RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 NSUN5Q96P11 429 aaKnown RBP13.95□□□□□ -0.18
LIMK1-208ENST00000538333 GPR21Q99679 349 aa13.95□□□□□ -0.18
LIMK1-208ENST00000538333 SLC30A3Q99726 388 aa13.95□□□□□ -0.18
LIMK1-208ENST00000538333 CCDC68Q9H2F9 335 aa13.95□□□□□ -0.18
LIMK1-208ENST00000538333 IL21Q9HBE4 155 aa13.95□□□□□ -0.18
LIMK1-208ENST00000538333 H0Y626 953 aa13.95□□□□□ -0.18
LIMK1-208ENST00000538333 FBP2O00757 339 aa13.95□□□□□ -0.18
LIMK1-208ENST00000538333 PRRG1O14668 218 aa13.95□□□□□ -0.18
LIMK1-208ENST00000538333 CFLARO15519 480 aa13.95□□□□□ -0.18
LIMK1-208ENST00000538333 TSPAN12O95859 305 aa13.95□□□□□ -0.18
LIMK1-208ENST00000538333 ALDOCP09972 364 aaKnown RBP13.95□□□□□ -0.18
LIMK1-208ENST00000538333 PSMD8P48556 350 aa13.95□□□□□ -0.18
LIMK1-208ENST00000538333 ATP4BP51164 291 aa13.95□□□□□ -0.18
LIMK1-208ENST00000538333 ATP6V0D1P61421 351 aa13.95□□□□□ -0.18
LIMK1-208ENST00000538333 MS4A2Q01362 244 aa13.95□□□□□ -0.18
LIMK1-208ENST00000538333 LRP8Q14114 963 aa13.95□□□□□ -0.18
LIMK1-208ENST00000538333 CTSL3PQ5NE16 218 aa13.95□□□□□ -0.18
LIMK1-208ENST00000538333 SPOUT1Q5T280 376 aaKnown RBP13.95□□□□□ -0.18
LIMK1-208ENST00000538333 RAB44Q7Z6P3 723 aaPredicted RBP13.95□□□□□ -0.18
LIMK1-208ENST00000538333 TMCO2Q7Z6W1 182 aaPredicted RBP13.95□□□□□ -0.18
LIMK1-208ENST00000538333 CARNMT1Q8N4J0 409 aa13.95□□□□□ -0.18
LIMK1-208ENST00000538333 USP13Q92995 863 aaPredicted RBP13.95□□□□□ -0.18
LIMK1-208ENST00000538333 FUBP1Q96AE4 644 aaKnown RBP13.95□□□□□ -0.18
LIMK1-208ENST00000538333 ZDHHC7Q9NXF8 308 aa13.95□□□□□ -0.18
LIMK1-208ENST00000538333 VPS51Q9UID3 782 aa13.95□□□□□ -0.18
LIMK1-208ENST00000538333 SARDHQ9UL12 918 aa13.95□□□□□ -0.18
LIMK1-208ENST00000538333 TBX21Q9UL17 535 aa13.95□□□□□ -0.18
LIMK1-208ENST00000538333 VPS9D1Q9Y2B5 631 aa13.95□□□□□ -0.18
LIMK1-208ENST00000538333 PCDHGA7Q9Y5G6 932 aa13.95□□□□□ -0.18
LIMK1-208ENST00000538333 INSL5Q9Y5Q6 135 aa13.95□□□□□ -0.18
LIMK1-208ENST00000538333 A0A0U1RQS6 177 aa13.94□□□□□ -0.18
LIMK1-208ENST00000538333 ATP6AP2A0A1C7CYW4 349 aa13.94□□□□□ -0.18
LIMK1-208ENST00000538333 OR1I1O60431 355 aa13.94□□□□□ -0.18
LIMK1-208ENST00000538333 CLASP2O75122 1294 aaKnown RBP13.94□□□□□ -0.18
LIMK1-208ENST00000538333 ATP6AP2O75787 350 aa13.94□□□□□ -0.18
LIMK1-208ENST00000538333 PKMP14618 531 aaKnown RBP13.94□□□□□ -0.18
LIMK1-208ENST00000538333 ME2P23368 584 aa13.94□□□□□ -0.18
LIMK1-208ENST00000538333 TTPAP49638 278 aa13.94□□□□□ -0.18
LIMK1-208ENST00000538333 FOXA1P55317 472 aa13.94□□□□□ -0.18
LIMK1-208ENST00000538333 RAD51Q06609 339 aa13.94□□□□□ -0.18
LIMK1-208ENST00000538333 FLOT2Q14254 428 aa13.94□□□□□ -0.18
LIMK1-208ENST00000538333 MAPRE2Q15555 327 aa13.94□□□□□ -0.18
LIMK1-208ENST00000538333 TSNQ15631 228 aaKnown RBP13.94□□□□□ -0.18
LIMK1-208ENST00000538333 AGKQ53H12 422 aa13.94□□□□□ -0.18
LIMK1-208ENST00000538333 KANK2Q63ZY3 851 aa13.94□□□□□ -0.18
LIMK1-208ENST00000538333 FAM217AQ8IXS0 508 aa13.94□□□□□ -0.18
LIMK1-208ENST00000538333 EFHBQ8N7U6 833 aa13.94□□□□□ -0.18
LIMK1-208ENST00000538333 HJURPQ8NCD3 748 aaPredicted RBP13.94□□□□□ -0.18
LIMK1-208ENST00000538333 AUTS2Q8WXX7 1259 aa13.94□□□□□ -0.18
LIMK1-208ENST00000538333 GATA6Q92908 595 aa13.94□□□□□ -0.18
LIMK1-208ENST00000538333 TMA16Q96EY4 203 aaKnown RBP13.94□□□□□ -0.18
LIMK1-208ENST00000538333 MRPL1Q9BYD6 325 aaKnown RBP13.94□□□□□ -0.18
LIMK1-208ENST00000538333 FBRSL1Q9HCM7 1045 aaKnown RBP13.94□□□□□ -0.18
LIMK1-208ENST00000538333 BPIFA1Q9NP55 256 aa13.94□□□□□ -0.18
LIMK1-208ENST00000538333 MID1IP1Q9NPA3 183 aa13.94□□□□□ -0.18
LIMK1-208ENST00000538333 CACNA2D2Q9NY47 1150 aa13.94□□□□□ -0.18
LIMK1-208ENST00000538333 CCDC167Q9P0B6 97 aa13.94□□□□□ -0.18
LIMK1-208ENST00000538333 PSMD13Q9UNM6 376 aa13.94□□□□□ -0.18
LIMK1-208ENST00000538333 ANKRD12Q6UB98 2062 aa13.94□□□□□ -0.18
LIMK1-208ENST00000538333 A0A1B0GTL3 188 aa13.93□□□□□ -0.18
LIMK1-208ENST00000538333 CDC7O00311 574 aa13.93□□□□□ -0.18
LIMK1-208ENST00000538333 ACOT8O14734 319 aa13.93□□□□□ -0.18
LIMK1-208ENST00000538333 AZIN1O14977 448 aa13.93□□□□□ -0.18
LIMK1-208ENST00000538333 STX7O15400 261 aaKnown RBP13.93□□□□□ -0.18
LIMK1-208ENST00000538333 KLK8O60259 260 aa13.93□□□□□ -0.18
LIMK1-208ENST00000538333 GPC4O75487 556 aa13.93□□□□□ -0.18
LIMK1-208ENST00000538333 ECI2O75521 394 aa13.93□□□□□ -0.18
LIMK1-208ENST00000538333 PRAMEF12O95522 483 aa13.93□□□□□ -0.18
LIMK1-208ENST00000538333 MT-CO1P00395 513 aa13.93□□□□□ -0.18
LIMK1-208ENST00000538333 RPS17P08708 135 aaKnown RBP13.93□□□□□ -0.18
LIMK1-208ENST00000538333 GFAPP14136 432 aa13.93□□□□□ -0.18
LIMK1-208ENST00000538333 HDCP19113 662 aa13.93□□□□□ -0.18
LIMK1-208ENST00000538333 PEX2P28328 305 aa13.93□□□□□ -0.18
LIMK1-208ENST00000538333 MSX2P35548 267 aaPredicted RBP13.93□□□□□ -0.18
LIMK1-208ENST00000538333 CSKP41240 450 aa13.93□□□□□ -0.18
LIMK1-208ENST00000538333 CLCN4P51793 760 aa13.93□□□□□ -0.18
LIMK1-208ENST00000538333 ADARP55265 1226 aaKnown RBP13.93□□□□□ -0.18
LIMK1-208ENST00000538333 XIAPP98170 497 aa13.93□□□□□ -0.18
LIMK1-208ENST00000538333 STX5Q13190 355 aa13.93□□□□□ -0.18
LIMK1-208ENST00000538333 LPCAT4Q643R3 524 aa13.93□□□□□ -0.18
LIMK1-208ENST00000538333 REP15Q6BDI9 236 aa13.93□□□□□ -0.18
LIMK1-208ENST00000538333 PDSS2Q86YH6 399 aa13.93□□□□□ -0.18
LIMK1-208ENST00000538333 ARL14EPQ8N8R7 260 aaPredicted RBP13.93□□□□□ -0.18
LIMK1-208ENST00000538333 MICAL1Q8TDZ2 1067 aa13.93□□□□□ -0.18
LIMK1-208ENST00000538333 GDPD5Q8WTR4 605 aa13.93□□□□□ -0.18
LIMK1-208ENST00000538333 EID2BQ96D98 161 aa13.93□□□□□ -0.18
LIMK1-208ENST00000538333 C1QTNF3Q9BXJ4 246 aa13.93□□□□□ -0.18
LIMK1-208ENST00000538333 RNF208Q9H0X6 261 aa13.93□□□□□ -0.18
LIMK1-208ENST00000538333 AKTIPQ9H8T0 292 aa13.93□□□□□ -0.18
LIMK1-208ENST00000538333 GEMIN8Q9NWZ8 242 aaKnown RBP13.93□□□□□ -0.18
LIMK1-208ENST00000538333 HACD3Q9P035 362 aa13.93□□□□□ -0.18
LIMK1-208ENST00000538333 IL17CQ9P0M4 197 aa13.93□□□□□ -0.18
LIMK1-208ENST00000538333 RNF112Q9ULX5 631 aa13.93□□□□□ -0.18
LIMK1-208ENST00000538333 FCF1Q9Y324 198 aaKnown RBP13.93□□□□□ -0.18
LIMK1-208ENST00000538333 SCN8AQ9UQD0 1980 aa13.93□□□□□ -0.18
LIMK1-208ENST00000538333 SUPT3HB4E1H0 165 aa13.93□□□□□ -0.18
LIMK1-208ENST00000538333 NIPSNAP2O75323 286 aa13.93□□□□□ -0.18
LIMK1-208ENST00000538333 SUPT3HO75486 399 aa13.93□□□□□ -0.18
LIMK1-208ENST00000538333 BCAS2O75934 225 aaPredicted RBP13.93□□□□□ -0.18
LIMK1-208ENST00000538333 URODP06132 367 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms