RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 PCDH20Q8N6Y1 951 aaKnown RBP4.03□□□□□ -1.76
PTPRK-220ENST00000531466 FGFBP3Q8TAT2 258 aa4.03□□□□□ -1.76
PTPRK-220ENST00000531466 SENP5Q96HI0 755 aaPredicted RBP4.03□□□□□ -1.76
PTPRK-220ENST00000531466 NEUROD6Q96NK8 337 aa4.03□□□□□ -1.76
PTPRK-220ENST00000531466 CD180Q99467 661 aa4.03□□□□□ -1.76
PTPRK-220ENST00000531466 SH3GL2Q99962 352 aa4.03□□□□□ -1.76
PTPRK-220ENST00000531466 PLEKHA4Q9H4M7 779 aa4.03□□□□□ -1.76
PTPRK-220ENST00000531466 MYH16Q9H6N6 1097 aa4.03□□□□□ -1.76
PTPRK-220ENST00000531466 BPIFA1Q9NP55 256 aa4.03□□□□□ -1.76
PTPRK-220ENST00000531466 KIAA1456Q9P272 454 aa4.03□□□□□ -1.76
PTPRK-220ENST00000531466 DAAM1Q9Y4D1 1078 aa4.03□□□□□ -1.76
PTPRK-220ENST00000531466 GATA1P15976 413 aaPredicted RBP4.02□□□□□ -1.77
PTPRK-220ENST00000531466 SHMT1P34896 483 aa4.02□□□□□ -1.77
PTPRK-220ENST00000531466 FAAP20Q6NZ36 180 aa4.02□□□□□ -1.77
PTPRK-220ENST00000531466 METTL2BQ6P1Q9 378 aaKnown RBP4.02□□□□□ -1.77
PTPRK-220ENST00000531466 AMER3Q8N944 861 aa4.02□□□□□ -1.77
PTPRK-220ENST00000531466 GPATCH11Q8N954 259 aa4.02□□□□□ -1.77
PTPRK-220ENST00000531466 DDHD1Q8NEL9 900 aa4.02□□□□□ -1.77
PTPRK-220ENST00000531466 RILPL2Q969X0 211 aa4.02□□□□□ -1.77
PTPRK-220ENST00000531466 ARHGEF26Q96DR7 871 aa4.02□□□□□ -1.77
PTPRK-220ENST00000531466 LTV1Q96GA3 475 aaPredicted RBP4.02□□□□□ -1.77
PTPRK-220ENST00000531466 METTL2AQ96IZ6 378 aaKnown RBP4.02□□□□□ -1.77
PTPRK-220ENST00000531466 QRFPRQ96P65 431 aa4.02□□□□□ -1.77
PTPRK-220ENST00000531466 IWS1Q96ST2 819 aa4.02□□□□□ -1.77
PTPRK-220ENST00000531466 RBM4BQ9BQ04 359 aaKnown RBP4.02□□□□□ -1.77
PTPRK-220ENST00000531466 HINT3Q9NQE9 182 aaKnown RBP4.02□□□□□ -1.77
PTPRK-220ENST00000531466 IL1RAPL1Q9NZN1 696 aa4.02□□□□□ -1.77
PTPRK-220ENST00000531466 FAM96BQ9Y3D0 163 aa4.02□□□□□ -1.77
PTPRK-220ENST00000531466 COL5A2P05997 1499 aaPredicted RBP4.02□□□□□ -1.77
PTPRK-220ENST00000531466 RUNX1T1Q06455 604 aa4.01□□□□□ -1.77
PTPRK-220ENST00000531466 GGNBP1Q5YKI7 109 aa4.01□□□□□ -1.77
PTPRK-220ENST00000531466 ZNF280DQ6N043 979 aa4.01□□□□□ -1.77
PTPRK-220ENST00000531466 METTL7BQ6UX53 244 aa4.01□□□□□ -1.77
PTPRK-220ENST00000531466 ANO5Q75V66 913 aa4.01□□□□□ -1.77
PTPRK-220ENST00000531466 TDRPQ86YL5 185 aa4.01□□□□□ -1.77
PTPRK-220ENST00000531466 ADSSL1Q8N142 457 aa4.01□□□□□ -1.77
PTPRK-220ENST00000531466 OR5R1Q8NH85 324 aa4.01□□□□□ -1.77
PTPRK-220ENST00000531466 EYA3Q99504 573 aa4.01□□□□□ -1.77
PTPRK-220ENST00000531466 MPHOSPH8Q99549 860 aa4.01□□□□□ -1.77
PTPRK-220ENST00000531466 C2orf42Q9NWW7 574 aa4.01□□□□□ -1.77
PTPRK-220ENST00000531466 FAM120CQ9NX05 1096 aaKnown RBP4.01□□□□□ -1.77
PTPRK-220ENST00000531466 BARHL2Q9NY43 387 aa4.01□□□□□ -1.77
PTPRK-220ENST00000531466 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.01□□□□□ -1.77
PTPRK-220ENST00000531466 ZHX2Q9Y6X8 837 aa4.01□□□□□ -1.77
PTPRK-220ENST00000531466 ABHD14A-ACY1A0A1B0GW23 586 aa4□□□□□ -1.77
PTPRK-220ENST00000531466 KLK10O43240 276 aa4□□□□□ -1.77
PTPRK-220ENST00000531466 MT-CYBP00156 380 aaPredicted RBP4□□□□□ -1.77
PTPRK-220ENST00000531466 IFIT2P09913 472 aaKnown RBP4□□□□□ -1.77
PTPRK-220ENST00000531466 POU1F1P28069 291 aa4□□□□□ -1.77
PTPRK-220ENST00000531466 BRAT1Q6PJG6 821 aa4□□□□□ -1.77
PTPRK-220ENST00000531466 TADA2BQ86TJ2 420 aa4□□□□□ -1.77
PTPRK-220ENST00000531466 CCDC146Q8IYE0 955 aa4□□□□□ -1.77
PTPRK-220ENST00000531466 CNPY4Q8N129 248 aa4□□□□□ -1.77
PTPRK-220ENST00000531466 HUS1BQ8NHY5 278 aa4□□□□□ -1.77
PTPRK-220ENST00000531466 STAMQ92783 540 aa4□□□□□ -1.77
PTPRK-220ENST00000531466 RHBDF1Q96CC6 855 aa4□□□□□ -1.77
PTPRK-220ENST00000531466 ORAI1Q96D31 301 aa4□□□□□ -1.77
PTPRK-220ENST00000531466 MOCOSQ96EN8 888 aa4□□□□□ -1.77
PTPRK-220ENST00000531466 C18orf12Q96KH6 178 aa4□□□□□ -1.77
PTPRK-220ENST00000531466 MCRIP2Q9BUT9 160 aaKnown RBP4□□□□□ -1.77
PTPRK-220ENST00000531466 KIF17Q9P2E2 1029 aa4□□□□□ -1.77
PTPRK-220ENST00000531466 PADI3Q9ULW8 664 aa4□□□□□ -1.77
PTPRK-220ENST00000531466 RIPOR2Q9Y4F9 1068 aa4□□□□□ -1.77
PTPRK-220ENST00000531466 ZCWPW2A0A1B0GU75 182 aa3.99□□□□□ -1.77
PTPRK-220ENST00000531466 DUXAA6NLW8 204 aa3.99□□□□□ -1.77
PTPRK-220ENST00000531466 E9PQ18 207 aa3.99□□□□□ -1.77
PTPRK-220ENST00000531466 CLIC2O15247 247 aa3.99□□□□□ -1.77
PTPRK-220ENST00000531466 EIF3DO15371 548 aaKnown RBP eCLIP3.99□□□□□ -1.77
PTPRK-220ENST00000531466 SRSF10O75494 262 aaKnown RBP3.99□□□□□ -1.77
PTPRK-220ENST00000531466 HEXAP06865 529 aa3.99□□□□□ -1.77
PTPRK-220ENST00000531466 VEGFAP15692 232 aaPredicted RBP3.99□□□□□ -1.77
PTPRK-220ENST00000531466 SLC8A3P57103 927 aa3.99□□□□□ -1.77
PTPRK-220ENST00000531466 SORDQ00796 357 aa3.99□□□□□ -1.77
PTPRK-220ENST00000531466 GORABQ5T7V8 394 aa3.99□□□□□ -1.77
PTPRK-220ENST00000531466 ACVR1CQ8NER5 493 aa3.99□□□□□ -1.77
PTPRK-220ENST00000531466 KLHL29Q96CT2 875 aa3.99□□□□□ -1.77
PTPRK-220ENST00000531466 ADPRHL2Q9NX46 363 aa3.99□□□□□ -1.77
PTPRK-220ENST00000531466 JRKLQ9Y4A0 524 aa3.99□□□□□ -1.77
PTPRK-220ENST00000531466 KIAA1210Q9ULL0 1709 aa3.98□□□□□ -1.77
PTPRK-220ENST00000531466 VWA3AA6NCI4 1184 aa3.98□□□□□ -1.77
PTPRK-220ENST00000531466 DCXO43602 365 aa3.98□□□□□ -1.77
PTPRK-220ENST00000531466 AHRP35869 848 aa3.98□□□□□ -1.77
PTPRK-220ENST00000531466 CSNK2A1P68400 391 aaPredicted RBP3.98□□□□□ -1.77
PTPRK-220ENST00000531466 PLIN5Q00G26 463 aa3.98□□□□□ -1.77
PTPRK-220ENST00000531466 TUBB2AQ13885 445 aa3.98□□□□□ -1.77
PTPRK-220ENST00000531466 FFAR4Q5NUL3 377 aa3.98□□□□□ -1.77
PTPRK-220ENST00000531466 TOGARAM2Q6ZUX3 1019 aa3.98□□□□□ -1.77
PTPRK-220ENST00000531466 ADGRG6Q86SQ4 1221 aa3.98□□□□□ -1.77
PTPRK-220ENST00000531466 BMPERQ8N8U9 685 aa3.98□□□□□ -1.77
PTPRK-220ENST00000531466 CSNK2A3Q8NEV1 391 aa3.98□□□□□ -1.77
PTPRK-220ENST00000531466 OR2T6Q8NHC8 308 aa3.98□□□□□ -1.77
PTPRK-220ENST00000531466 GRAMD2BQ96HH9 432 aa3.98□□□□□ -1.77
PTPRK-220ENST00000531466 TRIM51Q9BSJ1 452 aa3.98□□□□□ -1.77
PTPRK-220ENST00000531466 SYT11Q9BT88 431 aa3.98□□□□□ -1.77
PTPRK-220ENST00000531466 TUBB2BQ9BVA1 445 aa3.98□□□□□ -1.77
PTPRK-220ENST00000531466 ZNF700Q9H0M5 742 aa3.98□□□□□ -1.77
PTPRK-220ENST00000531466 BEX4Q9NWD9 120 aaPredicted RBP3.98□□□□□ -1.77
PTPRK-220ENST00000531466 MARCH4Q9P2E8 410 aaPredicted RBP3.98□□□□□ -1.77
PTPRK-220ENST00000531466 ACAD8Q9UKU7 415 aa3.98□□□□□ -1.77
PTPRK-220ENST00000531466 PYGO1Q9Y3Y4 419 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms