARS2Q5JTZ9 985 aaKnown RBP22.34■■□□□ 1.17
HOMER3-204ENST00000539827 PAQR3Q6TCH7 311 aa22.34■■□□□ 1.17
HOMER3-204ENST00000539827 ISCA2Q86U28 154 aa22.34■■□□□ 1.17
HOMER3-204ENST00000539827 SMARCD2Q92925 531 aa22.34■■□□□ 1.17
HOMER3-204ENST00000539827 PTERQ96BW5 349 aa22.34■■□□□ 1.17
HOMER3-204ENST00000539827 KLHL32Q96NJ5 620 aa22.34■■□□□ 1.17
HOMER3-204ENST00000539827 GPR21Q99679 349 aa22.34■■□□□ 1.17
HOMER3-204ENST00000539827 SHCBP1LQ9BZQ2 653 aa22.34■■□□□ 1.17
HOMER3-204ENST00000539827 EBF3Q9H4W6 596 aa22.34■■□□□ 1.17
HOMER3-204ENST00000539827 TAS2R13Q9NYV9 303 aa22.34■■□□□ 1.17
HOMER3-204ENST00000539827 VPS9D1Q9Y2B5 631 aa22.34■■□□□ 1.17
HOMER3-204ENST00000539827 CCDC85CA6NKD9 419 aa22.34■■□□□ 1.17
HOMER3-204ENST00000539827 GOLGA8CPA6NN73 597 aa22.34■■□□□ 1.17
HOMER3-204ENST00000539827 GAPDHSO14556 408 aaPredicted RBP22.34■■□□□ 1.17
HOMER3-204ENST00000539827 NIPSNAP2O75323 286 aa22.34■■□□□ 1.17
HOMER3-204ENST00000539827 PAPLNO95428 1278 aa22.34■■□□□ 1.17
HOMER3-204ENST00000539827 CBX6O95503 412 aa22.34■■□□□ 1.17
HOMER3-204ENST00000539827 ADH1CP00326 375 aa22.34■■□□□ 1.17
HOMER3-204ENST00000539827 ZNF37AP17032 561 aaPredicted RBP22.34■■□□□ 1.17
HOMER3-204ENST00000539827 BPIP17213 487 aa22.34■■□□□ 1.17
HOMER3-204ENST00000539827 RECQLP46063 649 aaPredicted RBP22.34■■□□□ 1.17
HOMER3-204ENST00000539827 ARL13AQ5H913 290 aaPredicted RBP22.34■■□□□ 1.17
HOMER3-204ENST00000539827 CDH19Q9H159 772 aa22.34■■□□□ 1.17
HOMER3-204ENST00000539827 SLC28A3Q9HAS3 691 aa22.34■■□□□ 1.17
HOMER3-204ENST00000539827 HAO1Q9UJM8 370 aa22.34■■□□□ 1.17
HOMER3-204ENST00000539827 A8MT66 165 aa22.33■■□□□ 1.17
HOMER3-204ENST00000539827 HEPACAM2A8MVW5 462 aa22.33■■□□□ 1.17
HOMER3-204ENST00000539827 LINC01565O15544 149 aa22.33■■□□□ 1.17
HOMER3-204ENST00000539827 PRAMEF1O95521 474 aa22.33■■□□□ 1.17
HOMER3-204ENST00000539827 T-ENOLP0DO92 83 aa22.33■■□□□ 1.17
HOMER3-204ENST00000539827 ASPHQ12797 758 aa22.33■■□□□ 1.17
HOMER3-204ENST00000539827 GDPD4Q6W3E5 623 aa22.33■■□□□ 1.17
HOMER3-204ENST00000539827 LSMEM2Q8N112 164 aa22.33■■□□□ 1.17
HOMER3-204ENST00000539827 FRS2Q8WU20 508 aa22.33■■□□□ 1.17
HOMER3-204ENST00000539827 SCRN2Q96FV2 425 aa22.33■■□□□ 1.17
HOMER3-204ENST00000539827 ZNF641Q96N77 438 aaPredicted RBP22.33■■□□□ 1.17
HOMER3-204ENST00000539827 SLC30A3Q99726 388 aa22.33■■□□□ 1.17
HOMER3-204ENST00000539827 NMUR2Q9GZQ4 415 aa22.33■■□□□ 1.17
HOMER3-204ENST00000539827 ASB8Q9H765 288 aa22.33■■□□□ 1.17
HOMER3-204ENST00000539827 TXLNGQ9NUQ3 528 aa22.33■■□□□ 1.17
HOMER3-204ENST00000539827 DZANK1Q9NVP4 752 aa22.33■■□□□ 1.17
HOMER3-204ENST00000539827 ZNF195O14628 629 aa22.32■■□□□ 1.16
HOMER3-204ENST00000539827 HOXC11O43248 304 aaPredicted RBP22.32■■□□□ 1.16
HOMER3-204ENST00000539827 UNC5CO95185 931 aa22.32■■□□□ 1.16
HOMER3-204ENST00000539827 SLC6A11P48066 632 aa22.32■■□□□ 1.16
HOMER3-204ENST00000539827 RAB30Q15771 203 aa22.32■■□□□ 1.16
HOMER3-204ENST00000539827 CTC1Q2NKJ3 1217 aa22.32■■□□□ 1.16
HOMER3-204ENST00000539827 VWA5B1Q5TIE3 1220 aa22.32■■□□□ 1.16
HOMER3-204ENST00000539827 TRIM67Q6ZTA4 783 aa22.32■■□□□ 1.16
HOMER3-204ENST00000539827 TPRG1Q6ZUI0 275 aa22.32■■□□□ 1.16
HOMER3-204ENST00000539827 EXT2Q93063 718 aa22.32■■□□□ 1.16
HOMER3-204ENST00000539827 TBRG4Q969Z0 631 aaKnown RBP eCLIP22.32■■□□□ 1.16
HOMER3-204ENST00000539827 CCDC97Q96F63 343 aaPredicted RBP22.32■■□□□ 1.16
HOMER3-204ENST00000539827 SIKE1Q9BRV8 207 aa22.32■■□□□ 1.16
HOMER3-204ENST00000539827 ILKAPQ9H0C8 392 aaPredicted RBP22.32■■□□□ 1.16
HOMER3-204ENST00000539827 IL26Q9NPH9 171 aa22.32■■□□□ 1.16
HOMER3-204ENST00000539827 SCN8AQ9UQD0 1980 aa22.32■■□□□ 1.16
HOMER3-204ENST00000539827 H3BMM5 538 aa22.32■■□□□ 1.16
HOMER3-204ENST00000539827 TULP3O75386 442 aa22.32■■□□□ 1.16
HOMER3-204ENST00000539827 UGT1A6P19224 532 aa22.32■■□□□ 1.16
HOMER3-204ENST00000539827 UGT1A1P22309 533 aa22.32■■□□□ 1.16
HOMER3-204ENST00000539827 UGT1A4P22310 534 aa22.32■■□□□ 1.16
HOMER3-204ENST00000539827 UGT1A3P35503 534 aa22.32■■□□□ 1.16
HOMER3-204ENST00000539827 UGT1A5P35504 534 aa22.32■■□□□ 1.16
HOMER3-204ENST00000539827 NNMTP40261 264 aa22.32■■□□□ 1.16
HOMER3-204ENST00000539827 PTGER3P43115 390 aa22.32■■□□□ 1.16
HOMER3-204ENST00000539827 IDH3AP50213 366 aa22.32■■□□□ 1.16
HOMER3-204ENST00000539827 DNAJB13P59910 316 aa22.32■■□□□ 1.16
HOMER3-204ENST00000539827 CHRNA6Q15825 494 aa22.32■■□□□ 1.16
HOMER3-204ENST00000539827 LRRC66Q68CR7 880 aa22.32■■□□□ 1.16
HOMER3-204ENST00000539827 USP45Q70EL2 814 aa22.32■■□□□ 1.16
HOMER3-204ENST00000539827 SERPINA9Q86WD7 417 aa22.32■■□□□ 1.16
HOMER3-204ENST00000539827 KIF2BQ8N4N8 673 aa22.32■■□□□ 1.16
HOMER3-204ENST00000539827 ZNF366Q8N895 744 aa22.32■■□□□ 1.16
HOMER3-204ENST00000539827 SIDT2Q8NBJ9 832 aaKnown RBP22.32■■□□□ 1.16
HOMER3-204ENST00000539827 PHF21BQ96EK2 531 aa22.32■■□□□ 1.16
HOMER3-204ENST00000539827 LYSMD1Q96S90 227 aa22.32■■□□□ 1.16
HOMER3-204ENST00000539827 HEPHQ9BQS7 1158 aa22.32■■□□□ 1.16
HOMER3-204ENST00000539827 BRD9Q9H8M2 597 aa22.32■■□□□ 1.16
HOMER3-204ENST00000539827 SYTL2Q9HCH5 934 aa22.32■■□□□ 1.16
HOMER3-204ENST00000539827 ARL8BQ9NVJ2 186 aa22.32■■□□□ 1.16
HOMER3-204ENST00000539827 ARMCX1Q9P291 453 aa22.32■■□□□ 1.16
HOMER3-204ENST00000539827 PPIL1Q9Y3C6 166 aa22.32■■□□□ 1.16
HOMER3-204ENST00000539827 RAP2CQ9Y3L5 183 aa22.32■■□□□ 1.16
HOMER3-204ENST00000539827 WASH3PC4AMC7 463 aa22.31■■□□□ 1.16
HOMER3-204ENST00000539827 VPS26AO75436 327 aa22.31■■□□□ 1.16
HOMER3-204ENST00000539827 MESP2Q0VG99 397 aa22.31■■□□□ 1.16
HOMER3-204ENST00000539827 OR4D1Q15615 310 aa22.31■■□□□ 1.16
HOMER3-204ENST00000539827 GPR149Q86SP6 731 aa22.31■■□□□ 1.16
HOMER3-204ENST00000539827 NAT14Q8WUY8 206 aa22.31■■□□□ 1.16
HOMER3-204ENST00000539827 KLHL29Q96CT2 875 aa22.31■■□□□ 1.16
HOMER3-204ENST00000539827 TMEM237Q96Q45 408 aa22.31■■□□□ 1.16
HOMER3-204ENST00000539827 CDCA3Q99618 268 aaPredicted RBP22.31■■□□□ 1.16
HOMER3-204ENST00000539827 DNAJC28Q9NX36 388 aa22.31■■□□□ 1.16
HOMER3-204ENST00000539827 NCKIPSDQ9NZQ3 722 aa22.31■■□□□ 1.16
HOMER3-204ENST00000539827 GLYATL1P3A0A0U1RQE8 302 aa22.3■■□□□ 1.16
HOMER3-204ENST00000539827 OTOL1A6NHN0 477 aaPredicted RBP22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms