RNA–Protein interactions for RNA: ENST00000539512.1

TRAV11-201, Transcript of T cell receptor alpha variable 11 (pseudogene), humanhuman

BASIC

Gene TRAV11, Length 339 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV11-201ENST00000539512 GOLGA6L9A6NEM1 432 aa6.62□□□□□ -1.35
TRAV11-201ENST00000539512 LRRC72A6NJI9 287 aa6.62□□□□□ -1.35
TRAV11-201ENST00000539512 AGAP14A8MT82 685 aa6.62□□□□□ -1.35
TRAV11-201ENST00000539512 PLRG1O43660 514 aaKnown RBP6.62□□□□□ -1.35
TRAV11-201ENST00000539512 OR2C1O95371 312 aa6.62□□□□□ -1.35
TRAV11-201ENST00000539512 T-ENOLP0DO92 83 aa6.62□□□□□ -1.35
TRAV11-201ENST00000539512 ANXA7P20073 488 aaKnown RBP6.62□□□□□ -1.35
TRAV11-201ENST00000539512 HOXA13P31271 388 aaPredicted RBP6.62□□□□□ -1.35
TRAV11-201ENST00000539512 DHX34Q14147 1143 aaKnown RBP6.62□□□□□ -1.35
TRAV11-201ENST00000539512 ZNF805Q5CZA5 627 aa6.62□□□□□ -1.35
TRAV11-201ENST00000539512 RAB41Q5JT25 222 aa6.62□□□□□ -1.35
TRAV11-201ENST00000539512 LRIF1Q5T3J3 769 aa6.62□□□□□ -1.35
TRAV11-201ENST00000539512 FRG2Q64ET8 278 aa6.62□□□□□ -1.35
TRAV11-201ENST00000539512 SDCCAG8Q86SQ7 713 aaPredicted RBP6.62□□□□□ -1.35
TRAV11-201ENST00000539512 ARID3BQ8IVW6 561 aaPredicted RBP6.62□□□□□ -1.35
TRAV11-201ENST00000539512 ADHFE1Q8IWW8 467 aa6.62□□□□□ -1.35
TRAV11-201ENST00000539512 CCDC89Q8N998 374 aa6.62□□□□□ -1.35
TRAV11-201ENST00000539512 OR1J2Q8NGS2 313 aa6.62□□□□□ -1.35
TRAV11-201ENST00000539512 DNAAF4Q8WXU2 420 aa6.62□□□□□ -1.35
TRAV11-201ENST00000539512 RSRC1Q96IZ7 334 aaKnown RBP6.62□□□□□ -1.35
TRAV11-201ENST00000539512 THOC3Q96J01 351 aaKnown RBP6.62□□□□□ -1.35
TRAV11-201ENST00000539512 PIGMQ9H3S5 423 aa6.62□□□□□ -1.35
TRAV11-201ENST00000539512 NOX4Q9NPH5 578 aa6.62□□□□□ -1.35
TRAV11-201ENST00000539512 COPG2Q9UBF2 871 aa6.62□□□□□ -1.35
TRAV11-201ENST00000539512 PCDHGB4Q9UN71 923 aa6.62□□□□□ -1.35
TRAV11-201ENST00000539512 CMAHPQ9Y471 501 aa6.62□□□□□ -1.35
TRAV11-201ENST00000539512 CLIC4Q9Y696 253 aa6.62□□□□□ -1.35
TRAV11-201ENST00000539512 EIF4E1BA6NMX2 242 aaKnown RBP6.61□□□□□ -1.35
TRAV11-201ENST00000539512 CDRT15L2A8MXV6 281 aa6.61□□□□□ -1.35
TRAV11-201ENST00000539512 M0QZ24 198 aa6.61□□□□□ -1.35
TRAV11-201ENST00000539512 CTDSP2O14595 271 aa6.61□□□□□ -1.35
TRAV11-201ENST00000539512 INSIG1O15503 277 aa6.61□□□□□ -1.35
TRAV11-201ENST00000539512 AHCYL1O43865 530 aa6.61□□□□□ -1.35
TRAV11-201ENST00000539512 ALPLP05186 524 aa6.61□□□□□ -1.35
TRAV11-201ENST00000539512 IGHV4-30-4P0DP06 118 aa6.61□□□□□ -1.35
TRAV11-201ENST00000539512 PON1P27169 355 aa6.61□□□□□ -1.35
TRAV11-201ENST00000539512 SSTR2P30874 369 aa6.61□□□□□ -1.35
TRAV11-201ENST00000539512 SLC15A1P46059 708 aa6.61□□□□□ -1.35
TRAV11-201ENST00000539512 HTR6P50406 440 aa6.61□□□□□ -1.35
TRAV11-201ENST00000539512 HNRNPH2P55795 449 aaKnown RBP6.61□□□□□ -1.35
TRAV11-201ENST00000539512 LINC00205P59089 165 aa6.61□□□□□ -1.35
TRAV11-201ENST00000539512 CDC16Q13042 620 aa6.61□□□□□ -1.35
TRAV11-201ENST00000539512 KCNT1Q5JUK3 1230 aa6.61□□□□□ -1.35
TRAV11-201ENST00000539512 MFSD4BQ5TF39 518 aa6.61□□□□□ -1.35
TRAV11-201ENST00000539512 CREB3L2Q70SY1 520 aa6.61□□□□□ -1.35
TRAV11-201ENST00000539512 CCDC190Q86UF4 302 aa6.61□□□□□ -1.35
TRAV11-201ENST00000539512 WFIKKN2Q8TEU8 576 aa6.61□□□□□ -1.35
TRAV11-201ENST00000539512 APBB2Q92870 758 aa6.61□□□□□ -1.35
TRAV11-201ENST00000539512 C3orf30Q96M34 536 aa6.61□□□□□ -1.35
TRAV11-201ENST00000539512 OR2A14Q96R47 310 aa6.61□□□□□ -1.35
TRAV11-201ENST00000539512 TEX12Q9BXU0 123 aa6.61□□□□□ -1.35
TRAV11-201ENST00000539512 TM6SF1Q9BZW5 370 aa6.61□□□□□ -1.35
TRAV11-201ENST00000539512 MMP25Q9NPA2 562 aa6.61□□□□□ -1.35
TRAV11-201ENST00000539512 LTB4R2Q9NPC1 389 aa6.61□□□□□ -1.35
TRAV11-201ENST00000539512 OCIAD1Q9NX40 245 aa6.61□□□□□ -1.35
TRAV11-201ENST00000539512 SUCLA2Q9P2R7 463 aaPredicted RBP6.61□□□□□ -1.35
TRAV11-201ENST00000539512 CHORDC1Q9UHD1 332 aaPredicted RBP6.61□□□□□ -1.35
TRAV11-201ENST00000539512 RPS6KA6Q9UK32 745 aa6.61□□□□□ -1.35
TRAV11-201ENST00000539512 SNX8Q9Y5X2 465 aa6.61□□□□□ -1.35
TRAV11-201ENST00000539512 MAP2K7O14733 419 aa6.6□□□□□ -1.35
TRAV11-201ENST00000539512 FIBPO43427 364 aa6.6□□□□□ -1.35
TRAV11-201ENST00000539512 FCGR1AP12314 374 aa6.6□□□□□ -1.35
TRAV11-201ENST00000539512 SRCP12931 536 aa6.6□□□□□ -1.35
TRAV11-201ENST00000539512 EIF2DP41214 584 aaKnown RBP6.6□□□□□ -1.35
TRAV11-201ENST00000539512 LMAN1P49257 510 aa6.6□□□□□ -1.35
TRAV11-201ENST00000539512 COMPP49747 757 aaPredicted RBP6.6□□□□□ -1.35
TRAV11-201ENST00000539512 GRSF1Q12849 480 aaKnown RBP eCLIP6.6□□□□□ -1.35
TRAV11-201ENST00000539512 MYLK3Q32MK0 819 aa6.6□□□□□ -1.35
TRAV11-201ENST00000539512 DLK2Q6UY11 383 aa6.6□□□□□ -1.35
TRAV11-201ENST00000539512 GPR180Q86V85 440 aa6.6□□□□□ -1.35
TRAV11-201ENST00000539512 NEUROG1Q92886 237 aa6.6□□□□□ -1.35
TRAV11-201ENST00000539512 PPP1R13BQ96KQ4 1090 aa6.6□□□□□ -1.35
TRAV11-201ENST00000539512 GAD1Q99259 594 aa6.6□□□□□ -1.35
TRAV11-201ENST00000539512 ZPBPQ9BS86 351 aa6.6□□□□□ -1.35
TRAV11-201ENST00000539512 HRH4Q9H3N8 390 aa6.6□□□□□ -1.35
TRAV11-201ENST00000539512 EPB41L5Q9HCM4 733 aa6.6□□□□□ -1.35
TRAV11-201ENST00000539512 IGLV5-37A0A075B6J1 123 aa6.59□□□□□ -1.35
TRAV11-201ENST00000539512 IGLV5-52A0A0A0MRZ9 124 aa6.59□□□□□ -1.35
TRAV11-201ENST00000539512 CPED1A4D0V7 1026 aa6.59□□□□□ -1.35
TRAV11-201ENST00000539512 NGFRP08138 427 aa6.59□□□□□ -1.35
TRAV11-201ENST00000539512 ITGB8P26012 769 aa6.59□□□□□ -1.35
TRAV11-201ENST00000539512 MSH2P43246 934 aa6.59□□□□□ -1.35
TRAV11-201ENST00000539512 TAS2R38P59533 333 aa6.59□□□□□ -1.35
TRAV11-201ENST00000539512 CALD1Q05682 793 aaKnown RBP6.59□□□□□ -1.35
TRAV11-201ENST00000539512 SREBF2Q12772 1141 aa6.59□□□□□ -1.35
TRAV11-201ENST00000539512 STK4Q13043 487 aa6.59□□□□□ -1.35
TRAV11-201ENST00000539512 MYBPHQ13203 477 aa6.59□□□□□ -1.35
TRAV11-201ENST00000539512 KCNC3Q14003 757 aa6.59□□□□□ -1.35
TRAV11-201ENST00000539512 IRF3Q14653 427 aa6.59□□□□□ -1.35
TRAV11-201ENST00000539512 CLIP4Q8N3C7 705 aa6.59□□□□□ -1.35
TRAV11-201ENST00000539512 PGBD5Q8N414 524 aa6.59□□□□□ -1.35
TRAV11-201ENST00000539512 PCDH20Q8N6Y1 951 aaKnown RBP6.59□□□□□ -1.35
TRAV11-201ENST00000539512 POC5Q8NA72 575 aa6.59□□□□□ -1.35
TRAV11-201ENST00000539512 HJURPQ8NCD3 748 aaPredicted RBP6.59□□□□□ -1.35
TRAV11-201ENST00000539512 B4GALNT2Q8NHY0 566 aa6.59□□□□□ -1.35
TRAV11-201ENST00000539512 HM13Q8TCT9 377 aa6.59□□□□□ -1.35
TRAV11-201ENST00000539512 LYZL4Q96KX0 146 aa6.59□□□□□ -1.35
TRAV11-201ENST00000539512 FIZ1Q96SL8 496 aa6.59□□□□□ -1.35
TRAV11-201ENST00000539512 CSF3RQ99062 836 aa6.59□□□□□ -1.35
TRAV11-201ENST00000539512 SRSF8Q9BRL6 282 aaKnown RBP6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms