RNA–Protein interactions for RNA: ENST00000531158.1

CHMP4A-205, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 4

Gene CHMP4A, Length 563 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-205ENST00000531158 SLC17A4Q9Y2C5 497 aa9.18□□□□□ -0.94
CHMP4A-205ENST00000531158 SIK3Q9Y2K2 1263 aa9.18□□□□□ -0.94
CHMP4A-205ENST00000531158 CACNA1DQ01668 2161 aa9.17□□□□□ -0.94
CHMP4A-205ENST00000531158 LOC101059948A0A1B0GTJ6 334 aa9.17□□□□□ -0.94
CHMP4A-205ENST00000531158 NPIPB15A6NHN6 443 aaPredicted RBP9.17□□□□□ -0.94
CHMP4A-205ENST00000531158 K7EM74 188 aa9.17□□□□□ -0.94
CHMP4A-205ENST00000531158 ATP8B1O43520 1251 aa9.17□□□□□ -0.94
CHMP4A-205ENST00000531158 PALMO75781 387 aa9.17□□□□□ -0.94
CHMP4A-205ENST00000531158 URI1O94763 535 aaPredicted RBP9.17□□□□□ -0.94
CHMP4A-205ENST00000531158 KELP23276 732 aa9.17□□□□□ -0.94
CHMP4A-205ENST00000531158 OAS2P29728 719 aaKnown RBP9.17□□□□□ -0.94
CHMP4A-205ENST00000531158 NSFP46459 744 aaKnown RBP9.17□□□□□ -0.94
CHMP4A-205ENST00000531158 GNPDA1P46926 289 aa9.17□□□□□ -0.94
CHMP4A-205ENST00000531158 TPI1P60174 286 aa9.17□□□□□ -0.94
CHMP4A-205ENST00000531158 GNG11P61952 73 aa9.17□□□□□ -0.94
CHMP4A-205ENST00000531158 CDK3Q00526 305 aa9.17□□□□□ -0.94
CHMP4A-205ENST00000531158 GABPB1Q06547 395 aaPredicted RBP9.17□□□□□ -0.94
CHMP4A-205ENST00000531158 BCL2L1Q07817 233 aa9.17□□□□□ -0.94
CHMP4A-205ENST00000531158 CLPPQ16740 277 aaPredicted RBP9.17□□□□□ -0.94
CHMP4A-205ENST00000531158 FIGNQ5HY92 759 aa9.17□□□□□ -0.94
CHMP4A-205ENST00000531158 CFAP58Q5T655 872 aa9.17□□□□□ -0.94
CHMP4A-205ENST00000531158 TMEM164Q5U3C3 297 aa9.17□□□□□ -0.94
CHMP4A-205ENST00000531158 RAD9BQ6WBX8 426 aa9.17□□□□□ -0.94
CHMP4A-205ENST00000531158 TRIM72Q6ZMU5 477 aa9.17□□□□□ -0.94
CHMP4A-205ENST00000531158 TSPAN33Q86UF1 283 aa9.17□□□□□ -0.94
CHMP4A-205ENST00000531158 UNC5BQ8IZJ1 945 aa9.17□□□□□ -0.94
CHMP4A-205ENST00000531158 CACNA2D3Q8IZS8 1091 aa9.17□□□□□ -0.94
CHMP4A-205ENST00000531158 UBXN4Q92575 508 aa9.17□□□□□ -0.94
CHMP4A-205ENST00000531158 NUS1Q96E22 293 aa9.17□□□□□ -0.94
CHMP4A-205ENST00000531158 DTD2Q96FN9 168 aa9.17□□□□□ -0.94
CHMP4A-205ENST00000531158 SCARF2Q96GP6 870 aaPredicted RBP9.17□□□□□ -0.94
CHMP4A-205ENST00000531158 PSKH2Q96QS6 385 aa9.17□□□□□ -0.94
CHMP4A-205ENST00000531158 KCTD15Q96SI1 283 aaPredicted RBP9.17□□□□□ -0.94
CHMP4A-205ENST00000531158 DNAJC7Q99615 494 aa9.17□□□□□ -0.94
CHMP4A-205ENST00000531158 CNPY3Q9BT09 278 aa9.17□□□□□ -0.94
CHMP4A-205ENST00000531158 CDH19Q9H159 772 aa9.17□□□□□ -0.94
CHMP4A-205ENST00000531158 ZNF768Q9H5H4 540 aaKnown RBP9.17□□□□□ -0.94
CHMP4A-205ENST00000531158 CATSPERBQ9H7T0 1116 aa9.17□□□□□ -0.94
CHMP4A-205ENST00000531158 APMAPQ9HDC9 416 aa9.17□□□□□ -0.94
CHMP4A-205ENST00000531158 TRNAU1APQ9NX07 287 aaKnown RBP9.17□□□□□ -0.94
CHMP4A-205ENST00000531158 FAM53CQ9NYF3 392 aa9.17□□□□□ -0.94
CHMP4A-205ENST00000531158 PDP2Q9P2J9 529 aa9.17□□□□□ -0.94
CHMP4A-205ENST00000531158 TUBD1Q9UJT1 453 aa9.17□□□□□ -0.94
CHMP4A-205ENST00000531158 PCDHGC4Q9Y5F7 938 aa9.17□□□□□ -0.94
CHMP4A-205ENST00000531158 CELSR2Q9HCU4 2923 aa9.17□□□□□ -0.94
CHMP4A-205ENST00000531158 A0A1W2PQJ5 194 aa9.16□□□□□ -0.94
CHMP4A-205ENST00000531158 RHPN2P1A8MT19 583 aa9.16□□□□□ -0.94
CHMP4A-205ENST00000531158 PES1O00541 588 aaKnown RBP9.16□□□□□ -0.94
CHMP4A-205ENST00000531158 HTRA2O43464 458 aaPredicted RBP9.16□□□□□ -0.94
CHMP4A-205ENST00000531158 RAD1O60671 282 aa9.16□□□□□ -0.94
CHMP4A-205ENST00000531158 HEXIM1O94992 359 aaKnown RBP9.16□□□□□ -0.94
CHMP4A-205ENST00000531158 CALB1P05937 261 aa9.16□□□□□ -0.94
CHMP4A-205ENST00000531158 ERCC2P18074 760 aa9.16□□□□□ -0.94
CHMP4A-205ENST00000531158 TNFRSF8P28908 595 aa9.16□□□□□ -0.94
CHMP4A-205ENST00000531158 ADCY8P40145 1251 aa9.16□□□□□ -0.94
CHMP4A-205ENST00000531158 GPR3P46089 330 aa9.16□□□□□ -0.94
CHMP4A-205ENST00000531158 ATP1A2P50993 1020 aa9.16□□□□□ -0.94
CHMP4A-205ENST00000531158 SCNN1BP51168 640 aa9.16□□□□□ -0.94
CHMP4A-205ENST00000531158 NSUN2Q08J23 767 aaKnown RBP eCLIP9.16□□□□□ -0.94
CHMP4A-205ENST00000531158 ILF3Q12906 894 aaKnown RBP eCLIP9.16□□□□□ -0.94
CHMP4A-205ENST00000531158 TRAF2Q12933 501 aa9.16□□□□□ -0.94
CHMP4A-205ENST00000531158 TRA2AQ13595 282 aaKnown RBP eCLIP9.16□□□□□ -0.94
CHMP4A-205ENST00000531158 IHHQ14623 411 aa9.16□□□□□ -0.94
CHMP4A-205ENST00000531158 NAA30Q147X3 362 aaPredicted RBP9.16□□□□□ -0.94
CHMP4A-205ENST00000531158 TSR1Q2NL82 804 aaKnown RBP9.16□□□□□ -0.94
CHMP4A-205ENST00000531158 DENND2CQ68D51 928 aa9.16□□□□□ -0.94
CHMP4A-205ENST00000531158 DNAJC24Q6P3W2 148 aa9.16□□□□□ -0.94
CHMP4A-205ENST00000531158 RFX8Q6ZV50 586 aa9.16□□□□□ -0.94
CHMP4A-205ENST00000531158 Q6ZVL8 140 aa9.16□□□□□ -0.94
CHMP4A-205ENST00000531158 TRIM74Q86UV6 250 aa9.16□□□□□ -0.94
CHMP4A-205ENST00000531158 KRT222Q8N1A0 295 aa9.16□□□□□ -0.94
CHMP4A-205ENST00000531158 IL22RA1Q8N6P7 574 aa9.16□□□□□ -0.94
CHMP4A-205ENST00000531158 CEP112Q8N8E3 955 aa9.16□□□□□ -0.94
CHMP4A-205ENST00000531158 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.16□□□□□ -0.94
CHMP4A-205ENST00000531158 AGBL5Q8NDL9 886 aa9.16□□□□□ -0.94
CHMP4A-205ENST00000531158 SLC37A2Q8TED4 501 aa9.16□□□□□ -0.94
CHMP4A-205ENST00000531158 RTP4Q96DX8 246 aa9.16□□□□□ -0.94
CHMP4A-205ENST00000531158 RNF31Q96EP0 1072 aa9.16□□□□□ -0.94
CHMP4A-205ENST00000531158 ABHD17AQ96GS6 310 aa9.16□□□□□ -0.94
CHMP4A-205ENST00000531158 SLC45A3Q96JT2 553 aa9.16□□□□□ -0.94
CHMP4A-205ENST00000531158 WDR24Q96S15 920 aa9.16□□□□□ -0.94
CHMP4A-205ENST00000531158 AGAP2Q99490 1192 aa9.16□□□□□ -0.94
CHMP4A-205ENST00000531158 CTRCQ99895 268 aa9.16□□□□□ -0.94
CHMP4A-205ENST00000531158 DESI2Q9BSY9 194 aa9.16□□□□□ -0.94
CHMP4A-205ENST00000531158 SYT11Q9BT88 431 aa9.16□□□□□ -0.94
CHMP4A-205ENST00000531158 SNRNP25Q9BV90 132 aaKnown RBP9.16□□□□□ -0.94
CHMP4A-205ENST00000531158 CINPQ9BW66 212 aaPredicted RBP9.16□□□□□ -0.94
CHMP4A-205ENST00000531158 GSDMCQ9BYG8 508 aa9.16□□□□□ -0.94
CHMP4A-205ENST00000531158 TRIM7Q9C029 511 aa9.16□□□□□ -0.94
CHMP4A-205ENST00000531158 SLC39A1Q9NY26 324 aa9.16□□□□□ -0.94
CHMP4A-205ENST00000531158 TAS2R14Q9NYV8 317 aa9.16□□□□□ -0.94
CHMP4A-205ENST00000531158 AP4E1Q9UPM8 1137 aa9.16□□□□□ -0.94
CHMP4A-205ENST00000531158 PLAAQ9Y263 795 aa9.16□□□□□ -0.94
CHMP4A-205ENST00000531158 CSMD1Q96PZ7 3565 aa9.16□□□□□ -0.94
CHMP4A-205ENST00000531158 ARHGAP42A6NI28 874 aa9.15□□□□□ -0.94
CHMP4A-205ENST00000531158 EFCAB7A8K855 629 aa9.15□□□□□ -0.94
CHMP4A-205ENST00000531158 B4E171 279 aa9.15□□□□□ -0.94
CHMP4A-205ENST00000531158 DFFAO00273 331 aa9.15□□□□□ -0.94
CHMP4A-205ENST00000531158 EEF2KO00418 725 aaKnown RBP9.15□□□□□ -0.94
CHMP4A-205ENST00000531158 ATMINO43313 823 aaPredicted RBP9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms