RNA–Protein interactions for RNA: ENST00000536255.6

RPAIN-205, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-205ENST00000536255 SLCO6A1Q86UG4 719 aa13.48□□□□□ -0.25
RPAIN-205ENST00000536255 PNPLA1Q8N8W4 532 aa13.48□□□□□ -0.25
RPAIN-205ENST00000536255 DNAAF3Q8N9W5 541 aa13.48□□□□□ -0.25
RPAIN-205ENST00000536255 PLA2G15Q8NCC3 412 aa13.48□□□□□ -0.25
RPAIN-205ENST00000536255 ZNF548Q8NEK5 533 aaPredicted RBP13.48□□□□□ -0.25
RPAIN-205ENST00000536255 BRSK1Q8TDC3 778 aa13.48□□□□□ -0.25
RPAIN-205ENST00000536255 CNDP2Q96KP4 475 aaKnown RBP13.48□□□□□ -0.25
RPAIN-205ENST00000536255 APOL2Q9BQE5 337 aa13.48□□□□□ -0.25
RPAIN-205ENST00000536255 APOOQ9BUR5 198 aa13.48□□□□□ -0.25
RPAIN-205ENST00000536255 DDX47Q9H0S4 455 aaKnown RBP13.48□□□□□ -0.25
RPAIN-205ENST00000536255 ABCG8Q9H221 673 aa13.48□□□□□ -0.25
RPAIN-205ENST00000536255 FAM83DQ9H4H8 585 aa13.48□□□□□ -0.25
RPAIN-205ENST00000536255 WDR26Q9H7D7 661 aa13.48□□□□□ -0.25
RPAIN-205ENST00000536255 PHPT1Q9NRX4 125 aaPredicted RBP13.48□□□□□ -0.25
RPAIN-205ENST00000536255 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.48□□□□□ -0.25
RPAIN-205ENST00000536255 KLF15Q9UIH9 416 aa13.48□□□□□ -0.25
RPAIN-205ENST00000536255 OR1A2Q9Y585 309 aa13.48□□□□□ -0.25
RPAIN-205ENST00000536255 SPO11Q9Y5K1 396 aa13.48□□□□□ -0.25
RPAIN-205ENST00000536255 A0A0U1RQS6 177 aa13.47□□□□□ -0.25
RPAIN-205ENST00000536255 TRIM38O00635 465 aa13.47□□□□□ -0.25
RPAIN-205ENST00000536255 FFAR2O15552 330 aa13.47□□□□□ -0.25
RPAIN-205ENST00000536255 HYAL3O43820 417 aaPredicted RBP13.47□□□□□ -0.25
RPAIN-205ENST00000536255 DKK1O94907 266 aa13.47□□□□□ -0.25
RPAIN-205ENST00000536255 TOP3BO95985 862 aaKnown RBP13.47□□□□□ -0.25
RPAIN-205ENST00000536255 HOXC4P09017 264 aaPredicted RBP13.47□□□□□ -0.25
RPAIN-205ENST00000536255 TRIM23P36406 574 aa13.47□□□□□ -0.25
RPAIN-205ENST00000536255 SARNPP82979 210 aaKnown RBP13.47□□□□□ -0.25
RPAIN-205ENST00000536255 GPS1Q13098 491 aa13.47□□□□□ -0.25
RPAIN-205ENST00000536255 OLIG2Q13516 323 aa13.47□□□□□ -0.25
RPAIN-205ENST00000536255 LAMB3Q13751 1172 aa13.47□□□□□ -0.25
RPAIN-205ENST00000536255 NFATC4Q14934 902 aa13.47□□□□□ -0.25
RPAIN-205ENST00000536255 TAF1AQ15573 450 aaPredicted RBP13.47□□□□□ -0.25
RPAIN-205ENST00000536255 TRIP13Q15645 432 aaPredicted RBP13.47□□□□□ -0.25
RPAIN-205ENST00000536255 SYDE1Q6ZW31 735 aaPredicted RBP13.47□□□□□ -0.25
RPAIN-205ENST00000536255 PHACTR4Q8IZ21 702 aa13.47□□□□□ -0.25
RPAIN-205ENST00000536255 OR4C6Q8NH72 309 aa13.47□□□□□ -0.25
RPAIN-205ENST00000536255 BTN2A2Q8WVV5 523 aa13.47□□□□□ -0.25
RPAIN-205ENST00000536255 ADAMTS14Q8WXS8 1223 aa13.47□□□□□ -0.25
RPAIN-205ENST00000536255 ZNF592Q92610 1267 aa13.47□□□□□ -0.25
RPAIN-205ENST00000536255 SLCO2A1Q92959 643 aa13.47□□□□□ -0.25
RPAIN-205ENST00000536255 SCNM1Q9BWG6 230 aa13.47□□□□□ -0.25
RPAIN-205ENST00000536255 NFKBIL1Q9UBC1 381 aaPredicted RBP13.47□□□□□ -0.25
RPAIN-205ENST00000536255 APOBEC3BQ9UH17 382 aaKnown RBP13.47□□□□□ -0.25
RPAIN-205ENST00000536255 CD84Q9UIB8 345 aa13.47□□□□□ -0.25
RPAIN-205ENST00000536255 PNMA8BQ9ULN7 279 aaPredicted RBP13.47□□□□□ -0.25
RPAIN-205ENST00000536255 LRRK1Q38SD2 2015 aa13.47□□□□□ -0.25
RPAIN-205ENST00000536255 SPEGQ15772 3267 aa13.47□□□□□ -0.25
RPAIN-205ENST00000536255 NEMP2A6NFY4 417 aa13.46□□□□□ -0.25
RPAIN-205ENST00000536255 SCAMP1O15126 338 aa13.46□□□□□ -0.25
RPAIN-205ENST00000536255 STX7O15400 261 aaKnown RBP13.46□□□□□ -0.25
RPAIN-205ENST00000536255 AQP9O43315 295 aa13.46□□□□□ -0.25
RPAIN-205ENST00000536255 SIGLEC6O43699 453 aa13.46□□□□□ -0.25
RPAIN-205ENST00000536255 GIMD1P0DJR0 217 aa13.46□□□□□ -0.25
RPAIN-205ENST00000536255 ALPPL2P10696 532 aa13.46□□□□□ -0.25
RPAIN-205ENST00000536255 MYCLP1P12525 358 aaPredicted RBP13.46□□□□□ -0.25
RPAIN-205ENST00000536255 SPINK2P20155 84 aa13.46□□□□□ -0.25
RPAIN-205ENST00000536255 TPSB2P20231 275 aa13.46□□□□□ -0.25
RPAIN-205ENST00000536255 LPOP22079 712 aaPredicted RBP13.46□□□□□ -0.25
RPAIN-205ENST00000536255 VPS41P49754 854 aa13.46□□□□□ -0.25
RPAIN-205ENST00000536255 BLKP51451 505 aa13.46□□□□□ -0.25
RPAIN-205ENST00000536255 KIAA1024LP59773 190 aa13.46□□□□□ -0.25
RPAIN-205ENST00000536255 PPARDQ03181 441 aa13.46□□□□□ -0.25
RPAIN-205ENST00000536255 CKAP4Q07065 602 aaKnown RBP13.46□□□□□ -0.25
RPAIN-205ENST00000536255 DNAJC3Q13217 504 aa13.46□□□□□ -0.25
RPAIN-205ENST00000536255 TUBB2AQ13885 445 aa13.46□□□□□ -0.25
RPAIN-205ENST00000536255 TPSAB1Q15661 275 aa13.46□□□□□ -0.25
RPAIN-205ENST00000536255 PROX2Q3B8N5 592 aa13.46□□□□□ -0.25
RPAIN-205ENST00000536255 HENMT1Q5T8I9 393 aaKnown RBP13.46□□□□□ -0.25
RPAIN-205ENST00000536255 PDPK2PQ6A1A2 396 aa13.46□□□□□ -0.25
RPAIN-205ENST00000536255 DENND5AQ6IQ26 1287 aa13.46□□□□□ -0.25
RPAIN-205ENST00000536255 KLHL7Q8IXQ5 586 aa13.46□□□□□ -0.25
RPAIN-205ENST00000536255 RBFAQ8N0V3 343 aa13.46□□□□□ -0.25
RPAIN-205ENST00000536255 TTC30BQ8N4P2 665 aa13.46□□□□□ -0.25
RPAIN-205ENST00000536255 CHCHD4Q8N4Q1 142 aa13.46□□□□□ -0.25
RPAIN-205ENST00000536255 SCAMP4Q969E2 229 aa13.46□□□□□ -0.25
RPAIN-205ENST00000536255 FUBP1Q96AE4 644 aaKnown RBP13.46□□□□□ -0.25
RPAIN-205ENST00000536255 EID2BQ96D98 161 aa13.46□□□□□ -0.25
RPAIN-205ENST00000536255 TBATAQ96M53 351 aa13.46□□□□□ -0.25
RPAIN-205ENST00000536255 WDR92Q96MX6 357 aa13.46□□□□□ -0.25
RPAIN-205ENST00000536255 PLEKHG4BQ96PX9 1271 aa13.46□□□□□ -0.25
RPAIN-205ENST00000536255 C19orf43Q9BQ61 176 aa13.46□□□□□ -0.25
RPAIN-205ENST00000536255 ZSCAN5AQ9BUG6 496 aa13.46□□□□□ -0.25
RPAIN-205ENST00000536255 TUBB2BQ9BVA1 445 aa13.46□□□□□ -0.25
RPAIN-205ENST00000536255 RIOK2Q9BVS4 552 aaKnown RBP13.46□□□□□ -0.25
RPAIN-205ENST00000536255 SPATA16Q9BXB7 569 aa13.46□□□□□ -0.25
RPAIN-205ENST00000536255 SLC13A1Q9BZW2 595 aa13.46□□□□□ -0.25
RPAIN-205ENST00000536255 TCEAL2Q9H3H9 227 aaPredicted RBP13.46□□□□□ -0.25
RPAIN-205ENST00000536255 NLGN3Q9NZ94 848 aa13.46□□□□□ -0.25
RPAIN-205ENST00000536255 CDC23Q9UJX2 597 aa13.46□□□□□ -0.25
RPAIN-205ENST00000536255 CSNK1G3Q9Y6M4 447 aa13.46□□□□□ -0.25
RPAIN-205ENST00000536255 K7ESM1 405 aa13.45□□□□□ -0.26
RPAIN-205ENST00000536255 AURKAO14965 403 aa13.45□□□□□ -0.26
RPAIN-205ENST00000536255 URI1O94763 535 aaPredicted RBP13.45□□□□□ -0.26
RPAIN-205ENST00000536255 BPIP17213 487 aa13.45□□□□□ -0.26
RPAIN-205ENST00000536255 CKMT2P17540 419 aa13.45□□□□□ -0.26
RPAIN-205ENST00000536255 SPAM1P38567 509 aa13.45□□□□□ -0.26
RPAIN-205ENST00000536255 HADHAP40939 763 aa13.45□□□□□ -0.26
RPAIN-205ENST00000536255 ACADVLP49748 655 aa13.45□□□□□ -0.26
RPAIN-205ENST00000536255 HK3P52790 923 aa13.45□□□□□ -0.26
RPAIN-205ENST00000536255 CDK3Q00526 305 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms