RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 CASRP41180 1078 aa12.89□□□□□ -0.35
TNFRSF1A-207ENST00000535958 CDC20Q12834 499 aa12.89□□□□□ -0.35
TNFRSF1A-207ENST00000535958 NFATC2Q13469 925 aa12.89□□□□□ -0.35
TNFRSF1A-207ENST00000535958 KRT81Q14533 505 aa12.89□□□□□ -0.35
TNFRSF1A-207ENST00000535958 STX1AQ16623 288 aa12.89□□□□□ -0.35
TNFRSF1A-207ENST00000535958 C16orf46Q6P387 395 aa12.89□□□□□ -0.35
TNFRSF1A-207ENST00000535958 SLC9B2Q86UD5 537 aa12.89□□□□□ -0.35
TNFRSF1A-207ENST00000535958 TRIM74Q86UV6 250 aa12.89□□□□□ -0.35
TNFRSF1A-207ENST00000535958 AVL9Q8NBF6 648 aa12.89□□□□□ -0.35
TNFRSF1A-207ENST00000535958 EXD1Q8NHP7 514 aa12.89□□□□□ -0.35
TNFRSF1A-207ENST00000535958 PTCD2Q8WV60 388 aaKnown RBP12.89□□□□□ -0.35
TNFRSF1A-207ENST00000535958 APOBEC4Q8WW27 367 aaKnown RBP12.89□□□□□ -0.35
TNFRSF1A-207ENST00000535958 NCSTNQ92542 709 aa12.89□□□□□ -0.35
TNFRSF1A-207ENST00000535958 MCCC1Q96RQ3 725 aaPredicted RBP12.89□□□□□ -0.35
TNFRSF1A-207ENST00000535958 CTRCQ99895 268 aa12.89□□□□□ -0.35
TNFRSF1A-207ENST00000535958 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.89□□□□□ -0.35
TNFRSF1A-207ENST00000535958 POLR1EQ9GZS1 481 aaKnown RBP12.89□□□□□ -0.35
TNFRSF1A-207ENST00000535958 ABCG8Q9H221 673 aa12.89□□□□□ -0.35
TNFRSF1A-207ENST00000535958 NT5MQ9NPB1 228 aa12.89□□□□□ -0.35
TNFRSF1A-207ENST00000535958 ZNF71Q9NQZ8 489 aaPredicted RBP12.89□□□□□ -0.35
TNFRSF1A-207ENST00000535958 ANKMY1Q9P2S6 941 aa12.89□□□□□ -0.35
TNFRSF1A-207ENST00000535958 KLHL3Q9UH77 587 aa12.89□□□□□ -0.35
TNFRSF1A-207ENST00000535958 ZNHIT2Q9UHR6 403 aa12.89□□□□□ -0.35
TNFRSF1A-207ENST00000535958 MYO6Q9UM54 1294 aa12.89□□□□□ -0.35
TNFRSF1A-207ENST00000535958 PLEKHM1Q9Y4G2 1056 aa12.89□□□□□ -0.35
TNFRSF1A-207ENST00000535958 ZFC3H1O60293 1989 aaKnown RBP12.89□□□□□ -0.35
TNFRSF1A-207ENST00000535958 POLR1CO15160 346 aaPredicted RBP12.88□□□□□ -0.35
TNFRSF1A-207ENST00000535958 INPP4BO15327 924 aa12.88□□□□□ -0.35
TNFRSF1A-207ENST00000535958 MAFKO60675 156 aa12.88□□□□□ -0.35
TNFRSF1A-207ENST00000535958 MYBL1P10243 752 aa12.88□□□□□ -0.35
TNFRSF1A-207ENST00000535958 TCN2P20062 427 aa12.88□□□□□ -0.35
TNFRSF1A-207ENST00000535958 AMPD1P23109 780 aa12.88□□□□□ -0.35
TNFRSF1A-207ENST00000535958 PCK1P35558 622 aa12.88□□□□□ -0.35
TNFRSF1A-207ENST00000535958 ARSDP51689 593 aa12.88□□□□□ -0.35
TNFRSF1A-207ENST00000535958 SRSF1Q07955 248 aaKnown RBP eCLIP12.88□□□□□ -0.35
TNFRSF1A-207ENST00000535958 UBAP2LQ14157 1087 aaKnown RBP12.88□□□□□ -0.35
TNFRSF1A-207ENST00000535958 NCAPHQ15003 741 aa12.88□□□□□ -0.35
TNFRSF1A-207ENST00000535958 DPYSL2Q16555 572 aa12.88□□□□□ -0.35
TNFRSF1A-207ENST00000535958 PYCR3Q53H96 274 aa12.88□□□□□ -0.35
TNFRSF1A-207ENST00000535958 BOLA3Q53S33 107 aa12.88□□□□□ -0.35
TNFRSF1A-207ENST00000535958 WDR74Q6RFH5 385 aaPredicted RBP12.88□□□□□ -0.35
TNFRSF1A-207ENST00000535958 ZNF765Q7L2R6 523 aa12.88□□□□□ -0.35
TNFRSF1A-207ENST00000535958 CHST15Q7LFX5 561 aaPredicted RBP12.88□□□□□ -0.35
TNFRSF1A-207ENST00000535958 TP53INP2Q8IXH6 220 aa12.88□□□□□ -0.35
TNFRSF1A-207ENST00000535958 PGBD5Q8N414 524 aa12.88□□□□□ -0.35
TNFRSF1A-207ENST00000535958 SFRP1Q8N474 314 aa12.88□□□□□ -0.35
TNFRSF1A-207ENST00000535958 ARFGAP1Q8N6T3 406 aa12.88□□□□□ -0.35
TNFRSF1A-207ENST00000535958 STARD8Q92502 1023 aa12.88□□□□□ -0.35
TNFRSF1A-207ENST00000535958 RTP4Q96DX8 246 aa12.88□□□□□ -0.35
TNFRSF1A-207ENST00000535958 NSMCE3Q96MG7 304 aa12.88□□□□□ -0.35
TNFRSF1A-207ENST00000535958 HERPUD2Q9BSE4 406 aa12.88□□□□□ -0.35
TNFRSF1A-207ENST00000535958 PILRAQ9UKJ1 303 aa12.88□□□□□ -0.35
TNFRSF1A-207ENST00000535958 PCDHB3Q9Y5E6 796 aa12.88□□□□□ -0.35
TNFRSF1A-207ENST00000535958 LRRC53A6NM62 1247 aa12.87□□□□□ -0.35
TNFRSF1A-207ENST00000535958 NKX2-8O15522 239 aa12.87□□□□□ -0.35
TNFRSF1A-207ENST00000535958 SNX2O60749 519 aa12.87□□□□□ -0.35
TNFRSF1A-207ENST00000535958 STK17BO94768 372 aa12.87□□□□□ -0.35
TNFRSF1A-207ENST00000535958 FTLP02792 175 aaPredicted RBP12.87□□□□□ -0.35
TNFRSF1A-207ENST00000535958 EPHA4P54764 986 aa12.87□□□□□ -0.35
TNFRSF1A-207ENST00000535958 MC2RQ01718 297 aa12.87□□□□□ -0.35
TNFRSF1A-207ENST00000535958 ABHD18Q0P651 414 aa12.87□□□□□ -0.35
TNFRSF1A-207ENST00000535958 DEFB109BQ30KR1 87 aa12.87□□□□□ -0.35
TNFRSF1A-207ENST00000535958 LACTB2Q53H82 288 aaPredicted RBP12.87□□□□□ -0.35
TNFRSF1A-207ENST00000535958 IRF2BP2Q7Z5L9 587 aa12.87□□□□□ -0.35
TNFRSF1A-207ENST00000535958 POLNQ7Z5Q5 900 aa12.87□□□□□ -0.35
TNFRSF1A-207ENST00000535958 TECPR1Q7Z6L1 1165 aa12.87□□□□□ -0.35
TNFRSF1A-207ENST00000535958 ATCAYQ86WG3 371 aa12.87□□□□□ -0.35
TNFRSF1A-207ENST00000535958 PHYKPLQ8IUZ5 450 aa12.87□□□□□ -0.35
TNFRSF1A-207ENST00000535958 UNC5BQ8IZJ1 945 aa12.87□□□□□ -0.35
TNFRSF1A-207ENST00000535958 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.87□□□□□ -0.35
TNFRSF1A-207ENST00000535958 ESX1Q8N693 406 aa12.87□□□□□ -0.35
TNFRSF1A-207ENST00000535958 SCAMP4Q969E2 229 aa12.87□□□□□ -0.35
TNFRSF1A-207ENST00000535958 SCARF2Q96GP6 870 aaPredicted RBP12.87□□□□□ -0.35
TNFRSF1A-207ENST00000535958 CSPG4P5Q96PW8 444 aa12.87□□□□□ -0.35
TNFRSF1A-207ENST00000535958 TRIM7Q9C029 511 aa12.87□□□□□ -0.35
TNFRSF1A-207ENST00000535958 EPB41L1Q9H4G0 881 aa12.87□□□□□ -0.35
TNFRSF1A-207ENST00000535958 HAUS4Q9H6D7 363 aa12.87□□□□□ -0.35
TNFRSF1A-207ENST00000535958 SARS2Q9NP81 518 aaKnown RBP12.87□□□□□ -0.35
TNFRSF1A-207ENST00000535958 VPS18Q9P253 973 aa12.87□□□□□ -0.35
TNFRSF1A-207ENST00000535958 ST14Q9Y5Y6 855 aa12.87□□□□□ -0.35
TNFRSF1A-207ENST00000535958 DOPEY2Q9Y3R5 2298 aa12.86□□□□□ -0.35
TNFRSF1A-207ENST00000535958 A0A0J9YYE9 177 aa12.86□□□□□ -0.35
TNFRSF1A-207ENST00000535958 LOC101059948A0A1B0GTJ6 334 aa12.86□□□□□ -0.35
TNFRSF1A-207ENST00000535958 PEX11BO96011 259 aa12.86□□□□□ -0.35
TNFRSF1A-207ENST00000535958 SOD1P00441 154 aa12.86□□□□□ -0.35
TNFRSF1A-207ENST00000535958 TRBC1P01850 177 aa12.86□□□□□ -0.35
TNFRSF1A-207ENST00000535958 GZMAP12544 262 aa12.86□□□□□ -0.35
TNFRSF1A-207ENST00000535958 ACP5P13686 325 aa12.86□□□□□ -0.35
TNFRSF1A-207ENST00000535958 SSR1P43307 286 aaKnown RBP12.86□□□□□ -0.35
TNFRSF1A-207ENST00000535958 FOXK1P85037 733 aa12.86□□□□□ -0.35
TNFRSF1A-207ENST00000535958 FOXM1Q08050 763 aa12.86□□□□□ -0.35
TNFRSF1A-207ENST00000535958 PTPRRQ15256 657 aa12.86□□□□□ -0.35
TNFRSF1A-207ENST00000535958 FILIP1LQ4L180 1135 aa12.86□□□□□ -0.35
TNFRSF1A-207ENST00000535958 CCDC122Q5T0U0 273 aa12.86□□□□□ -0.35
TNFRSF1A-207ENST00000535958 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.86□□□□□ -0.35
TNFRSF1A-207ENST00000535958 TIGD7Q6NT04 549 aaPredicted RBP12.86□□□□□ -0.35
TNFRSF1A-207ENST00000535958 CYP4V2Q6ZWL3 525 aaPredicted RBP12.86□□□□□ -0.35
TNFRSF1A-207ENST00000535958 NLRP8Q86W28 1048 aa12.86□□□□□ -0.35
TNFRSF1A-207ENST00000535958 PLXDC1Q8IUK5 500 aa12.86□□□□□ -0.35
TNFRSF1A-207ENST00000535958 LRRC49Q8IUZ0 686 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms