RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 PARP6Q2NL67 630 aa7.22□□□□□ -1.25
MSH6-209ENST00000538136 FAM153CQ494X1 144 aa7.22□□□□□ -1.25
MSH6-209ENST00000538136 TAF1BQ53T94 588 aaPredicted RBP7.22□□□□□ -1.25
MSH6-209ENST00000538136 PRSS36Q5K4E3 855 aa7.22□□□□□ -1.25
MSH6-209ENST00000538136 SERPINA9Q86WD7 417 aa7.22□□□□□ -1.25
MSH6-209ENST00000538136 DOK4Q8TEW6 326 aa7.22□□□□□ -1.25
MSH6-209ENST00000538136 OVCA2Q8WZ82 227 aa7.22□□□□□ -1.25
MSH6-209ENST00000538136 NTAN1Q96AB6 310 aa7.22□□□□□ -1.25
MSH6-209ENST00000538136 MAGED4Q96JG8 741 aa7.22□□□□□ -1.25
MSH6-209ENST00000538136 TM7SF3Q9NS93 570 aa7.22□□□□□ -1.25
MSH6-209ENST00000538136 TMEM248Q9NWD8 314 aa7.22□□□□□ -1.25
MSH6-209ENST00000538136 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.22□□□□□ -1.25
MSH6-209ENST00000538136 CTNNAL1Q9UBT7 734 aa7.22□□□□□ -1.25
MSH6-209ENST00000538136 NCANO14594 1321 aa7.21□□□□□ -1.25
MSH6-209ENST00000538136 K7ESM1 405 aa7.21□□□□□ -1.25
MSH6-209ENST00000538136 TIMM44O43615 452 aa7.21□□□□□ -1.25
MSH6-209ENST00000538136 MAFKO60675 156 aa7.21□□□□□ -1.25
MSH6-209ENST00000538136 NIPSNAP2O75323 286 aa7.21□□□□□ -1.25
MSH6-209ENST00000538136 POP7O75817 140 aaKnown RBP7.21□□□□□ -1.25
MSH6-209ENST00000538136 TCEA1P23193 301 aaKnown RBP7.21□□□□□ -1.25
MSH6-209ENST00000538136 NOVA1P51513 510 aaKnown RBP7.21□□□□□ -1.25
MSH6-209ENST00000538136 RBBP5Q15291 538 aaKnown RBP7.21□□□□□ -1.25
MSH6-209ENST00000538136 CYTH1Q15438 398 aa7.21□□□□□ -1.25
MSH6-209ENST00000538136 POTEHQ6S545 545 aa7.21□□□□□ -1.25
MSH6-209ENST00000538136 LINC00523Q86TU6 105 aa7.21□□□□□ -1.25
MSH6-209ENST00000538136 CREG2Q8IUH2 290 aa7.21□□□□□ -1.25
MSH6-209ENST00000538136 UBALD2Q8IYN6 164 aa7.21□□□□□ -1.25
MSH6-209ENST00000538136 CRIPAKQ8N1N5 446 aa7.21□□□□□ -1.25
MSH6-209ENST00000538136 SDR16C5Q8N3Y7 309 aa7.21□□□□□ -1.25
MSH6-209ENST00000538136 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.21□□□□□ -1.25
MSH6-209ENST00000538136 CASKIN2Q8WXE0 1202 aa7.21□□□□□ -1.25
MSH6-209ENST00000538136 TRIM54Q9BYV2 358 aa7.21□□□□□ -1.25
MSH6-209ENST00000538136 FAM114A2Q9NRY5 505 aa7.21□□□□□ -1.25
MSH6-209ENST00000538136 WWOXQ9NZC7 414 aa7.21□□□□□ -1.25
MSH6-209ENST00000538136 DUSP12Q9UNI6 340 aa7.21□□□□□ -1.25
MSH6-209ENST00000538136 WASF2Q9Y6W5 498 aa7.21□□□□□ -1.25
MSH6-209ENST00000538136 MYH15Q9Y2K3 1946 aa7.21□□□□□ -1.25
MSH6-209ENST00000538136 PARP14Q460N5 1801 aa7.21□□□□□ -1.26
MSH6-209ENST00000538136 MYOCOSA0A1B0GUC4 107 aa7.21□□□□□ -1.26
MSH6-209ENST00000538136 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.21□□□□□ -1.26
MSH6-209ENST00000538136 ERICH4A6NGS2 130 aa7.21□□□□□ -1.26
MSH6-209ENST00000538136 FFAR3O14843 346 aa7.21□□□□□ -1.26
MSH6-209ENST00000538136 GPR42O15529 346 aa7.21□□□□□ -1.26
MSH6-209ENST00000538136 CCNT2O60583 730 aaKnown RBP7.21□□□□□ -1.26
MSH6-209ENST00000538136 ZNF7P17097 686 aaPredicted RBP7.21□□□□□ -1.26
MSH6-209ENST00000538136 GABRG2P18507 467 aa7.21□□□□□ -1.26
MSH6-209ENST00000538136 NDST2P52849 883 aa7.21□□□□□ -1.26
MSH6-209ENST00000538136 NME5P56597 212 aa7.21□□□□□ -1.26
MSH6-209ENST00000538136 MLIPQ5VWP3 458 aa7.21□□□□□ -1.26
MSH6-209ENST00000538136 FOXR2Q6PJQ5 311 aa7.21□□□□□ -1.26
MSH6-209ENST00000538136 TAOK1Q7L7X3 1001 aa7.21□□□□□ -1.26
MSH6-209ENST00000538136 ADIPOR2Q86V24 386 aa7.21□□□□□ -1.26
MSH6-209ENST00000538136 PPFIBP2Q8ND30 876 aa7.21□□□□□ -1.26
MSH6-209ENST00000538136 CCL4L1Q8NHW4 92 aa7.21□□□□□ -1.26
MSH6-209ENST00000538136 RFWD2Q8NHY2 731 aa7.21□□□□□ -1.26
MSH6-209ENST00000538136 SLC39A13Q96H72 371 aa7.21□□□□□ -1.26
MSH6-209ENST00000538136 HES6Q96HZ4 224 aa7.21□□□□□ -1.26
MSH6-209ENST00000538136 LMLNQ96KR4 655 aa7.21□□□□□ -1.26
MSH6-209ENST00000538136 CPEB1Q9BZB8 566 aaKnown RBP7.21□□□□□ -1.26
MSH6-209ENST00000538136 CATSPERZQ9NTU4 200 aa7.21□□□□□ -1.26
MSH6-209ENST00000538136 TRHDEQ9UKU6 1024 aa7.21□□□□□ -1.26
MSH6-209ENST00000538136 MED13LQ71F56 2210 aa7.21□□□□□ -1.26
MSH6-209ENST00000538136 TLN1Q9Y490 2541 aaKnown RBP7.21□□□□□ -1.26
MSH6-209ENST00000538136 CCDC162PA2VCL2 907 aa7.21□□□□□ -1.26
MSH6-209ENST00000538136 FSCN2O14926 492 aa7.21□□□□□ -1.26
MSH6-209ENST00000538136 CACNG3O60359 315 aa7.21□□□□□ -1.26
MSH6-209ENST00000538136 IVLP07476 585 aa7.21□□□□□ -1.26
MSH6-209ENST00000538136 FAM163BP0C2L3 166 aa7.21□□□□□ -1.26
MSH6-209ENST00000538136 HNRNPLP14866 589 aaKnown RBP eCLIP7.21□□□□□ -1.26
MSH6-209ENST00000538136 CDH3P22223 829 aa7.21□□□□□ -1.26
MSH6-209ENST00000538136 P2RY2P41231 377 aa7.21□□□□□ -1.26
MSH6-209ENST00000538136 GABRB2P47870 512 aa7.21□□□□□ -1.26
MSH6-209ENST00000538136 PMS2P54278 862 aa7.21□□□□□ -1.26
MSH6-209ENST00000538136 EIF4HQ15056 248 aaKnown RBP7.21□□□□□ -1.26
MSH6-209ENST00000538136 CTC1Q2NKJ3 1217 aa7.21□□□□□ -1.26
MSH6-209ENST00000538136 DEFB110Q30KQ9 67 aa7.21□□□□□ -1.26
MSH6-209ENST00000538136 KBTBD12Q3ZCT8 623 aa7.21□□□□□ -1.26
MSH6-209ENST00000538136 TTC39BQ5VTQ0 682 aaPredicted RBP7.21□□□□□ -1.26
MSH6-209ENST00000538136 SUSD1Q6UWL2 747 aa7.21□□□□□ -1.26
MSH6-209ENST00000538136 SLC41A1Q8IVJ1 513 aa7.21□□□□□ -1.26
MSH6-209ENST00000538136 UBR7Q8N806 425 aa7.21□□□□□ -1.26
MSH6-209ENST00000538136 LRRC57Q8N9N7 239 aa7.21□□□□□ -1.26
MSH6-209ENST00000538136 BBOF1Q8ND07 529 aa7.21□□□□□ -1.26
MSH6-209ENST00000538136 IL17FQ96PD4 163 aa7.21□□□□□ -1.26
MSH6-209ENST00000538136 PKMYT1Q99640 499 aa7.21□□□□□ -1.26
MSH6-209ENST00000538136 SLC25A51Q9H1U9 297 aa7.21□□□□□ -1.26
MSH6-209ENST00000538136 ARL15Q9NXU5 204 aa7.21□□□□□ -1.26
MSH6-209ENST00000538136 RNF14Q9UBS8 474 aa7.21□□□□□ -1.26
MSH6-209ENST00000538136 CNTN6Q9UQ52 1028 aa7.21□□□□□ -1.26
MSH6-209ENST00000538136 PLAAQ9Y263 795 aa7.21□□□□□ -1.26
MSH6-209ENST00000538136 LOC285556D6RIA3 1793 aa7.21□□□□□ -1.26
MSH6-209ENST00000538136 SUPT7LO94864 414 aa7.2□□□□□ -1.26
MSH6-209ENST00000538136 LINC00271P0C7V0 271 aa7.2□□□□□ -1.26
MSH6-209ENST00000538136 CCNCP24863 283 aa7.2□□□□□ -1.26
MSH6-209ENST00000538136 STX2P32856 288 aa7.2□□□□□ -1.26
MSH6-209ENST00000538136 FDFT1P37268 417 aa7.2□□□□□ -1.26
MSH6-209ENST00000538136 CDH13P55290 713 aa7.2□□□□□ -1.26
MSH6-209ENST00000538136 RBBP7Q16576 425 aa7.2□□□□□ -1.26
MSH6-209ENST00000538136 DEFB124Q8NES8 71 aa7.2□□□□□ -1.26
MSH6-209ENST00000538136 OR13H1Q8NG92 308 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 104.5 ms