RNA–Protein interactions for RNA: ENST00000531967.5

ECHDC1-222, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ECHDC1, Length 2,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-222ENST00000531967 F2RL1P55085 397 aa5.24□□□□□ -1.57
ECHDC1-222ENST00000531967 RPS8P62241 208 aaKnown RBP5.24□□□□□ -1.57
ECHDC1-222ENST00000531967 PCOLCEQ15113 449 aa5.24□□□□□ -1.57
ECHDC1-222ENST00000531967 SNAPC1Q16533 368 aa5.24□□□□□ -1.57
ECHDC1-222ENST00000531967 C19orf54Q5BKX5 351 aa5.24□□□□□ -1.57
ECHDC1-222ENST00000531967 CDKAL1Q5VV42 579 aa5.24□□□□□ -1.57
ECHDC1-222ENST00000531967 C8orf74Q6P047 294 aa5.24□□□□□ -1.57
ECHDC1-222ENST00000531967 GALNT18Q6P9A2 607 aa5.24□□□□□ -1.57
ECHDC1-222ENST00000531967 ZPBP2Q6X784 338 aa5.24□□□□□ -1.57
ECHDC1-222ENST00000531967 EXOC3L1Q86VI1 746 aa5.24□□□□□ -1.57
ECHDC1-222ENST00000531967 REPS2Q8NFH8 660 aa5.24□□□□□ -1.57
ECHDC1-222ENST00000531967 CLHC1Q8NHS4 586 aa5.24□□□□□ -1.57
ECHDC1-222ENST00000531967 RAB40AQ8WXH6 277 aa5.24□□□□□ -1.57
ECHDC1-222ENST00000531967 DVL3Q92997 716 aaPredicted RBP5.24□□□□□ -1.57
ECHDC1-222ENST00000531967 RASD2Q96D21 266 aa5.24□□□□□ -1.57
ECHDC1-222ENST00000531967 RPRD1AQ96P16 312 aaPredicted RBP5.24□□□□□ -1.57
ECHDC1-222ENST00000531967 PAAF1Q9BRP4 392 aa5.24□□□□□ -1.57
ECHDC1-222ENST00000531967 IFIH1Q9BYX4 1025 aaKnown RBP5.24□□□□□ -1.57
ECHDC1-222ENST00000531967 GPR62Q9BZJ7 368 aa5.24□□□□□ -1.57
ECHDC1-222ENST00000531967 EPC1Q9H2F5 836 aa5.24□□□□□ -1.57
ECHDC1-222ENST00000531967 SUGCTQ9HAC7 445 aa5.24□□□□□ -1.57
ECHDC1-222ENST00000531967 ETNK2Q9NVF9 386 aa5.24□□□□□ -1.57
ECHDC1-222ENST00000531967 HYPKQ9NX55 129 aa5.24□□□□□ -1.57
ECHDC1-222ENST00000531967 ERVK13-1Q9NX77 482 aa5.24□□□□□ -1.57
ECHDC1-222ENST00000531967 FBXW11Q9UKB1 542 aa5.24□□□□□ -1.57
ECHDC1-222ENST00000531967 TRPC5Q9UL62 973 aaPredicted RBP5.24□□□□□ -1.57
ECHDC1-222ENST00000531967 NSFL1CQ9UNZ2 370 aaKnown RBP5.24□□□□□ -1.57
ECHDC1-222ENST00000531967 WIPF3A6NGB9 483 aa5.23□□□□□ -1.57
ECHDC1-222ENST00000531967 B4GALT2O60909 372 aa5.23□□□□□ -1.57
ECHDC1-222ENST00000531967 CLUP10909 449 aa5.23□□□□□ -1.57
ECHDC1-222ENST00000531967 CYP2C9P11712 490 aa5.23□□□□□ -1.57
ECHDC1-222ENST00000531967 SMPD1P17405 629 aa5.23□□□□□ -1.57
ECHDC1-222ENST00000531967 THBS4P35443 961 aa5.23□□□□□ -1.57
ECHDC1-222ENST00000531967 VIPR2P41587 438 aa5.23□□□□□ -1.57
ECHDC1-222ENST00000531967 PREPP48147 710 aa5.23□□□□□ -1.57
ECHDC1-222ENST00000531967 NDUFV1P49821 464 aa5.23□□□□□ -1.57
ECHDC1-222ENST00000531967 ARSFP54793 590 aa5.23□□□□□ -1.57
ECHDC1-222ENST00000531967 TUBA1BP68363 451 aa5.23□□□□□ -1.57
ECHDC1-222ENST00000531967 GALK2Q01415 458 aa5.23□□□□□ -1.57
ECHDC1-222ENST00000531967 SLC36A3Q495N2 470 aa5.23□□□□□ -1.57
ECHDC1-222ENST00000531967 SLFN13Q68D06 897 aa5.23□□□□□ -1.57
ECHDC1-222ENST00000531967 KIAA1324Q6UXG2 1013 aaKnown RBP5.23□□□□□ -1.57
ECHDC1-222ENST00000531967 RANBP10Q6VN20 620 aa5.23□□□□□ -1.57
ECHDC1-222ENST00000531967 C11orf57Q6ZUT1 292 aaPredicted RBP5.23□□□□□ -1.57
ECHDC1-222ENST00000531967 TUBA1AQ71U36 451 aa5.23□□□□□ -1.57
ECHDC1-222ENST00000531967 RTN4RL2Q86UN3 420 aa5.23□□□□□ -1.57
ECHDC1-222ENST00000531967 SYCE1Q8N0S2 351 aa5.23□□□□□ -1.57
ECHDC1-222ENST00000531967 FAM46DQ8NEK8 389 aa5.23□□□□□ -1.57
ECHDC1-222ENST00000531967 LIPHQ8WWY8 451 aa5.23□□□□□ -1.57
ECHDC1-222ENST00000531967 DPF1Q92782 380 aa5.23□□□□□ -1.57
ECHDC1-222ENST00000531967 RRNAD1Q96FB5 475 aaKnown RBP5.23□□□□□ -1.57
ECHDC1-222ENST00000531967 HMCESQ96FZ2 354 aa5.23□□□□□ -1.57
ECHDC1-222ENST00000531967 COQ10AQ96MF6 247 aa5.23□□□□□ -1.57
ECHDC1-222ENST00000531967 KATNB1Q9BVA0 655 aa5.23□□□□□ -1.57
ECHDC1-222ENST00000531967 OSBPL10Q9BXB5 764 aa5.23□□□□□ -1.57
ECHDC1-222ENST00000531967 C20orf141Q9NUB4 165 aa5.23□□□□□ -1.57
ECHDC1-222ENST00000531967 THAP1Q9NVV9 213 aa5.23□□□□□ -1.57
ECHDC1-222ENST00000531967 RAB21Q9UL25 225 aa5.23□□□□□ -1.57
ECHDC1-222ENST00000531967 VPS4AQ9UN37 437 aa5.23□□□□□ -1.57
ECHDC1-222ENST00000531967 PCDHB4Q9Y5E5 795 aa5.23□□□□□ -1.57
ECHDC1-222ENST00000531967 ZMYM4Q5VZL5 1548 aa5.23□□□□□ -1.57
ECHDC1-222ENST00000531967 CASKIN1Q8WXD9 1431 aa5.23□□□□□ -1.57
ECHDC1-222ENST00000531967 A0A1W2PR77 199 aa5.23□□□□□ -1.57
ECHDC1-222ENST00000531967 C5orf52A6NGY3 159 aa5.23□□□□□ -1.57
ECHDC1-222ENST00000531967 HRKO00198 91 aa5.23□□□□□ -1.57
ECHDC1-222ENST00000531967 CYR61O00622 381 aa5.23□□□□□ -1.57
ECHDC1-222ENST00000531967 SLC43A1O75387 559 aa5.23□□□□□ -1.57
ECHDC1-222ENST00000531967 AGTP01019 485 aa5.23□□□□□ -1.57
ECHDC1-222ENST00000531967 ENO2P09104 434 aaPredicted RBP5.23□□□□□ -1.57
ECHDC1-222ENST00000531967 SBK2P0C263 348 aa5.23□□□□□ -1.57
ECHDC1-222ENST00000531967 IQCF3P0C7M6 154 aa5.23□□□□□ -1.57
ECHDC1-222ENST00000531967 PEPDP12955 493 aa5.23□□□□□ -1.57
ECHDC1-222ENST00000531967 APEX1P27695 318 aaKnown RBP5.23□□□□□ -1.57
ECHDC1-222ENST00000531967 PTGS2P35354 604 aa5.23□□□□□ -1.57
ECHDC1-222ENST00000531967 SLC19A1P41440 591 aa5.23□□□□□ -1.57
ECHDC1-222ENST00000531967 SERPINH1P50454 418 aaKnown RBP5.23□□□□□ -1.57
ECHDC1-222ENST00000531967 EFNA5P52803 228 aa5.23□□□□□ -1.57
ECHDC1-222ENST00000531967 AIF1P55008 147 aa5.23□□□□□ -1.57
ECHDC1-222ENST00000531967 SRP54P61011 504 aaKnown RBP5.23□□□□□ -1.57
ECHDC1-222ENST00000531967 KRT31Q15323 416 aa5.23□□□□□ -1.57
ECHDC1-222ENST00000531967 GPAT3Q53EU6 434 aa5.23□□□□□ -1.57
ECHDC1-222ENST00000531967 ARMC12Q5T9G4 340 aa5.23□□□□□ -1.57
ECHDC1-222ENST00000531967 NANOGNBQ7Z5D8 188 aa5.23□□□□□ -1.57
ECHDC1-222ENST00000531967 PDSS2Q86YH6 399 aa5.23□□□□□ -1.57
ECHDC1-222ENST00000531967 WFDC8Q8IUA0 241 aa5.23□□□□□ -1.57
ECHDC1-222ENST00000531967 ZDHHC21Q8IVQ6 265 aa5.23□□□□□ -1.57
ECHDC1-222ENST00000531967 SMG8Q8ND04 991 aaKnown RBP5.23□□□□□ -1.57
ECHDC1-222ENST00000531967 OR5AN1Q8NGI8 311 aa5.23□□□□□ -1.57
ECHDC1-222ENST00000531967 MBD3L2Q8NHZ7 208 aaPredicted RBP5.23□□□□□ -1.57
ECHDC1-222ENST00000531967 NCOA7Q8NI08 942 aa5.23□□□□□ -1.57
ECHDC1-222ENST00000531967 ST6GALNAC6Q969X2 333 aa5.23□□□□□ -1.57
ECHDC1-222ENST00000531967 MARVELD3Q96A59 401 aa5.23□□□□□ -1.57
ECHDC1-222ENST00000531967 CDRT15Q96T59 188 aa5.23□□□□□ -1.57
ECHDC1-222ENST00000531967 SERHL2Q9H4I8 314 aa5.23□□□□□ -1.57
ECHDC1-222ENST00000531967 TLR9Q9NR96 1032 aa5.23□□□□□ -1.57
ECHDC1-222ENST00000531967 TRPM5Q9NZQ8 1165 aa5.23□□□□□ -1.57
ECHDC1-222ENST00000531967 DLGAP2Q9P1A6 1054 aa5.23□□□□□ -1.57
ECHDC1-222ENST00000531967 PTGFRNQ9P2B2 879 aa5.23□□□□□ -1.57
ECHDC1-222ENST00000531967 DDX25Q9UHL0 483 aaKnown RBP5.23□□□□□ -1.57
ECHDC1-222ENST00000531967 DNMT3LQ9UJW3 386 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms