RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 NTN3O00634 580 aaPredicted RBP10.38□□□□□ -0.75
CAPN1-225ENST00000533704 PMPCBO75439 489 aa10.38□□□□□ -0.75
CAPN1-225ENST00000533704 TNFSF15O95150 251 aa10.38□□□□□ -0.75
CAPN1-225ENST00000533704 IPO7O95373 1038 aaKnown RBP10.38□□□□□ -0.75
CAPN1-225ENST00000533704 ECEL1O95672 775 aa10.38□□□□□ -0.75
CAPN1-225ENST00000533704 MT-CYBP00156 380 aaPredicted RBP10.38□□□□□ -0.75
CAPN1-225ENST00000533704 ATP1A1P05023 1023 aaKnown RBP10.38□□□□□ -0.75
CAPN1-225ENST00000533704 PYGLP06737 847 aa10.38□□□□□ -0.75
CAPN1-225ENST00000533704 IVLP07476 585 aa10.38□□□□□ -0.75
CAPN1-225ENST00000533704 HOXB3P14651 431 aaPredicted RBP10.38□□□□□ -0.75
CAPN1-225ENST00000533704 GLB1P16278 677 aa10.38□□□□□ -0.75
CAPN1-225ENST00000533704 PECAM1P16284 738 aaPredicted RBP10.38□□□□□ -0.75
CAPN1-225ENST00000533704 TEAD1P28347 426 aa10.38□□□□□ -0.75
CAPN1-225ENST00000533704 CDKN2BP42772 138 aa10.38□□□□□ -0.75
CAPN1-225ENST00000533704 MARCKSL1P49006 195 aa10.38□□□□□ -0.75
CAPN1-225ENST00000533704 PDX1P52945 283 aa10.38□□□□□ -0.75
CAPN1-225ENST00000533704 INHBCP55103 352 aa10.38□□□□□ -0.75
CAPN1-225ENST00000533704 HLTFQ14527 1009 aaKnown RBP eCLIP10.38□□□□□ -0.75
CAPN1-225ENST00000533704 TCEAL1Q15170 157 aa10.38□□□□□ -0.75
CAPN1-225ENST00000533704 AMZ1Q400G9 498 aa10.38□□□□□ -0.75
CAPN1-225ENST00000533704 MAP9Q49MG5 647 aa10.38□□□□□ -0.75
CAPN1-225ENST00000533704 CCDC70Q6NSX1 233 aa10.38□□□□□ -0.75
CAPN1-225ENST00000533704 OGFOD3Q6PK18 319 aa10.38□□□□□ -0.75
CAPN1-225ENST00000533704 SPRED1Q7Z699 444 aa10.38□□□□□ -0.75
CAPN1-225ENST00000533704 DAAM2Q86T65 1068 aa10.38□□□□□ -0.75
CAPN1-225ENST00000533704 ZC3H18Q86VM9 953 aaKnown RBP10.38□□□□□ -0.75
CAPN1-225ENST00000533704 JAMLQ86YT9 394 aa10.38□□□□□ -0.75
CAPN1-225ENST00000533704 GALNT13Q8IUC8 556 aa10.38□□□□□ -0.75
CAPN1-225ENST00000533704 SPACA3Q8IXA5 215 aa10.38□□□□□ -0.75
CAPN1-225ENST00000533704 CCDC170Q8IYT3 715 aa10.38□□□□□ -0.75
CAPN1-225ENST00000533704 FBXO39Q8N4B4 442 aa10.38□□□□□ -0.75
CAPN1-225ENST00000533704 ZNF248Q8NDW4 579 aa10.38□□□□□ -0.75
CAPN1-225ENST00000533704 EXD1Q8NHP7 514 aa10.38□□□□□ -0.75
CAPN1-225ENST00000533704 SPATA22Q8NHS9 363 aa10.38□□□□□ -0.75
CAPN1-225ENST00000533704 TFB1MQ8WVM0 346 aaKnown RBP10.38□□□□□ -0.75
CAPN1-225ENST00000533704 KCNE4Q8WWG9 221 aa10.38□□□□□ -0.75
CAPN1-225ENST00000533704 PATE1Q8WXA2 126 aa10.38□□□□□ -0.75
CAPN1-225ENST00000533704 GRAMD1AQ96CP6 724 aa10.38□□□□□ -0.75
CAPN1-225ENST00000533704 IMP4Q96G21 291 aaKnown RBP10.38□□□□□ -0.75
CAPN1-225ENST00000533704 HEMGNQ9BXL5 484 aa10.38□□□□□ -0.75
CAPN1-225ENST00000533704 ZMYND15Q9H091 742 aa10.38□□□□□ -0.75
CAPN1-225ENST00000533704 CDH19Q9H159 772 aa10.38□□□□□ -0.75
CAPN1-225ENST00000533704 SLC25A51Q9H1U9 297 aa10.38□□□□□ -0.75
CAPN1-225ENST00000533704 FAM83DQ9H4H8 585 aa10.38□□□□□ -0.75
CAPN1-225ENST00000533704 GLOD4Q9HC38 313 aa10.38□□□□□ -0.75
CAPN1-225ENST00000533704 ARFGAP3Q9NP61 516 aa10.38□□□□□ -0.75
CAPN1-225ENST00000533704 ASCL3Q9NQ33 180 aa10.38□□□□□ -0.75
CAPN1-225ENST00000533704 TRNAU1APQ9NX07 287 aaKnown RBP10.38□□□□□ -0.75
CAPN1-225ENST00000533704 UBP1Q9NZI7 540 aa10.38□□□□□ -0.75
CAPN1-225ENST00000533704 ZNHIT2Q9UHR6 403 aa10.38□□□□□ -0.75
CAPN1-225ENST00000533704 SLC17A4Q9Y2C5 497 aa10.38□□□□□ -0.75
CAPN1-225ENST00000533704 PRKAB1Q9Y478 270 aa10.38□□□□□ -0.75
CAPN1-225ENST00000533704 ATRXP46100 2492 aa10.38□□□□□ -0.75
CAPN1-225ENST00000533704 TRBV23OR9-2A0A075B6M9 112 aa10.37□□□□□ -0.75
CAPN1-225ENST00000533704 A0A0A6YYK5 440 aaPredicted RBP10.37□□□□□ -0.75
CAPN1-225ENST00000533704 MACROD2A1Z1Q3 448 aa10.37□□□□□ -0.75
CAPN1-225ENST00000533704 FADS2P1A8MWK0 482 aa10.37□□□□□ -0.75
CAPN1-225ENST00000533704 KLK10O43240 276 aa10.37□□□□□ -0.75
CAPN1-225ENST00000533704 ZRANB2O95218 330 aaKnown RBP eCLIP10.37□□□□□ -0.754e-7■■■■■ 32.1
CAPN1-225ENST00000533704 FGF1P05230 155 aa10.37□□□□□ -0.75
CAPN1-225ENST00000533704 HGFP14210 728 aa10.37□□□□□ -0.75
CAPN1-225ENST00000533704 PTPN3P26045 913 aa10.37□□□□□ -0.75
CAPN1-225ENST00000533704 ALDH4A1P30038 563 aa10.37□□□□□ -0.75
CAPN1-225ENST00000533704 SPINT3P49223 89 aa10.37□□□□□ -0.75
CAPN1-225ENST00000533704 HADHBP55084 474 aaKnown RBP10.37□□□□□ -0.75
CAPN1-225ENST00000533704 OR1D5P58170 312 aa10.37□□□□□ -0.75
CAPN1-225ENST00000533704 CDK18Q07002 472 aa10.37□□□□□ -0.75
CAPN1-225ENST00000533704 PRKD1Q15139 912 aaPredicted RBP10.37□□□□□ -0.75
CAPN1-225ENST00000533704 TFDP3Q5H9I0 405 aa10.37□□□□□ -0.75
CAPN1-225ENST00000533704 PHF19Q5T6S3 580 aa10.37□□□□□ -0.75
CAPN1-225ENST00000533704 CCDC181Q5TID7 509 aa10.37□□□□□ -0.75
CAPN1-225ENST00000533704 BZW1Q7L1Q6 419 aaKnown RBP10.37□□□□□ -0.75
CAPN1-225ENST00000533704 RAB11FIP2Q7L804 512 aa10.37□□□□□ -0.75
CAPN1-225ENST00000533704 KATNAL2Q8IYT4 538 aa10.37□□□□□ -0.75
CAPN1-225ENST00000533704 ARL14Q8N4G2 192 aa10.37□□□□□ -0.75
CAPN1-225ENST00000533704 KRT35Q92764 455 aa10.37□□□□□ -0.75
CAPN1-225ENST00000533704 P3H4Q92791 437 aa10.37□□□□□ -0.75
CAPN1-225ENST00000533704 TMEM74Q96NL1 305 aa10.37□□□□□ -0.75
CAPN1-225ENST00000533704 FCRL3Q96P31 734 aaPredicted RBP10.37□□□□□ -0.75
CAPN1-225ENST00000533704 LYSMD1Q96S90 227 aa10.37□□□□□ -0.75
CAPN1-225ENST00000533704 SPATA16Q9BXB7 569 aa10.37□□□□□ -0.75
CAPN1-225ENST00000533704 GPR63Q9BZJ6 419 aa10.37□□□□□ -0.75
CAPN1-225ENST00000533704 ZFYVE1Q9HBF4 777 aa10.37□□□□□ -0.75
CAPN1-225ENST00000533704 KLHL8Q9P2G9 620 aaPredicted RBP10.37□□□□□ -0.75
CAPN1-225ENST00000533704 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.37□□□□□ -0.75
CAPN1-225ENST00000533704 ZNF711Q9Y462 761 aa10.37□□□□□ -0.75
CAPN1-225ENST00000533704 ST14Q9Y5Y6 855 aa10.37□□□□□ -0.75
CAPN1-225ENST00000533704 EPN1Q9Y6I3 576 aaPredicted RBP10.37□□□□□ -0.75
CAPN1-225ENST00000533704 OAS3Q9Y6K5 1087 aaKnown RBP10.37□□□□□ -0.75
CAPN1-225ENST00000533704 hCG_1818297A0A087WSY0 165 aa10.36□□□□□ -0.75
CAPN1-225ENST00000533704 TMX2-CTNND1H3BSU7 103 aa10.36□□□□□ -0.75
CAPN1-225ENST00000533704 PLD2O14939 933 aa10.36□□□□□ -0.75
CAPN1-225ENST00000533704 NUDT21O43809 227 aaKnown RBP10.36□□□□□ -0.75
CAPN1-225ENST00000533704 SNX2O60749 519 aa10.36□□□□□ -0.75
CAPN1-225ENST00000533704 DXOO77932 396 aaKnown RBP10.36□□□□□ -0.75
CAPN1-225ENST00000533704 NDUFA10O95299 355 aa10.36□□□□□ -0.75
CAPN1-225ENST00000533704 LCA5LO95447 670 aa10.36□□□□□ -0.75
CAPN1-225ENST00000533704 JMJD7P0C870 316 aa10.36□□□□□ -0.75
CAPN1-225ENST00000533704 NFKB1P19838 968 aa10.36□□□□□ -0.75
CAPN1-225ENST00000533704 TNNT3P45378 269 aaPredicted RBP10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms