RNA–Protein interactions for RNA: ENST00000532800.1

RPUSD4-207, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 2

Gene RPUSD4, Length 1,030 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-207ENST00000532800 TRBV23OR9-2A0A075B6M9 112 aa16.98■□□□□ 0.31
RPUSD4-207ENST00000532800 EML2O95834 649 aa16.98■□□□□ 0.31
RPUSD4-207ENST00000532800 ITGB2P05107 769 aa16.98■□□□□ 0.31
RPUSD4-207ENST00000532800 THRAP10827 490 aa16.98■□□□□ 0.31
RPUSD4-207ENST00000532800 PBX1P40424 430 aa16.98■□□□□ 0.31
RPUSD4-207ENST00000532800 EPHB1P54762 984 aa16.98■□□□□ 0.31
RPUSD4-207ENST00000532800 PAFAH1B3Q15102 231 aaKnown RBP16.98■□□□□ 0.31
RPUSD4-207ENST00000532800 TBR1Q16650 682 aa16.98■□□□□ 0.31
RPUSD4-207ENST00000532800 CLPPQ16740 277 aaPredicted RBP16.98■□□□□ 0.31
RPUSD4-207ENST00000532800 TMEM164Q5U3C3 297 aa16.98■□□□□ 0.31
RPUSD4-207ENST00000532800 ALG1LQ6GMV1 187 aa16.98■□□□□ 0.31
RPUSD4-207ENST00000532800 OR4D9Q8NGE8 314 aa16.98■□□□□ 0.31
RPUSD4-207ENST00000532800 SLC37A2Q8TED4 501 aa16.98■□□□□ 0.31
RPUSD4-207ENST00000532800 COX14Q96I36 57 aa16.98■□□□□ 0.31
RPUSD4-207ENST00000532800 FUCA2Q9BTY2 467 aa16.98■□□□□ 0.31
RPUSD4-207ENST00000532800 RIOK2Q9BVS4 552 aaKnown RBP16.98■□□□□ 0.31
RPUSD4-207ENST00000532800 TDRD1Q9BXT4 1180 aaKnown RBP16.98■□□□□ 0.31
RPUSD4-207ENST00000532800 TRIM4Q9C037 500 aa16.98■□□□□ 0.31
RPUSD4-207ENST00000532800 B3GNT4Q9C0J1 378 aa16.98■□□□□ 0.31
RPUSD4-207ENST00000532800 KCNK4Q9NYG8 393 aa16.98■□□□□ 0.31
RPUSD4-207ENST00000532800 PRKAB1Q9Y478 270 aa16.98■□□□□ 0.31
RPUSD4-207ENST00000532800 TLN1Q9Y490 2541 aaKnown RBP16.97■□□□□ 0.31
RPUSD4-207ENST00000532800 A0A1W2PQJ5 194 aa16.97■□□□□ 0.31
RPUSD4-207ENST00000532800 STMND1H3BQB6 276 aa16.97■□□□□ 0.31
RPUSD4-207ENST00000532800 ZW10O43264 779 aa16.97■□□□□ 0.31
RPUSD4-207ENST00000532800 CLDN7O95471 211 aa16.97■□□□□ 0.31
RPUSD4-207ENST00000532800 PRLP01236 227 aa16.97■□□□□ 0.31
RPUSD4-207ENST00000532800 HLA-DQB2P05538 268 aa16.97■□□□□ 0.31
RPUSD4-207ENST00000532800 ZNF30P17039 623 aa16.97■□□□□ 0.31
RPUSD4-207ENST00000532800 ITGB6P18564 788 aa16.97■□□□□ 0.31
RPUSD4-207ENST00000532800 NIPAL4Q0D2K0 466 aa16.97■□□□□ 0.31
RPUSD4-207ENST00000532800 CCDC122Q5T0U0 273 aa16.97■□□□□ 0.31
RPUSD4-207ENST00000532800 ZNF765Q7L2R6 523 aa16.97■□□□□ 0.31
RPUSD4-207ENST00000532800 GALNT13Q8IUC8 556 aa16.97■□□□□ 0.31
RPUSD4-207ENST00000532800 LRRC49Q8IUZ0 686 aa16.97■□□□□ 0.31
RPUSD4-207ENST00000532800 NDUFAF2Q8N183 169 aa16.97■□□□□ 0.31
RPUSD4-207ENST00000532800 ZSCAN1Q8NBB4 408 aa16.97■□□□□ 0.31
RPUSD4-207ENST00000532800 ARRDC2Q8TBH0 407 aa16.97■□□□□ 0.31
RPUSD4-207ENST00000532800 ART4Q93070 314 aa16.97■□□□□ 0.31
RPUSD4-207ENST00000532800 TAAR9Q96RI9 348 aa16.97■□□□□ 0.31
RPUSD4-207ENST00000532800 ZMYND15Q9H091 742 aa16.97■□□□□ 0.31
RPUSD4-207ENST00000532800 RBM22Q9NW64 420 aaKnown RBP eCLIP16.97■□□□□ 0.31
RPUSD4-207ENST00000532800 B3GALT1Q9Y5Z6 326 aa16.97■□□□□ 0.31
RPUSD4-207ENST00000532800 BZW2Q9Y6E2 419 aaKnown RBP16.97■□□□□ 0.31
RPUSD4-207ENST00000532800 OAS3Q9Y6K5 1087 aaKnown RBP16.97■□□□□ 0.31
RPUSD4-207ENST00000532800 MYO1FO00160 1098 aa16.96■□□□□ 0.31
RPUSD4-207ENST00000532800 MATN3O15232 486 aa16.96■□□□□ 0.31
RPUSD4-207ENST00000532800 ASMTLO95671 621 aa16.96■□□□□ 0.31
RPUSD4-207ENST00000532800 ATP1A1P05023 1023 aaKnown RBP16.96■□□□□ 0.31
RPUSD4-207ENST00000532800 SERPING1P05155 500 aa16.96■□□□□ 0.31
RPUSD4-207ENST00000532800 FASLGP48023 281 aa16.96■□□□□ 0.31
RPUSD4-207ENST00000532800 FANCCQ00597 558 aa16.96■□□□□ 0.31
RPUSD4-207ENST00000532800 GBE1Q04446 702 aa16.96■□□□□ 0.31
RPUSD4-207ENST00000532800 TRA2AQ13595 282 aaKnown RBP eCLIP16.96■□□□□ 0.31
RPUSD4-207ENST00000532800 PEX6Q13608 980 aa16.96■□□□□ 0.31
RPUSD4-207ENST00000532800 NFKBIBQ15653 356 aa16.96■□□□□ 0.31
RPUSD4-207ENST00000532800 ANKRD20A8PQ5CZ79 823 aa16.96■□□□□ 0.31
RPUSD4-207ENST00000532800 TIGD7Q6NT04 549 aaPredicted RBP16.96■□□□□ 0.31
RPUSD4-207ENST00000532800 NLRP8Q86W28 1048 aa16.96■□□□□ 0.31
RPUSD4-207ENST00000532800 AGBL5Q8NDL9 886 aa16.96■□□□□ 0.31
RPUSD4-207ENST00000532800 LPCAT1Q8NF37 534 aa16.96■□□□□ 0.31
RPUSD4-207ENST00000532800 ZNF564Q8TBZ8 553 aaPredicted RBP16.96■□□□□ 0.31
RPUSD4-207ENST00000532800 CPLX3Q8WVH0 158 aa16.96■□□□□ 0.31
RPUSD4-207ENST00000532800 SYN2Q92777 582 aaPredicted RBP16.96■□□□□ 0.31
RPUSD4-207ENST00000532800 NKD1Q969G9 470 aa16.96■□□□□ 0.31
RPUSD4-207ENST00000532800 WDR24Q96S15 920 aa16.96■□□□□ 0.31
RPUSD4-207ENST00000532800 FAM117AQ9C073 453 aa16.96■□□□□ 0.31
RPUSD4-207ENST00000532800 CLMPQ9H6B4 373 aa16.96■□□□□ 0.31
RPUSD4-207ENST00000532800 STARD5Q9NSY2 213 aa16.96■□□□□ 0.31
RPUSD4-207ENST00000532800 OCIAD1Q9NX40 245 aa16.96■□□□□ 0.31
RPUSD4-207ENST00000532800 CNOT6Q9ULM6 557 aaKnown RBP16.96■□□□□ 0.31
RPUSD4-207ENST00000532800 PCDHGA3Q9Y5H0 932 aa16.96■□□□□ 0.31
RPUSD4-207ENST00000532800 HEMK1Q9Y5R4 338 aaPredicted RBP16.96■□□□□ 0.31
RPUSD4-207ENST00000532800 SPTA1P02549 2419 aa16.95■□□□□ 0.3
RPUSD4-207ENST00000532800 DNAJC6O75061 913 aa16.95■□□□□ 0.3
RPUSD4-207ENST00000532800 CSTF2P33240 577 aaKnown RBP eCLIP16.95■□□□□ 0.3
RPUSD4-207ENST00000532800 UGT1A3P35503 534 aa16.95■□□□□ 0.3
RPUSD4-207ENST00000532800 PPM1FP49593 454 aaPredicted RBP16.95■□□□□ 0.3
RPUSD4-207ENST00000532800 TAS2R40P59535 323 aa16.95■□□□□ 0.3
RPUSD4-207ENST00000532800 SQSTM1Q13501 440 aa16.95■□□□□ 0.3
RPUSD4-207ENST00000532800 CLCA4Q14CN2 919 aa16.95■□□□□ 0.3
RPUSD4-207ENST00000532800 IFI16Q16666 785 aaKnown RBP16.95■□□□□ 0.3
RPUSD4-207ENST00000532800 HADHQ16836 314 aaKnown RBP16.95■□□□□ 0.3
RPUSD4-207ENST00000532800 FAM182AQ5T1J6 154 aa16.95■□□□□ 0.3
RPUSD4-207ENST00000532800 TMEM71Q6P5X7 295 aa16.95■□□□□ 0.3
RPUSD4-207ENST00000532800 ALKBH5Q6P6C2 394 aaKnown RBP16.95■□□□□ 0.3
RPUSD4-207ENST00000532800 XKR5Q6UX68 686 aa16.95■□□□□ 0.3
RPUSD4-207ENST00000532800 LUZP1Q86V48 1076 aa16.95■□□□□ 0.3
RPUSD4-207ENST00000532800 FAM129CQ86XR2 697 aa16.95■□□□□ 0.3
RPUSD4-207ENST00000532800 NRSN1Q8IZ57 195 aa16.95■□□□□ 0.3
RPUSD4-207ENST00000532800 SFRP1Q8N474 314 aa16.95■□□□□ 0.3
RPUSD4-207ENST00000532800 EXD1Q8NHP7 514 aa16.95■□□□□ 0.3
RPUSD4-207ENST00000532800 SLC38A3Q99624 504 aa16.95■□□□□ 0.3
RPUSD4-207ENST00000532800 ZNF670Q9BS34 389 aa16.95■□□□□ 0.3
RPUSD4-207ENST00000532800 CBX8Q9HC52 389 aa16.95■□□□□ 0.3
RPUSD4-207ENST00000532800 PCDH9Q9HC56 1237 aa16.95■□□□□ 0.3
RPUSD4-207ENST00000532800 ZNHIT2Q9UHR6 403 aa16.95■□□□□ 0.3
RPUSD4-207ENST00000532800 KCNK6Q9Y257 313 aa16.95■□□□□ 0.3
RPUSD4-207ENST00000532800 C1orf232A0A0U1RR37 186 aa16.94■□□□□ 0.3
RPUSD4-207ENST00000532800 EFCAB7A8K855 629 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms