RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 SPATA19Q7Z5L4 167 aa17.5■□□□□ 0.39
PHRF1-205ENST00000533464 EPHX4Q8IUS5 362 aa17.5■□□□□ 0.39
PHRF1-205ENST00000533464 OR2T12Q8NG77 320 aa17.5■□□□□ 0.39
PHRF1-205ENST00000533464 FUBP3Q96I24 572 aaKnown RBP eCLIP17.5■□□□□ 0.39
PHRF1-205ENST00000533464 APOLD1Q96LR9 279 aa17.5■□□□□ 0.39
PHRF1-205ENST00000533464 OXCT2Q9BYC2 517 aaPredicted RBP17.5■□□□□ 0.39
PHRF1-205ENST00000533464 NDOR1Q9UHB4 597 aa17.5■□□□□ 0.39
PHRF1-205ENST00000533464 GMPPBQ9Y5P6 360 aa17.5■□□□□ 0.39
PHRF1-205ENST00000533464 GOLGA4Q13439 2230 aaKnown RBP17.5■□□□□ 0.39
PHRF1-205ENST00000533464 STK16O75716 305 aa17.5■□□□□ 0.39
PHRF1-205ENST00000533464 IFNGR2P38484 337 aa17.5■□□□□ 0.39
PHRF1-205ENST00000533464 VPS26BQ4G0F5 336 aa17.5■□□□□ 0.39
PHRF1-205ENST00000533464 DGKKQ5KSL6 1271 aa17.5■□□□□ 0.39
PHRF1-205ENST00000533464 NCBP2-AS2Q69YL0 99 aa17.5■□□□□ 0.39
PHRF1-205ENST00000533464 PAGE2Q7Z2X7 111 aa17.5■□□□□ 0.39
PHRF1-205ENST00000533464 RASAL3Q86YV0 1011 aa17.5■□□□□ 0.39
PHRF1-205ENST00000533464 SFRP1Q8N474 314 aa17.5■□□□□ 0.39
PHRF1-205ENST00000533464 OR8D1Q8WZ84 308 aa17.5■□□□□ 0.39
PHRF1-205ENST00000533464 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.5■□□□□ 0.39
PHRF1-205ENST00000533464 ZNF490Q9ULM2 529 aaPredicted RBP17.5■□□□□ 0.39
PHRF1-205ENST00000533464 TBX18O95935 607 aa17.49■□□□□ 0.39
PHRF1-205ENST00000533464 SLC35G4P0C7Q5 338 aa17.49■□□□□ 0.39
PHRF1-205ENST00000533464 GSTT1P30711 240 aa17.49■□□□□ 0.39
PHRF1-205ENST00000533464 RPL3P39023 403 aaKnown RBP17.49■□□□□ 0.39
PHRF1-205ENST00000533464 CLCQ05315 142 aa17.49■□□□□ 0.39
PHRF1-205ENST00000533464 B3GNT6Q6ZMB0 384 aa17.49■□□□□ 0.39
PHRF1-205ENST00000533464 SLC35F5Q8WV83 523 aa17.49■□□□□ 0.39
PHRF1-205ENST00000533464 TIFAQ96CG3 184 aa17.49■□□□□ 0.39
PHRF1-205ENST00000533464 FAIM2Q9BWQ8 316 aa17.49■□□□□ 0.39
PHRF1-205ENST00000533464 SLC7A4O43246 635 aa17.49■□□□□ 0.39
PHRF1-205ENST00000533464 CTSEP14091 401 aa17.49■□□□□ 0.39
PHRF1-205ENST00000533464 TTKP33981 857 aa17.49■□□□□ 0.39
PHRF1-205ENST00000533464 SCNN1AP37088 669 aa17.49■□□□□ 0.39
PHRF1-205ENST00000533464 SPAM1P38567 509 aa17.49■□□□□ 0.39
PHRF1-205ENST00000533464 PEX6Q13608 980 aa17.49■□□□□ 0.39
PHRF1-205ENST00000533464 FAM46CQ5VWP2 391 aa17.49■□□□□ 0.39
PHRF1-205ENST00000533464 RAVER1Q8IY67 606 aaKnown RBP17.49■□□□□ 0.39
PHRF1-205ENST00000533464 ARL14EPQ8N8R7 260 aaPredicted RBP17.49■□□□□ 0.39
PHRF1-205ENST00000533464 RNFT2Q96EX2 444 aa17.49■□□□□ 0.39
PHRF1-205ENST00000533464 BORCS6Q96GS4 357 aa17.49■□□□□ 0.39
PHRF1-205ENST00000533464 NOL11Q9H8H0 719 aaKnown RBP17.49■□□□□ 0.39
PHRF1-205ENST00000533464 IPPKQ9H8X2 491 aa17.49■□□□□ 0.39
PHRF1-205ENST00000533464 POLR1BQ9H9Y6 1135 aa17.49■□□□□ 0.39
PHRF1-205ENST00000533464 SLC17A6Q9P2U8 582 aa17.49■□□□□ 0.39
PHRF1-205ENST00000533464 SAMHD1Q9Y3Z3 626 aaKnown RBP17.49■□□□□ 0.39
PHRF1-205ENST00000533464 C9IYK1 514 aa17.49■□□□□ 0.39
PHRF1-205ENST00000533464 H0Y858 1186 aa17.49■□□□□ 0.39
PHRF1-205ENST00000533464 MYL12BO14950 172 aa17.49■□□□□ 0.39
PHRF1-205ENST00000533464 CDK14O94921 469 aa17.49■□□□□ 0.39
PHRF1-205ENST00000533464 VAV1P15498 845 aa17.49■□□□□ 0.39
PHRF1-205ENST00000533464 NELFEP18615 380 aaKnown RBP17.49■□□□□ 0.39
PHRF1-205ENST00000533464 GJA9P57773 515 aa17.49■□□□□ 0.39
PHRF1-205ENST00000533464 LCP2Q13094 533 aa17.49■□□□□ 0.39
PHRF1-205ENST00000533464 MAPK11Q15759 364 aa17.49■□□□□ 0.39
PHRF1-205ENST00000533464 MTX3Q5HYI7 312 aa17.49■□□□□ 0.39
PHRF1-205ENST00000533464 KIAA1324Q6UXG2 1013 aaKnown RBP17.49■□□□□ 0.39
PHRF1-205ENST00000533464 OTOP2Q7RTS6 562 aa17.49■□□□□ 0.39
PHRF1-205ENST00000533464 BRSK1Q8TDC3 778 aa17.49■□□□□ 0.39
PHRF1-205ENST00000533464 HAPLN3Q96S86 360 aa17.49■□□□□ 0.39
PHRF1-205ENST00000533464 MYOCQ99972 504 aa17.49■□□□□ 0.39
PHRF1-205ENST00000533464 KLHL25Q9H0H3 589 aa17.49■□□□□ 0.39
PHRF1-205ENST00000533464 FCF1Q9Y324 198 aaKnown RBP17.49■□□□□ 0.39
PHRF1-205ENST00000533464 CAPN8A6NHC0 703 aa17.49■□□□□ 0.39
PHRF1-205ENST00000533464 C9JVG2 144 aa17.49■□□□□ 0.39
PHRF1-205ENST00000533464 EIF2S1P05198 315 aaKnown RBP17.49■□□□□ 0.39
PHRF1-205ENST00000533464 TALDO1P37837 337 aa17.49■□□□□ 0.39
PHRF1-205ENST00000533464 SLC25A11Q02978 314 aaKnown RBP17.49■□□□□ 0.39
PHRF1-205ENST00000533464 GATAD2AQ86YP4 633 aa17.49■□□□□ 0.39
PHRF1-205ENST00000533464 SIX4Q9UIU6 781 aa17.49■□□□□ 0.39
PHRF1-205ENST00000533464 MED26O95402 600 aa17.48■□□□□ 0.39
PHRF1-205ENST00000533464 ADH1CP00326 375 aa17.48■□□□□ 0.39
PHRF1-205ENST00000533464 ZBTB2Q8N680 514 aa17.48■□□□□ 0.39
PHRF1-205ENST00000533464 FBXO22Q8NEZ5 403 aa17.48■□□□□ 0.39
PHRF1-205ENST00000533464 LMO3Q8TAP4 145 aa17.48■□□□□ 0.39
PHRF1-205ENST00000533464 DDX1Q92499 740 aaKnown RBP17.48■□□□□ 0.39
PHRF1-205ENST00000533464 CXorf40BQ96DE9 158 aa17.48■□□□□ 0.39
PHRF1-205ENST00000533464 CPQQ9Y646 472 aa17.48■□□□□ 0.39
PHRF1-205ENST00000533464 STYXL1Q9Y6J8 313 aa17.48■□□□□ 0.39
PHRF1-205ENST00000533464 CCL16O15467 120 aa17.48■□□□□ 0.39
PHRF1-205ENST00000533464 HCRTO43612 131 aa17.48■□□□□ 0.39
PHRF1-205ENST00000533464 ERAL1O75616 437 aaKnown RBP17.48■□□□□ 0.39
PHRF1-205ENST00000533464 IDH3AP50213 366 aa17.48■□□□□ 0.39
PHRF1-205ENST00000533464 OLFML1Q6UWY5 402 aa17.48■□□□□ 0.39
PHRF1-205ENST00000533464 FKBPLQ9UIM3 349 aa17.48■□□□□ 0.39
PHRF1-205ENST00000533464 CNTN6Q9UQ52 1028 aa17.48■□□□□ 0.39
PHRF1-205ENST00000533464 PTPRJQ12913 1337 aa17.48■□□□□ 0.39
PHRF1-205ENST00000533464 CA12O43570 354 aa17.48■□□□□ 0.39
PHRF1-205ENST00000533464 TLX1P31314 330 aaPredicted RBP17.48■□□□□ 0.39
PHRF1-205ENST00000533464 HSPA7P48741 367 aa17.48■□□□□ 0.39
PHRF1-205ENST00000533464 USP46P62068 366 aa17.48■□□□□ 0.39
PHRF1-205ENST00000533464 CRHR2Q13324 411 aa17.48■□□□□ 0.39
PHRF1-205ENST00000533464 DGUOKQ16854 277 aa17.48■□□□□ 0.39
PHRF1-205ENST00000533464 USP39Q53GS9 565 aaKnown RBP17.48■□□□□ 0.39
PHRF1-205ENST00000533464 BROXQ5VW32 411 aa17.48■□□□□ 0.39
PHRF1-205ENST00000533464 KIAA0930Q6ICG6 404 aaPredicted RBP17.48■□□□□ 0.39
PHRF1-205ENST00000533464 TRAF7Q6Q0C0 670 aa17.48■□□□□ 0.39
PHRF1-205ENST00000533464 HFE2Q6ZVN8 426 aa17.48■□□□□ 0.39
PHRF1-205ENST00000533464 UNC5BQ8IZJ1 945 aa17.48■□□□□ 0.39
PHRF1-205ENST00000533464 FCRL5Q96RD9 977 aa17.48■□□□□ 0.39
PHRF1-205ENST00000533464 HBEGFQ99075 208 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms