RNA–Protein interactions for RNA: ENST00000538280.1

DDB1-211, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 227 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-211ENST00000538280 STC2O76061 302 aa9.22□□□□□ -0.93
DDB1-211ENST00000538280 GJB5O95377 273 aa9.22□□□□□ -0.93
DDB1-211ENST00000538280 BAG2O95816 211 aa9.22□□□□□ -0.93
DDB1-211ENST00000538280 LATS1O95835 1130 aa9.22□□□□□ -0.93
DDB1-211ENST00000538280 PRLP01236 227 aa9.22□□□□□ -0.93
DDB1-211ENST00000538280 PDHA1P08559 390 aa9.22□□□□□ -0.93
DDB1-211ENST00000538280 HMGA1P17096 107 aaKnown RBP9.22□□□□□ -0.93
DDB1-211ENST00000538280 XRCC1P18887 633 aaPredicted RBP9.22□□□□□ -0.93
DDB1-211ENST00000538280 ME2P23368 584 aa9.22□□□□□ -0.93
DDB1-211ENST00000538280 SLC11A2P49281 568 aa9.22□□□□□ -0.93
DDB1-211ENST00000538280 MRPL19P49406 292 aaKnown RBP9.22□□□□□ -0.93
DDB1-211ENST00000538280 TUFMP49411 452 aaKnown RBP9.22□□□□□ -0.93
DDB1-211ENST00000538280 ACADVLP49748 655 aa9.22□□□□□ -0.93
DDB1-211ENST00000538280 OXCT1P55809 520 aa9.22□□□□□ -0.93
DDB1-211ENST00000538280 ERVK-21P61565 698 aa9.22□□□□□ -0.93
DDB1-211ENST00000538280 NAA20P61599 178 aa9.22□□□□□ -0.93
DDB1-211ENST00000538280 HERVK_113P63132 956 aa9.22□□□□□ -0.93
DDB1-211ENST00000538280 LRP8Q14114 963 aa9.22□□□□□ -0.93
DDB1-211ENST00000538280 GALNT3Q14435 633 aa9.22□□□□□ -0.93
DDB1-211ENST00000538280 TAF1AQ15573 450 aaPredicted RBP9.22□□□□□ -0.93
DDB1-211ENST00000538280 TCHHL1Q5QJ38 904 aaPredicted RBP9.22□□□□□ -0.93
DDB1-211ENST00000538280 IRAK1BP1Q5VVH5 260 aa9.22□□□□□ -0.93
DDB1-211ENST00000538280 NXNQ6DKJ4 435 aa9.22□□□□□ -0.93
DDB1-211ENST00000538280 CAPRIN2Q6IMN6 1127 aaKnown RBP9.22□□□□□ -0.93
DDB1-211ENST00000538280 ZFP1Q6P2D0 407 aa9.22□□□□□ -0.93
DDB1-211ENST00000538280 TMEM154Q6P9G4 183 aa9.22□□□□□ -0.93
DDB1-211ENST00000538280 CNKSR3Q6P9H4 555 aa9.22□□□□□ -0.93
DDB1-211ENST00000538280 PRSS55Q6UWB4 352 aaPredicted RBP9.22□□□□□ -0.93
DDB1-211ENST00000538280 ZNF783Q6ZMS7 281 aa9.22□□□□□ -0.93
DDB1-211ENST00000538280 GK5Q6ZS86 529 aa9.22□□□□□ -0.93
DDB1-211ENST00000538280 ZNF354CQ86Y25 554 aa9.22□□□□□ -0.93
DDB1-211ENST00000538280 TICAM1Q8IUC6 712 aa9.22□□□□□ -0.93
DDB1-211ENST00000538280 RNF135Q8IUD6 432 aa9.22□□□□□ -0.93
DDB1-211ENST00000538280 LRRC43Q8N309 656 aa9.22□□□□□ -0.93
DDB1-211ENST00000538280 PLCD3Q8N3E9 789 aa9.22□□□□□ -0.93
DDB1-211ENST00000538280 EFCAB3Q8N7B9 438 aa9.22□□□□□ -0.93
DDB1-211ENST00000538280 PNPLA1Q8N8W4 532 aa9.22□□□□□ -0.93
DDB1-211ENST00000538280 BLOC1S5Q8TDH9 187 aa9.22□□□□□ -0.93
DDB1-211ENST00000538280 MICAL1Q8TDZ2 1067 aa9.22□□□□□ -0.93
DDB1-211ENST00000538280 TOP1MTQ969P6 601 aa9.22□□□□□ -0.93
DDB1-211ENST00000538280 CCDC124Q96CT7 223 aaKnown RBP9.22□□□□□ -0.93
DDB1-211ENST00000538280 DUS3LQ96G46 650 aaKnown RBP9.22□□□□□ -0.93
DDB1-211ENST00000538280 TRMT2BQ96GJ1 504 aaKnown RBP9.22□□□□□ -0.93
DDB1-211ENST00000538280 MARK4Q96L34 752 aa9.22□□□□□ -0.93
DDB1-211ENST00000538280 PPP1R36Q96LQ0 422 aa9.22□□□□□ -0.93
DDB1-211ENST00000538280 BTBD9Q96Q07 612 aa9.22□□□□□ -0.93
DDB1-211ENST00000538280 CYP2S1Q96SQ9 504 aa9.22□□□□□ -0.93
DDB1-211ENST00000538280 TCF12Q99081 682 aa9.22□□□□□ -0.93
DDB1-211ENST00000538280 VN1R3Q9BXE9 311 aa9.22□□□□□ -0.93
DDB1-211ENST00000538280 C1QTNF3Q9BXJ4 246 aa9.22□□□□□ -0.93
DDB1-211ENST00000538280 KLF16Q9BXK1 252 aaPredicted RBP9.22□□□□□ -0.93
DDB1-211ENST00000538280 ERVK-6Q9BXR3 956 aa9.22□□□□□ -0.93
DDB1-211ENST00000538280 KLHL4Q9C0H6 718 aa9.22□□□□□ -0.93
DDB1-211ENST00000538280 DERL2Q9GZP9 239 aa9.22□□□□□ -0.93
DDB1-211ENST00000538280 ALG9Q9H6U8 611 aa9.22□□□□□ -0.93
DDB1-211ENST00000538280 SUDS3Q9H7L9 328 aaPredicted RBP9.22□□□□□ -0.93
DDB1-211ENST00000538280 SUCOQ9UBS9 1254 aaKnown RBP9.22□□□□□ -0.93
DDB1-211ENST00000538280 AFF4Q9UHB7 1163 aaKnown RBP9.22□□□□□ -0.93
DDB1-211ENST00000538280 BCAP29Q9UHQ4 241 aa9.22□□□□□ -0.93
DDB1-211ENST00000538280 RIMS3Q9UJD0 308 aa9.22□□□□□ -0.93
DDB1-211ENST00000538280 STOML2Q9UJZ1 356 aa9.22□□□□□ -0.93
DDB1-211ENST00000538280 LRFN2Q9ULH4 789 aa9.22□□□□□ -0.93
DDB1-211ENST00000538280 G3BP2Q9UN86 482 aaKnown RBP9.22□□□□□ -0.93
DDB1-211ENST00000538280 TRAF6Q9Y4K3 522 aa9.22□□□□□ -0.93
DDB1-211ENST00000538280 PCDHGA7Q9Y5G6 932 aa9.22□□□□□ -0.93
DDB1-211ENST00000538280 USP34Q70CQ2 3546 aa9.22□□□□□ -0.93
DDB1-211ENST00000538280 OBSL1O75147 1896 aa9.21□□□□□ -0.93
DDB1-211ENST00000538280 A0A1B0GVM2 712 aa9.21□□□□□ -0.94
DDB1-211ENST00000538280 TBKBP1A7MCY6 615 aa9.21□□□□□ -0.94
DDB1-211ENST00000538280 H7C0S8 307 aa9.21□□□□□ -0.94
DDB1-211ENST00000538280 FBP2O00757 339 aa9.21□□□□□ -0.94
DDB1-211ENST00000538280 TRIM24O15164 1050 aa9.21□□□□□ -0.94
DDB1-211ENST00000538280 COCHO43405 550 aa9.21□□□□□ -0.94
DDB1-211ENST00000538280 KERAO60938 352 aa9.21□□□□□ -0.94
DDB1-211ENST00000538280 SKAP2O75563 359 aaPredicted RBP9.21□□□□□ -0.94
DDB1-211ENST00000538280 CDK14O94921 469 aa9.21□□□□□ -0.94
DDB1-211ENST00000538280 ABLIM3O94929 683 aa9.21□□□□□ -0.94
DDB1-211ENST00000538280 CRTAMO95727 393 aa9.21□□□□□ -0.94
DDB1-211ENST00000538280 CD160O95971 181 aa9.21□□□□□ -0.94
DDB1-211ENST00000538280 KLKB1P03952 638 aa9.21□□□□□ -0.94
DDB1-211ENST00000538280 RHOCP08134 193 aa9.21□□□□□ -0.94
DDB1-211ENST00000538280 RPS17P08708 135 aaKnown RBP9.21□□□□□ -0.94
DDB1-211ENST00000538280 ENO3P13929 434 aaPredicted RBP9.21□□□□□ -0.94
DDB1-211ENST00000538280 UQCRBP14927 111 aa9.21□□□□□ -0.94
DDB1-211ENST00000538280 PEX2P28328 305 aa9.21□□□□□ -0.94
DDB1-211ENST00000538280 ERFP50548 548 aa9.21□□□□□ -0.94
DDB1-211ENST00000538280 SGSHP51688 502 aa9.21□□□□□ -0.94
DDB1-211ENST00000538280 PLK1P53350 603 aa9.21□□□□□ -0.94
DDB1-211ENST00000538280 ATP6V0D1P61421 351 aa9.21□□□□□ -0.94
DDB1-211ENST00000538280 STX5Q13190 355 aa9.21□□□□□ -0.94
DDB1-211ENST00000538280 PTPRCAPQ14761 206 aa9.21□□□□□ -0.94
DDB1-211ENST00000538280 OR4D1Q15615 310 aa9.21□□□□□ -0.94
DDB1-211ENST00000538280 LEXMQ3ZCV2 418 aa9.21□□□□□ -0.94
DDB1-211ENST00000538280 HECTD3Q5T447 861 aa9.21□□□□□ -0.94
DDB1-211ENST00000538280 KANK2Q63ZY3 851 aa9.21□□□□□ -0.94
DDB1-211ENST00000538280 LPCAT4Q643R3 524 aa9.21□□□□□ -0.94
DDB1-211ENST00000538280 REP15Q6BDI9 236 aa9.21□□□□□ -0.94
DDB1-211ENST00000538280 PTCRAQ6ISU1 281 aaPredicted RBP9.21□□□□□ -0.94
DDB1-211ENST00000538280 CXorf57Q6NSI4 855 aaKnown RBP9.21□□□□□ -0.94
DDB1-211ENST00000538280 SDCCAG8Q86SQ7 713 aaPredicted RBP9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms