RNA–Protein interactions for RNA: ENST00000535789.1

ATL3-202, Transcript of atlastin GTPase 3, humanhuman

TSL 4

Gene ATL3, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-202ENST00000535789 SPINT3P49223 89 aa16.31■□□□□ 0.2
ATL3-202ENST00000535789 CYP4F3Q08477 520 aa16.31■□□□□ 0.2
ATL3-202ENST00000535789 CACTIN-AS1Q8N1I8 211 aa16.31■□□□□ 0.2
ATL3-202ENST00000535789 ARL10Q8N8L6 244 aa16.31■□□□□ 0.2
ATL3-202ENST00000535789 GPR156Q8NFN8 814 aa16.31■□□□□ 0.2
ATL3-202ENST00000535789 ATL2Q8NHH9 583 aa16.31■□□□□ 0.2
ATL3-202ENST00000535789 ACTL9Q8TC94 416 aa16.31■□□□□ 0.2
ATL3-202ENST00000535789 P3H4Q92791 437 aa16.31■□□□□ 0.2
ATL3-202ENST00000535789 SCARF2Q96GP6 870 aaPredicted RBP16.31■□□□□ 0.2
ATL3-202ENST00000535789 MLPHQ9BV36 600 aaPredicted RBP16.31■□□□□ 0.2
ATL3-202ENST00000535789 CCDC86Q9H6F5 360 aaKnown RBP16.31■□□□□ 0.2
ATL3-202ENST00000535789 SUDS3Q9H7L9 328 aaPredicted RBP16.31■□□□□ 0.2
ATL3-202ENST00000535789 CARS2Q9HA77 564 aaKnown RBP16.31■□□□□ 0.2
ATL3-202ENST00000535789 ZNF711Q9Y462 761 aa16.31■□□□□ 0.2
ATL3-202ENST00000535789 ZNF500O60304 480 aaPredicted RBP16.3■□□□□ 0.2
ATL3-202ENST00000535789 PMPCBO75439 489 aa16.3■□□□□ 0.2
ATL3-202ENST00000535789 FTCDO95954 541 aa16.3■□□□□ 0.2
ATL3-202ENST00000535789 PYGMP11217 842 aa16.3■□□□□ 0.2
ATL3-202ENST00000535789 KELP23276 732 aa16.3■□□□□ 0.2
ATL3-202ENST00000535789 AK4P27144 223 aaPredicted RBP16.3■□□□□ 0.2
ATL3-202ENST00000535789 RBL1P28749 1068 aa16.3■□□□□ 0.2
ATL3-202ENST00000535789 CHRNA4P43681 627 aa16.3■□□□□ 0.2
ATL3-202ENST00000535789 DUSP3P51452 185 aaPredicted RBP16.3■□□□□ 0.2
ATL3-202ENST00000535789 E2F1Q01094 437 aa16.3■□□□□ 0.2
ATL3-202ENST00000535789 OTUD4Q01804 1114 aaKnown RBP16.3■□□□□ 0.2
ATL3-202ENST00000535789 CDK18Q07002 472 aa16.3■□□□□ 0.2
ATL3-202ENST00000535789 DOK6Q6PKX4 331 aa16.3■□□□□ 0.2
ATL3-202ENST00000535789 LVRNQ6Q4G3 990 aa16.3■□□□□ 0.2
ATL3-202ENST00000535789 GKN2Q86XP6 184 aa16.3■□□□□ 0.2
ATL3-202ENST00000535789 RNF10Q8N5U6 811 aaKnown RBP16.3■□□□□ 0.2
ATL3-202ENST00000535789 PDCD7Q8N8D1 485 aaKnown RBP16.3■□□□□ 0.2
ATL3-202ENST00000535789 GPBAR1Q8TDU6 330 aa16.3■□□□□ 0.2
ATL3-202ENST00000535789 HTR3CQ8WXA8 447 aa16.3■□□□□ 0.2
ATL3-202ENST00000535789 MRGPRX2Q96LB1 330 aa16.3■□□□□ 0.2
ATL3-202ENST00000535789 OSBPL8Q9BZF1 889 aa16.3■□□□□ 0.2
ATL3-202ENST00000535789 HAUS2Q9NVX0 235 aa16.3■□□□□ 0.2
ATL3-202ENST00000535789 KCTD5Q9NXV2 234 aa16.3■□□□□ 0.2
ATL3-202ENST00000535789 MOSPD1Q9UJG1 213 aa16.3■□□□□ 0.2
ATL3-202ENST00000535789 PADI4Q9UM07 663 aa16.3■□□□□ 0.2
ATL3-202ENST00000535789 GPR34Q9UPC5 381 aa16.3■□□□□ 0.2
ATL3-202ENST00000535789 SHOC2Q9UQ13 582 aa16.3■□□□□ 0.2
ATL3-202ENST00000535789 TMEM98Q9Y2Y6 226 aa16.3■□□□□ 0.2
ATL3-202ENST00000535789 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.3■□□□□ 0.2
ATL3-202ENST00000535789 CCDC66A2RUB6 948 aa16.29■□□□□ 0.2
ATL3-202ENST00000535789 PMS2P1A4D2B8 440 aa16.29■□□□□ 0.2
ATL3-202ENST00000535789 INPP4BO15327 924 aa16.29■□□□□ 0.2
ATL3-202ENST00000535789 GNPDA1P46926 289 aa16.29■□□□□ 0.2
ATL3-202ENST00000535789 COPS2P61201 443 aa16.29■□□□□ 0.2
ATL3-202ENST00000535789 OGFOD3Q6PK18 319 aa16.29■□□□□ 0.2
ATL3-202ENST00000535789 NLRP8Q86W28 1048 aa16.29■□□□□ 0.2
ATL3-202ENST00000535789 NRSN1Q8IZ57 195 aa16.29■□□□□ 0.2
ATL3-202ENST00000535789 NDUFAF2Q8N183 169 aa16.29■□□□□ 0.2
ATL3-202ENST00000535789 GPR26Q8NDV2 337 aa16.29■□□□□ 0.2
ATL3-202ENST00000535789 MAPK15Q8TD08 544 aa16.29■□□□□ 0.2
ATL3-202ENST00000535789 CCDC74AQ96AQ1 378 aa16.29■□□□□ 0.2
ATL3-202ENST00000535789 CCDC3Q9BQI4 270 aa16.29■□□□□ 0.2
ATL3-202ENST00000535789 SPATS2LQ9NUQ6 558 aaKnown RBP16.29■□□□□ 0.2
ATL3-202ENST00000535789 GULP1Q9UBP9 304 aa16.29■□□□□ 0.2
ATL3-202ENST00000535789 DNPEPQ9ULA0 475 aa16.29■□□□□ 0.2
ATL3-202ENST00000535789 RAXQ9Y2V3 346 aa16.29■□□□□ 0.2
ATL3-202ENST00000535789 PIKFYVEQ9Y2I7 2098 aa16.29■□□□□ 0.2
ATL3-202ENST00000535789 LOC285095A0A1B0GVY8 99 aa16.28■□□□□ 0.2
ATL3-202ENST00000535789 A0A1W2PQM1 296 aa16.28■□□□□ 0.2
ATL3-202ENST00000535789 HACD1B0YJ81 288 aa16.28■□□□□ 0.2
ATL3-202ENST00000535789 B4DGG1 531 aa16.28■□□□□ 0.2
ATL3-202ENST00000535789 NTN3O00634 580 aaPredicted RBP16.28■□□□□ 0.2
ATL3-202ENST00000535789 TLX3O43711 291 aaPredicted RBP16.28■□□□□ 0.2
ATL3-202ENST00000535789 DNAJC6O75061 913 aa16.28■□□□□ 0.2
ATL3-202ENST00000535789 CSO75390 466 aaKnown RBP16.28■□□□□ 0.2
ATL3-202ENST00000535789 NDST3O95803 873 aa16.28■□□□□ 0.2
ATL3-202ENST00000535789 SLC4A1P02730 911 aa16.28■□□□□ 0.2
ATL3-202ENST00000535789 ATP1A1P05023 1023 aaKnown RBP16.28■□□□□ 0.2
ATL3-202ENST00000535789 IVLP07476 585 aa16.28■□□□□ 0.2
ATL3-202ENST00000535789 ADCY8P40145 1251 aa16.28■□□□□ 0.2
ATL3-202ENST00000535789 NAP1L1P55209 391 aaKnown RBP16.28■□□□□ 0.2
ATL3-202ENST00000535789 RWDD2BP57060 319 aa16.28■□□□□ 0.2
ATL3-202ENST00000535789 XRCC4Q13426 336 aa16.28■□□□□ 0.2
ATL3-202ENST00000535789 OLIG2Q13516 323 aa16.28■□□□□ 0.2
ATL3-202ENST00000535789 HLTFQ14527 1009 aaKnown RBP eCLIP16.28■□□□□ 0.2
ATL3-202ENST00000535789 RTP5Q14D33 572 aa16.28■□□□□ 0.2
ATL3-202ENST00000535789 BZW1Q7L1Q6 419 aaKnown RBP16.28■□□□□ 0.2
ATL3-202ENST00000535789 TMC3Q7Z5M5 1100 aa16.28■□□□□ 0.2
ATL3-202ENST00000535789 TAF8Q7Z7C8 310 aa16.28■□□□□ 0.2
ATL3-202ENST00000535789 C17orf82Q86X59 251 aaPredicted RBP16.28■□□□□ 0.2
ATL3-202ENST00000535789 RAVER1Q8IY67 606 aaKnown RBP16.28■□□□□ 0.2
ATL3-202ENST00000535789 SDR16C5Q8N3Y7 309 aa16.28■□□□□ 0.2
ATL3-202ENST00000535789 PATE1Q8WXA2 126 aa16.28■□□□□ 0.2
ATL3-202ENST00000535789 NXPE2Q96DL1 559 aa16.28■□□□□ 0.2
ATL3-202ENST00000535789 CALR3Q96L12 384 aaKnown RBP16.28■□□□□ 0.2
ATL3-202ENST00000535789 FCRL5Q96RD9 977 aa16.28■□□□□ 0.2
ATL3-202ENST00000535789 ADGRE3Q9BY15 652 aa16.28■□□□□ 0.2
ATL3-202ENST00000535789 NCKIPSDQ9NZQ3 722 aa16.28■□□□□ 0.2
ATL3-202ENST00000535789 KLHL8Q9P2G9 620 aaPredicted RBP16.28■□□□□ 0.2
ATL3-202ENST00000535789 NFKBIL1Q9UBC1 381 aaPredicted RBP16.28■□□□□ 0.2
ATL3-202ENST00000535789 DOLKQ9UPQ8 538 aa16.28■□□□□ 0.2
ATL3-202ENST00000535789 EFR3BQ9Y2G0 817 aa16.28■□□□□ 0.2
ATL3-202ENST00000535789 FAM208BQ5VWN6 2430 aa16.28■□□□□ 0.2
ATL3-202ENST00000535789 PTPRQQ9UMZ3 2332 aa16.28■□□□□ 0.2
ATL3-202ENST00000535789 TCRBV7S2A1N4TA0A589 114 aa16.27■□□□□ 0.2
ATL3-202ENST00000535789 CA5AP35218 305 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms