RNA–Protein interactions for RNA: ENST00000531857.1

PKP3-208, Transcript of plakophilin 3, humanhuman

TSL 4

Gene PKP3, Length 687 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-208ENST00000531857 HCAR3P49019 387 aa17.23■□□□□ 0.35
PKP3-208ENST00000531857 UBXN1Q04323 297 aa17.23■□□□□ 0.35
PKP3-208ENST00000531857 DPTQ07507 201 aa17.23■□□□□ 0.35
PKP3-208ENST00000531857 MARK2Q7KZI7 788 aaKnown RBP17.23■□□□□ 0.35
PKP3-208ENST00000531857 IRF2BP2Q7Z5L9 587 aa17.23■□□□□ 0.35
PKP3-208ENST00000531857 NRSN1Q8IZ57 195 aa17.23■□□□□ 0.35
PKP3-208ENST00000531857 SPC24Q8NBT2 197 aa17.23■□□□□ 0.35
PKP3-208ENST00000531857 RTP4Q96DX8 246 aa17.23■□□□□ 0.35
PKP3-208ENST00000531857 SCRN2Q96FV2 425 aa17.23■□□□□ 0.35
PKP3-208ENST00000531857 OR2M4Q96R27 311 aa17.23■□□□□ 0.35
PKP3-208ENST00000531857 CTRCQ99895 268 aa17.23■□□□□ 0.35
PKP3-208ENST00000531857 MGME1Q9BQP7 344 aa17.23■□□□□ 0.35
PKP3-208ENST00000531857 XPO4Q9C0E2 1151 aaKnown RBP17.23■□□□□ 0.35
PKP3-208ENST00000531857 ZNF71Q9NQZ8 489 aaPredicted RBP17.23■□□□□ 0.35
PKP3-208ENST00000531857 ETNK2Q9NVF9 386 aa17.23■□□□□ 0.35
PKP3-208ENST00000531857 PDP2Q9P2J9 529 aa17.23■□□□□ 0.35
PKP3-208ENST00000531857 LIMA1Q9UHB6 759 aaKnown RBP17.23■□□□□ 0.35
PKP3-208ENST00000531857 LOC101059948A0A1B0GTJ6 334 aa17.22■□□□□ 0.35
PKP3-208ENST00000531857 PRPSAP2O60256 369 aa17.22■□□□□ 0.35
PKP3-208ENST00000531857 RNF8O76064 485 aa17.22■□□□□ 0.35
PKP3-208ENST00000531857 PGLSO95336 258 aa17.22■□□□□ 0.35
PKP3-208ENST00000531857 TUBB4AP04350 444 aa17.22■□□□□ 0.35
PKP3-208ENST00000531857 PRKAR1AP10644 381 aa17.22■□□□□ 0.35
PKP3-208ENST00000531857 AMPD1P23109 780 aa17.22■□□□□ 0.35
PKP3-208ENST00000531857 CASRP41180 1078 aa17.22■□□□□ 0.35
PKP3-208ENST00000531857 FASLGP48023 281 aa17.22■□□□□ 0.35
PKP3-208ENST00000531857 GPLD1P80108 840 aa17.22■□□□□ 0.35
PKP3-208ENST00000531857 FOXK1P85037 733 aa17.22■□□□□ 0.35
PKP3-208ENST00000531857 PEX6Q13608 980 aa17.22■□□□□ 0.35
PKP3-208ENST00000531857 PYCR3Q53H96 274 aa17.22■□□□□ 0.35
PKP3-208ENST00000531857 SNAP47Q5SQN1 464 aa17.22■□□□□ 0.35
PKP3-208ENST00000531857 TIPARPQ7Z3E1 657 aaKnown RBP17.22■□□□□ 0.35
PKP3-208ENST00000531857 UNC5BQ8IZJ1 945 aa17.22■□□□□ 0.35
PKP3-208ENST00000531857 LZTR1Q8N653 840 aa17.22■□□□□ 0.35
PKP3-208ENST00000531857 SLC37A2Q8TED4 501 aa17.22■□□□□ 0.35
PKP3-208ENST00000531857 SCAMP4Q969E2 229 aa17.22■□□□□ 0.35
PKP3-208ENST00000531857 SLC45A3Q96JT2 553 aa17.22■□□□□ 0.35
PKP3-208ENST00000531857 CATSPER2Q96P56 530 aa17.22■□□□□ 0.35
PKP3-208ENST00000531857 ERGIC2Q96RQ1 377 aa17.22■□□□□ 0.35
PKP3-208ENST00000531857 MCCC1Q96RQ3 725 aaPredicted RBP17.22■□□□□ 0.35
PKP3-208ENST00000531857 DPYSL5Q9BPU6 564 aa17.22■□□□□ 0.35
PKP3-208ENST00000531857 ZMYND15Q9H091 742 aa17.22■□□□□ 0.35
PKP3-208ENST00000531857 ABCG8Q9H221 673 aa17.22■□□□□ 0.35
PKP3-208ENST00000531857 RRAGDQ9NQL2 400 aaPredicted RBP17.22■□□□□ 0.35
PKP3-208ENST00000531857 PCYT1BQ9Y5K3 369 aaPredicted RBP17.22■□□□□ 0.35
PKP3-208ENST00000531857 MAFKO60675 156 aa17.21■□□□□ 0.35
PKP3-208ENST00000531857 LRCH4O75427 683 aa17.21■□□□□ 0.35
PKP3-208ENST00000531857 PDHA1P08559 390 aa17.21■□□□□ 0.35
PKP3-208ENST00000531857 FERP16591 822 aa17.21■□□□□ 0.35
PKP3-208ENST00000531857 HSPA9P38646 679 aaKnown RBP17.21■□□□□ 0.35
PKP3-208ENST00000531857 RAB15P59190 212 aa17.21■□□□□ 0.35
PKP3-208ENST00000531857 ADAMTSL4Q6UY14 1074 aa17.21■□□□□ 0.35
PKP3-208ENST00000531857 PSTKQ8IV42 348 aaKnown RBP17.21■□□□□ 0.35
PKP3-208ENST00000531857 LRRC8AQ8IWT6 810 aa17.21■□□□□ 0.35
PKP3-208ENST00000531857 NLGN4XQ8N0W4 816 aa17.21■□□□□ 0.35
PKP3-208ENST00000531857 SFRP1Q8N474 314 aa17.21■□□□□ 0.35
PKP3-208ENST00000531857 NLGN4YQ8NFZ3 816 aaPredicted RBP17.21■□□□□ 0.35
PKP3-208ENST00000531857 PIH1D2Q8WWB5 315 aa17.21■□□□□ 0.35
PKP3-208ENST00000531857 AP2M1Q96CW1 435 aa17.21■□□□□ 0.35
PKP3-208ENST00000531857 AHCYL2Q96HN2 611 aaKnown RBP17.21■□□□□ 0.35
PKP3-208ENST00000531857 AGAP2Q99490 1192 aa17.21■□□□□ 0.35
PKP3-208ENST00000531857 SLC38A3Q99624 504 aa17.21■□□□□ 0.35
PKP3-208ENST00000531857 HSD3B7Q9H2F3 369 aa17.21■□□□□ 0.35
PKP3-208ENST00000531857 GPN2Q9H9Y4 310 aaPredicted RBP17.21■□□□□ 0.35
PKP3-208ENST00000531857 PPIL1Q9Y3C6 166 aa17.21■□□□□ 0.35
PKP3-208ENST00000531857 MAP3K6O95382 1288 aa17.2■□□□□ 0.34
PKP3-208ENST00000531857 TCF4P15884 667 aa17.2■□□□□ 0.34
PKP3-208ENST00000531857 NFKBIAP25963 317 aa17.2■□□□□ 0.34
PKP3-208ENST00000531857 IL1R2P27930 398 aa17.2■□□□□ 0.34
PKP3-208ENST00000531857 OAS2P29728 719 aaKnown RBP17.2■□□□□ 0.34
PKP3-208ENST00000531857 PPM1FP49593 454 aaPredicted RBP17.2■□□□□ 0.34
PKP3-208ENST00000531857 TERF1P54274 439 aa17.2■□□□□ 0.34
PKP3-208ENST00000531857 MC2RQ01718 297 aa17.2■□□□□ 0.34
PKP3-208ENST00000531857 CDC20Q12834 499 aa17.2■□□□□ 0.34
PKP3-208ENST00000531857 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.2■□□□□ 0.34
PKP3-208ENST00000531857 ARMC12Q5T9G4 340 aa17.2■□□□□ 0.34
PKP3-208ENST00000531857 LRRC66Q68CR7 880 aa17.2■□□□□ 0.34
PKP3-208ENST00000531857 USP45Q70EL2 814 aa17.2■□□□□ 0.34
PKP3-208ENST00000531857 APTXQ7Z2E3 356 aaKnown RBP17.2■□□□□ 0.34
PKP3-208ENST00000531857 ARHGAP22Q7Z5H3 698 aa17.2■□□□□ 0.34
PKP3-208ENST00000531857 VSTM4Q8IW00 320 aa17.2■□□□□ 0.34
PKP3-208ENST00000531857 OR10G6Q8NH81 332 aa17.2■□□□□ 0.34
PKP3-208ENST00000531857 C9orf43Q8TAL5 461 aaPredicted RBP17.2■□□□□ 0.34
PKP3-208ENST00000531857 IQCDQ96DY2 449 aa17.2■□□□□ 0.34
PKP3-208ENST00000531857 ZWILCHQ9H900 591 aa17.2■□□□□ 0.34
PKP3-208ENST00000531857 APMAPQ9HDC9 416 aa17.2■□□□□ 0.34
PKP3-208ENST00000531857 KCND1Q9NSA2 647 aa17.2■□□□□ 0.34
PKP3-208ENST00000531857 SPTLC3Q9NUV7 552 aa17.2■□□□□ 0.34
PKP3-208ENST00000531857 ANAPC2Q9UJX6 822 aa17.2■□□□□ 0.34
PKP3-208ENST00000531857 PRKAB1Q9Y478 270 aa17.2■□□□□ 0.34
PKP3-208ENST00000531857 A0A1B0GTH6 734 aa17.19■□□□□ 0.34
PKP3-208ENST00000531857 CLEC18AA5D8T8 446 aa17.19■□□□□ 0.34
PKP3-208ENST00000531857 H3BRJ5 948 aa17.19■□□□□ 0.34
PKP3-208ENST00000531857 INPP4BO15327 924 aa17.19■□□□□ 0.34
PKP3-208ENST00000531857 CAPN5O15484 640 aaPredicted RBP17.19■□□□□ 0.34
PKP3-208ENST00000531857 TPM1P09493 284 aa17.19■□□□□ 0.34
PKP3-208ENST00000531857 MAP4P27816 1152 aaKnown RBP17.19■□□□□ 0.34
PKP3-208ENST00000531857 MMP13P45452 471 aa17.19■□□□□ 0.34
PKP3-208ENST00000531857 ZNF135P52742 658 aaPredicted RBP17.19■□□□□ 0.34
PKP3-208ENST00000531857 PTSQ03393 145 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms