RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 AGGF1Q8N302 714 aaeCLIP15.36■□□□□ 0.05
DDB1-216ENST00000539739 FBXO36Q8NEA4 188 aa15.36■□□□□ 0.05
DDB1-216ENST00000539739 SCAMP4Q969E2 229 aa15.36■□□□□ 0.05
DDB1-216ENST00000539739 ZNF669Q96BR6 464 aaPredicted RBP15.36■□□□□ 0.05
DDB1-216ENST00000539739 CENPTQ96BT3 561 aa15.36■□□□□ 0.05
DDB1-216ENST00000539739 MFSD3Q96ES6 412 aa15.36■□□□□ 0.05
DDB1-216ENST00000539739 CDKN2AIPNLQ96HQ2 116 aa15.36■□□□□ 0.05
DDB1-216ENST00000539739 SERAC1Q96JX3 654 aa15.36■□□□□ 0.05
DDB1-216ENST00000539739 ZNF778Q96MU6 729 aa15.36■□□□□ 0.05
DDB1-216ENST00000539739 SPATA16Q9BXB7 569 aa15.36■□□□□ 0.05
DDB1-216ENST00000539739 SLC2A6Q9UGQ3 507 aa15.36■□□□□ 0.05
DDB1-216ENST00000539739 FKBPLQ9UIM3 349 aa15.36■□□□□ 0.05
DDB1-216ENST00000539739 GLYATL1P3A0A0U1RQE8 302 aa15.35■□□□□ 0.05
DDB1-216ENST00000539739 H0YHG0 523 aa15.35■□□□□ 0.05
DDB1-216ENST00000539739 H7C0S8 307 aa15.35■□□□□ 0.05
DDB1-216ENST00000539739 FPGTO14772 594 aa15.35■□□□□ 0.05
DDB1-216ENST00000539739 PSMA3P25788 255 aa15.35■□□□□ 0.05
DDB1-216ENST00000539739 MAGEA4P43358 317 aa15.35■□□□□ 0.05
DDB1-216ENST00000539739 GPR1P46091 355 aa15.35■□□□□ 0.05
DDB1-216ENST00000539739 ITGA9Q13797 1035 aa15.35■□□□□ 0.05
DDB1-216ENST00000539739 STAT4Q14765 748 aa15.35■□□□□ 0.05
DDB1-216ENST00000539739 SLMAPQ14BN4 828 aa15.35■□□□□ 0.05
DDB1-216ENST00000539739 WSCD2Q2TBF2 565 aa15.35■□□□□ 0.05
DDB1-216ENST00000539739 HENMT1Q5T8I9 393 aaKnown RBP15.35■□□□□ 0.05
DDB1-216ENST00000539739 RAET1GQ6H3X3 334 aa15.35■□□□□ 0.05
DDB1-216ENST00000539739 CES3Q6UWW8 571 aa15.35■□□□□ 0.05
DDB1-216ENST00000539739 FAM151BQ6UXP7 276 aa15.35■□□□□ 0.05
DDB1-216ENST00000539739 CCNI2Q6ZMN8 369 aaPredicted RBP15.35■□□□□ 0.05
DDB1-216ENST00000539739 ARMCX6Q7L4S7 300 aa15.35■□□□□ 0.05
DDB1-216ENST00000539739 PALM2Q8IXS6 379 aa15.35■□□□□ 0.05
DDB1-216ENST00000539739 TP53I13Q8NBR0 393 aaPredicted RBP15.35■□□□□ 0.05
DDB1-216ENST00000539739 OR13J1Q8NGT2 312 aa15.35■□□□□ 0.05
DDB1-216ENST00000539739 OR6P1Q8NGX9 317 aa15.35■□□□□ 0.05
DDB1-216ENST00000539739 DTX3LQ8TDB6 740 aa15.35■□□□□ 0.05
DDB1-216ENST00000539739 HDAC10Q969S8 669 aa15.35■□□□□ 0.05
DDB1-216ENST00000539739 TBATAQ96M53 351 aa15.35■□□□□ 0.05
DDB1-216ENST00000539739 ZSCAN5AQ9BUG6 496 aa15.35■□□□□ 0.05
DDB1-216ENST00000539739 RIOK2Q9BVS4 552 aaKnown RBP15.35■□□□□ 0.05
DDB1-216ENST00000539739 KCNH6Q9H252 994 aa15.35■□□□□ 0.05
DDB1-216ENST00000539739 FZD3Q9NPG1 666 aa15.35■□□□□ 0.05
DDB1-216ENST00000539739 IL26Q9NPH9 171 aa15.35■□□□□ 0.05
DDB1-216ENST00000539739 TREX1Q9NSU2 369 aa15.35■□□□□ 0.05
DDB1-216ENST00000539739 EIF2B4Q9UI10 523 aaKnown RBP15.35■□□□□ 0.05
DDB1-216ENST00000539739 HS3ST3A1Q9Y663 406 aa15.35■□□□□ 0.05
DDB1-216ENST00000539739 SLC30A1Q9Y6M5 507 aa15.35■□□□□ 0.05
DDB1-216ENST00000539739 PCCBP05166 539 aa15.35■□□□□ 0.05
DDB1-216ENST00000539739 TSHRP16473 764 aa15.35■□□□□ 0.05
DDB1-216ENST00000539739 PTGER3P43115 390 aa15.35■□□□□ 0.05
DDB1-216ENST00000539739 VSNL1P62760 191 aa15.35■□□□□ 0.05
DDB1-216ENST00000539739 ACVR1Q04771 509 aa15.35■□□□□ 0.05
DDB1-216ENST00000539739 FASTKD3Q14CZ7 662 aaKnown RBP15.35■□□□□ 0.05
DDB1-216ENST00000539739 IRF4Q15306 451 aa15.35■□□□□ 0.05
DDB1-216ENST00000539739 SPANXN3Q5MJ09 141 aa15.35■□□□□ 0.05
DDB1-216ENST00000539739 PDPK2PQ6A1A2 396 aa15.35■□□□□ 0.05
DDB1-216ENST00000539739 KIAA0930Q6ICG6 404 aaPredicted RBP15.35■□□□□ 0.05
DDB1-216ENST00000539739 PNCKQ6P2M8 343 aa15.35■□□□□ 0.05
DDB1-216ENST00000539739 IGDCC3Q8IVU1 814 aa15.35■□□□□ 0.05
DDB1-216ENST00000539739 TRAM1L1Q8N609 369 aa15.35■□□□□ 0.05
DDB1-216ENST00000539739 FAM174AQ8TBP5 190 aa15.35■□□□□ 0.05
DDB1-216ENST00000539739 DNASE2BQ8WZ79 361 aa15.35■□□□□ 0.05
DDB1-216ENST00000539739 CFAP36Q96G28 342 aa15.35■□□□□ 0.05
DDB1-216ENST00000539739 KLF6Q99612 283 aaPredicted RBP15.35■□□□□ 0.05
DDB1-216ENST00000539739 MYOCQ99972 504 aa15.35■□□□□ 0.05
DDB1-216ENST00000539739 PARD6BQ9BYG5 372 aa15.35■□□□□ 0.05
DDB1-216ENST00000539739 MIR1-1HGQ9H1L0 117 aa15.35■□□□□ 0.05
DDB1-216ENST00000539739 EBF2Q9HAK2 575 aa15.35■□□□□ 0.05
DDB1-216ENST00000539739 RAB23Q9ULC3 237 aa15.35■□□□□ 0.05
DDB1-216ENST00000539739 CCL22O00626 93 aa15.34■□□□□ 0.05
DDB1-216ENST00000539739 RAD51BO15315 384 aa15.34■□□□□ 0.05
DDB1-216ENST00000539739 SRP72O76094 671 aaKnown RBP15.34■□□□□ 0.05
DDB1-216ENST00000539739 PRAMEF1O95521 474 aa15.34■□□□□ 0.05
DDB1-216ENST00000539739 ITGALP20701 1170 aa15.34■□□□□ 0.05
DDB1-216ENST00000539739 MAOBP27338 520 aa15.34■□□□□ 0.05
DDB1-216ENST00000539739 MC4RP32245 332 aa15.34■□□□□ 0.05
DDB1-216ENST00000539739 DPP6P42658 865 aa15.34■□□□□ 0.05
DDB1-216ENST00000539739 ARSDP51689 593 aa15.34■□□□□ 0.05
DDB1-216ENST00000539739 CORO7P57737 925 aa15.34■□□□□ 0.05
DDB1-216ENST00000539739 CRYMQ14894 314 aa15.34■□□□□ 0.05
DDB1-216ENST00000539739 AFTPHQ6ULP2 937 aa15.34■□□□□ 0.05
DDB1-216ENST00000539739 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.34■□□□□ 0.05
DDB1-216ENST00000539739 PRSS33Q8NF86 280 aa15.34■□□□□ 0.05
DDB1-216ENST00000539739 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.34■□□□□ 0.057e-10■■■■■ 41.2
DDB1-216ENST00000539739 SUDS3Q9H7L9 328 aaPredicted RBP15.34■□□□□ 0.05
DDB1-216ENST00000539739 MBNL1Q9NR56 388 aaKnown RBP15.34■□□□□ 0.05
DDB1-216ENST00000539739 AASDHPPTQ9NRN7 309 aa15.34■□□□□ 0.05
DDB1-216ENST00000539739 FAM169AQ9Y6X4 670 aa15.34■□□□□ 0.05
DDB1-216ENST00000539739 R4GN57 208 aa15.34■□□□□ 0.05
DDB1-216ENST00000539739 GON4LQ3T8J9 2241 aa15.34■□□□□ 0.05
DDB1-216ENST00000539739 THADAQ6YHU6 1953 aa15.33■□□□□ 0.05
DDB1-216ENST00000539739 TOR1BO14657 336 aa15.33■□□□□ 0.04
DDB1-216ENST00000539739 VAPBO95292 243 aa15.33■□□□□ 0.04
DDB1-216ENST00000539739 GNSP15586 552 aa15.33■□□□□ 0.04
DDB1-216ENST00000539739 TEAD1P28347 426 aa15.33■□□□□ 0.04
DDB1-216ENST00000539739 IGFALSP35858 605 aa15.33■□□□□ 0.04
DDB1-216ENST00000539739 RACK1P63244 317 aaKnown RBP15.33■□□□□ 0.04
DDB1-216ENST00000539739 XIAPP98170 497 aa15.33■□□□□ 0.04
DDB1-216ENST00000539739 TCF15Q12870 199 aa15.33■□□□□ 0.04
DDB1-216ENST00000539739 PEX6Q13608 980 aa15.33■□□□□ 0.04
DDB1-216ENST00000539739 INPP5AQ14642 412 aa15.33■□□□□ 0.04
DDB1-216ENST00000539739 CHRNA6Q15825 494 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms