RNA–Protein interactions for RNA: ENST00000535717.1

CHD4-203, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-203ENST00000535717 MACC1Q6ZN28 852 aa12□□□□□ -0.49
CHD4-203ENST00000535717 CAND1Q86VP6 1230 aaKnown RBP12□□□□□ -0.49
CHD4-203ENST00000535717 HEATR4Q86WZ0 1026 aa12□□□□□ -0.49
CHD4-203ENST00000535717 NAT8LQ8N9F0 302 aa12□□□□□ -0.49
CHD4-203ENST00000535717 OR13C4Q8NGS5 318 aa12□□□□□ -0.49
CHD4-203ENST00000535717 PLEKHG4BQ96PX9 1271 aa12□□□□□ -0.49
CHD4-203ENST00000535717 ELF4Q99607 663 aaPredicted RBP12□□□□□ -0.49
CHD4-203ENST00000535717 SPATA16Q9BXB7 569 aa12□□□□□ -0.49
CHD4-203ENST00000535717 CNOT6Q9ULM6 557 aaKnown RBP12□□□□□ -0.49
CHD4-203ENST00000535717 PNMA8BQ9ULN7 279 aaPredicted RBP12□□□□□ -0.49
CHD4-203ENST00000535717 FNDC3AQ9Y2H6 1198 aaKnown RBP12□□□□□ -0.49
CHD4-203ENST00000535717 CABIN1Q9Y6J0 2220 aa11.99□□□□□ -0.49
CHD4-203ENST00000535717 TMEM202A6NGA9 273 aa11.99□□□□□ -0.49
CHD4-203ENST00000535717 MROH6A6NGR9 719 aa11.99□□□□□ -0.49
CHD4-203ENST00000535717 GOLGA8MH3BSY2 632 aa11.99□□□□□ -0.49
CHD4-203ENST00000535717 CACNB4O00305 520 aaPredicted RBP11.99□□□□□ -0.49
CHD4-203ENST00000535717 GAPDHSO14556 408 aaPredicted RBP11.99□□□□□ -0.49
CHD4-203ENST00000535717 DNALI1O14645 258 aaPredicted RBP11.99□□□□□ -0.49
CHD4-203ENST00000535717 INPP4BO15327 924 aa11.99□□□□□ -0.49
CHD4-203ENST00000535717 RAD51CO43502 376 aa11.99□□□□□ -0.49
CHD4-203ENST00000535717 PPFIA2O75334 1257 aa11.99□□□□□ -0.49
CHD4-203ENST00000535717 AVILO75366 819 aa11.99□□□□□ -0.49
CHD4-203ENST00000535717 PYGLP06737 847 aa11.99□□□□□ -0.49
CHD4-203ENST00000535717 MYCLP1P12525 358 aaPredicted RBP11.99□□□□□ -0.49
CHD4-203ENST00000535717 SPAM1P38567 509 aa11.99□□□□□ -0.49
CHD4-203ENST00000535717 NPY2RP49146 381 aa11.99□□□□□ -0.49
CHD4-203ENST00000535717 TMPRSS15P98073 1019 aa11.99□□□□□ -0.49
CHD4-203ENST00000535717 CDK3Q00526 305 aa11.99□□□□□ -0.49
CHD4-203ENST00000535717 PDE1BQ01064 536 aa11.99□□□□□ -0.49
CHD4-203ENST00000535717 EIF2B5Q13144 721 aaKnown RBP11.99□□□□□ -0.49
CHD4-203ENST00000535717 SHBQ15464 509 aa11.99□□□□□ -0.49
CHD4-203ENST00000535717 ZNF542PQ5EBM4 170 aa11.99□□□□□ -0.49
CHD4-203ENST00000535717 STPG1Q5TH74 334 aa11.99□□□□□ -0.49
CHD4-203ENST00000535717 IZUMO3Q5VZ72 239 aa11.99□□□□□ -0.49
CHD4-203ENST00000535717 ZDHHC20Q5W0Z9 365 aa11.99□□□□□ -0.49
CHD4-203ENST00000535717 KCTD16Q68DU8 428 aa11.99□□□□□ -0.49
CHD4-203ENST00000535717 MAATS1Q7Z4T9 603 aa11.99□□□□□ -0.49
CHD4-203ENST00000535717 TRIM74Q86UV6 250 aa11.99□□□□□ -0.49
CHD4-203ENST00000535717 PARGQ86W56 976 aa11.99□□□□□ -0.49
CHD4-203ENST00000535717 PPIL6Q8IXY8 311 aa11.99□□□□□ -0.49
CHD4-203ENST00000535717 TRAM1L1Q8N609 369 aa11.99□□□□□ -0.49
CHD4-203ENST00000535717 MCUQ8NE86 351 aa11.99□□□□□ -0.49
CHD4-203ENST00000535717 COX14Q96I36 57 aa11.99□□□□□ -0.49
CHD4-203ENST00000535717 HIC2Q96JB3 615 aa11.99□□□□□ -0.49
CHD4-203ENST00000535717 WDR92Q96MX6 357 aa11.99□□□□□ -0.49
CHD4-203ENST00000535717 RANBP9Q96S59 729 aa11.99□□□□□ -0.49
CHD4-203ENST00000535717 ZSCAN5AQ9BUG6 496 aa11.99□□□□□ -0.49
CHD4-203ENST00000535717 TMEM9BQ9NQ34 198 aa11.99□□□□□ -0.49
CHD4-203ENST00000535717 PHPT1Q9NRX4 125 aaPredicted RBP11.99□□□□□ -0.49
CHD4-203ENST00000535717 DNAAF2Q9NVR5 837 aaKnown RBP11.99□□□□□ -0.49
CHD4-203ENST00000535717 NLE1Q9NVX2 485 aaPredicted RBP11.99□□□□□ -0.49
CHD4-203ENST00000535717 KLF15Q9UIH9 416 aa11.99□□□□□ -0.49
CHD4-203ENST00000535717 FKBPLQ9UIM3 349 aa11.99□□□□□ -0.49
CHD4-203ENST00000535717 TMPRSS11EQ9UL52 423 aa11.99□□□□□ -0.49
CHD4-203ENST00000535717 GLYATL1P3A0A0U1RQE8 302 aa11.98□□□□□ -0.49
CHD4-203ENST00000535717 A0A1B0GTQ1 180 aa11.98□□□□□ -0.49
CHD4-203ENST00000535717 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.98□□□□□ -0.49
CHD4-203ENST00000535717 CCDC78A2IDD5 438 aa11.98□□□□□ -0.49
CHD4-203ENST00000535717 HEATR9A2RTY3 570 aa11.98□□□□□ -0.49
CHD4-203ENST00000535717 FAM187AA6NFU0 413 aa11.98□□□□□ -0.49
CHD4-203ENST00000535717 C4orf47A7E2U8 309 aa11.98□□□□□ -0.49
CHD4-203ENST00000535717 AP3B1O00203 1094 aa11.98□□□□□ -0.49
CHD4-203ENST00000535717 CCL22O00626 93 aa11.98□□□□□ -0.49
CHD4-203ENST00000535717 DFNA5O60443 496 aa11.98□□□□□ -0.49
CHD4-203ENST00000535717 CSF2P04141 144 aa11.98□□□□□ -0.49
CHD4-203ENST00000535717 MLNP12872 115 aa11.98□□□□□ -0.49
CHD4-203ENST00000535717 NME1P15531 152 aaKnown RBP11.98□□□□□ -0.49
CHD4-203ENST00000535717 ADRA1DP25100 572 aa11.98□□□□□ -0.49
CHD4-203ENST00000535717 PSMA3P25788 255 aa11.98□□□□□ -0.49
CHD4-203ENST00000535717 MGAT1P26572 445 aa11.98□□□□□ -0.49
CHD4-203ENST00000535717 HTR1BP28222 390 aa11.98□□□□□ -0.49
CHD4-203ENST00000535717 RXRGP48443 463 aa11.98□□□□□ -0.49
CHD4-203ENST00000535717 CRADDP78560 199 aa11.98□□□□□ -0.49
CHD4-203ENST00000535717 SARNPP82979 210 aaKnown RBP11.98□□□□□ -0.49
CHD4-203ENST00000535717 XIAPP98170 497 aa11.98□□□□□ -0.49
CHD4-203ENST00000535717 IL9RQ01113 521 aa11.98□□□□□ -0.49
CHD4-203ENST00000535717 CHRNA6Q15825 494 aa11.98□□□□□ -0.49
CHD4-203ENST00000535717 ALG11Q2TAA5 492 aa11.98□□□□□ -0.49
CHD4-203ENST00000535717 ATP13A5Q4VNC0 1218 aa11.98□□□□□ -0.49
CHD4-203ENST00000535717 PDPK2PQ6A1A2 396 aa11.98□□□□□ -0.49
CHD4-203ENST00000535717 ENPP7Q6UWV6 458 aa11.98□□□□□ -0.49
CHD4-203ENST00000535717 FAM151BQ6UXP7 276 aa11.98□□□□□ -0.49
CHD4-203ENST00000535717 MICALCLQ6ZW33 695 aa11.98□□□□□ -0.49
CHD4-203ENST00000535717 PCGF5Q86SE9 256 aa11.98□□□□□ -0.49
CHD4-203ENST00000535717 OXR1Q8N573 874 aa11.98□□□□□ -0.49
CHD4-203ENST00000535717 DTX3LQ8TDB6 740 aa11.98□□□□□ -0.49
CHD4-203ENST00000535717 STYXQ8WUJ0 223 aa11.98□□□□□ -0.49
CHD4-203ENST00000535717 OR1E3Q8WZA6 343 aa11.98□□□□□ -0.49
CHD4-203ENST00000535717 TSACCQ96A04 125 aaPredicted RBP11.98□□□□□ -0.49
CHD4-203ENST00000535717 DNAJC1Q96KC8 554 aaKnown RBP11.98□□□□□ -0.49
CHD4-203ENST00000535717 ZNF778Q96MU6 729 aa11.98□□□□□ -0.49
CHD4-203ENST00000535717 SERPINB12Q96P63 405 aa11.98□□□□□ -0.49
CHD4-203ENST00000535717 C19orf43Q9BQ61 176 aa11.98□□□□□ -0.49
CHD4-203ENST00000535717 ERP44Q9BS26 406 aa11.98□□□□□ -0.49
CHD4-203ENST00000535717 FRMD8Q9BZ67 464 aaPredicted RBP11.98□□□□□ -0.49
CHD4-203ENST00000535717 TRIM31Q9BZY9 425 aa11.98□□□□□ -0.49
CHD4-203ENST00000535717 FGF22Q9HCT0 170 aa11.98□□□□□ -0.49
CHD4-203ENST00000535717 DNAJC28Q9NX36 388 aa11.98□□□□□ -0.49
CHD4-203ENST00000535717 BFARQ9NZS9 450 aa11.98□□□□□ -0.49
CHD4-203ENST00000535717 TMEM98Q9Y2Y6 226 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms