RNA–Protein interactions for RNA: ENST00000530384.5

CCS-205, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5

Gene CCS, Length 1,196 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-205ENST00000530384 WDR24Q96S15 920 aa16.98■□□□□ 0.31
CCS-205ENST00000530384 AGAP2Q99490 1192 aa16.98■□□□□ 0.31
CCS-205ENST00000530384 FAM118BQ9BPY3 351 aa16.98■□□□□ 0.31
CCS-205ENST00000530384 TMEM168Q9H0V1 697 aa16.98■□□□□ 0.31
CCS-205ENST00000530384 TRABDQ9H4I3 376 aa16.98■□□□□ 0.31
CCS-205ENST00000530384 LZTFL1Q9NQ48 299 aa16.98■□□□□ 0.31
CCS-205ENST00000530384 TRNAU1APQ9NX07 287 aaKnown RBP16.98■□□□□ 0.31
CCS-205ENST00000530384 HACD3Q9P035 362 aa16.98■□□□□ 0.31
CCS-205ENST00000530384 NFKBIL1Q9UBC1 381 aaPredicted RBP16.98■□□□□ 0.31
CCS-205ENST00000530384 ASXL3Q9C0F0 2248 aa16.98■□□□□ 0.31
CCS-205ENST00000530384 MYLKQ15746 1914 aa16.98■□□□□ 0.31
CCS-205ENST00000530384 ARHGEF17Q96PE2 2063 aaPredicted RBP16.97■□□□□ 0.31
CCS-205ENST00000530384 FAM149AA5PLN7 773 aa16.97■□□□□ 0.31
CCS-205ENST00000530384 F5H423 210 aaPredicted RBP16.97■□□□□ 0.31
CCS-205ENST00000530384 FGF1P05230 155 aa16.97■□□□□ 0.31
CCS-205ENST00000530384 INSM1Q01101 510 aaPredicted RBP16.97■□□□□ 0.31
CCS-205ENST00000530384 ILF3Q12906 894 aaKnown RBP eCLIP16.97■□□□□ 0.31
CCS-205ENST00000530384 PRPSAP1Q14558 356 aa16.97■□□□□ 0.31
CCS-205ENST00000530384 TCEA2Q15560 299 aa16.97■□□□□ 0.31
CCS-205ENST00000530384 SLC1A5Q15758 541 aa16.97■□□□□ 0.31
CCS-205ENST00000530384 GUSBP11Q6P575 273 aa16.97■□□□□ 0.31
CCS-205ENST00000530384 DOK6Q6PKX4 331 aa16.97■□□□□ 0.31
CCS-205ENST00000530384 EFL1Q7Z2Z2 1120 aaKnown RBP16.97■□□□□ 0.31
CCS-205ENST00000530384 GPBAR1Q8TDU6 330 aa16.97■□□□□ 0.31
CCS-205ENST00000530384 EID2BQ96D98 161 aa16.97■□□□□ 0.31
CCS-205ENST00000530384 SCARF2Q96GP6 870 aaPredicted RBP16.97■□□□□ 0.31
CCS-205ENST00000530384 COX14Q96I36 57 aa16.97■□□□□ 0.31
CCS-205ENST00000530384 SPATA13Q96N96 652 aa16.97■□□□□ 0.31
CCS-205ENST00000530384 ZSCAN5AQ9BUG6 496 aa16.97■□□□□ 0.31
CCS-205ENST00000530384 GSDMCQ9BYG8 508 aa16.97■□□□□ 0.31
CCS-205ENST00000530384 ABCG4Q9H172 646 aa16.97■□□□□ 0.31
CCS-205ENST00000530384 VPS18Q9P253 973 aa16.97■□□□□ 0.31
CCS-205ENST00000530384 GULP1Q9UBP9 304 aa16.97■□□□□ 0.31
CCS-205ENST00000530384 PADI4Q9UM07 663 aa16.97■□□□□ 0.31
CCS-205ENST00000530384 SUFUQ9UMX1 484 aa16.97■□□□□ 0.31
CCS-205ENST00000530384 AAR2Q9Y312 384 aaKnown RBP16.97■□□□□ 0.31
CCS-205ENST00000530384 RP1P56715 2156 aa16.96■□□□□ 0.31
CCS-205ENST00000530384 INPP4BO15327 924 aa16.96■□□□□ 0.31
CCS-205ENST00000530384 OPA1O60313 960 aa16.96■□□□□ 0.31
CCS-205ENST00000530384 SLC4A1P02730 911 aa16.96■□□□□ 0.31
CCS-205ENST00000530384 HMGCLP35914 325 aa16.96■□□□□ 0.31
CCS-205ENST00000530384 GNPDA1P46926 289 aa16.96■□□□□ 0.31
CCS-205ENST00000530384 PEX6Q13608 980 aa16.96■□□□□ 0.31
CCS-205ENST00000530384 RPS6KA1Q15418 735 aa16.96■□□□□ 0.31
CCS-205ENST00000530384 SIRPB2Q5JXA9 342 aa16.96■□□□□ 0.31
CCS-205ENST00000530384 MEI1Q5TIA1 1274 aa16.96■□□□□ 0.31
CCS-205ENST00000530384 PDPK2PQ6A1A2 396 aa16.96■□□□□ 0.31
CCS-205ENST00000530384 SLC25A41Q8N5S1 370 aa16.96■□□□□ 0.31
CCS-205ENST00000530384 PDCD7Q8N8D1 485 aaKnown RBP16.96■□□□□ 0.31
CCS-205ENST00000530384 KDF1Q8NAX2 398 aaPredicted RBP16.96■□□□□ 0.31
CCS-205ENST00000530384 FAM46DQ8NEK8 389 aa16.96■□□□□ 0.31
CCS-205ENST00000530384 OR6C4Q8NGE1 309 aa16.96■□□□□ 0.31
CCS-205ENST00000530384 MAPK15Q8TD08 544 aa16.96■□□□□ 0.31
CCS-205ENST00000530384 LRRC45Q96CN5 670 aa16.96■□□□□ 0.31
CCS-205ENST00000530384 SPATA16Q9BXB7 569 aa16.96■□□□□ 0.31
CCS-205ENST00000530384 SIRPGQ9P1W8 387 aa16.96■□□□□ 0.31
CCS-205ENST00000530384 CLCA2Q9UQC9 943 aa16.96■□□□□ 0.31
CCS-205ENST00000530384 TMEM98Q9Y2Y6 226 aa16.96■□□□□ 0.31
CCS-205ENST00000530384 SPO11Q9Y5K1 396 aa16.96■□□□□ 0.31
CCS-205ENST00000530384 SCN8AQ9UQD0 1980 aa16.95■□□□□ 0.3
CCS-205ENST00000530384 C5orf60A6NFR6 353 aa16.95■□□□□ 0.3
CCS-205ENST00000530384 FADS2P1A8MWK0 482 aa16.95■□□□□ 0.3
CCS-205ENST00000530384 ASMTLO95671 621 aa16.95■□□□□ 0.3
CCS-205ENST00000530384 MT-CO3P00414 261 aa16.95■□□□□ 0.3
CCS-205ENST00000530384 FUCA1P04066 466 aa16.95■□□□□ 0.3
CCS-205ENST00000530384 PSMB4P28070 264 aa16.95■□□□□ 0.3
CCS-205ENST00000530384 CHRNA4P43681 627 aa16.95■□□□□ 0.3
CCS-205ENST00000530384 POLD2P49005 469 aa16.95■□□□□ 0.3
CCS-205ENST00000530384 CLDN6P56747 220 aa16.95■□□□□ 0.3
CCS-205ENST00000530384 CAMK2BQ13554 666 aa16.95■□□□□ 0.3
CCS-205ENST00000530384 ST3GAL2Q16842 350 aa16.95■□□□□ 0.3
CCS-205ENST00000530384 ZNF569Q5MCW4 686 aa16.95■□□□□ 0.3
CCS-205ENST00000530384 ZDHHC20Q5W0Z9 365 aa16.95■□□□□ 0.3
CCS-205ENST00000530384 OGFOD3Q6PK18 319 aa16.95■□□□□ 0.3
CCS-205ENST00000530384 TRIM74Q86UV6 250 aa16.95■□□□□ 0.3
CCS-205ENST00000530384 TRAM1L1Q8N609 369 aa16.95■□□□□ 0.3
CCS-205ENST00000530384 KYQ8NBH2 561 aa16.95■□□□□ 0.3
CCS-205ENST00000530384 GPR26Q8NDV2 337 aa16.95■□□□□ 0.3
CCS-205ENST00000530384 GPR156Q8NFN8 814 aa16.95■□□□□ 0.3
CCS-205ENST00000530384 TRIM58Q8NG06 486 aa16.95■□□□□ 0.3
CCS-205ENST00000530384 CCL4L1Q8NHW4 92 aa16.95■□□□□ 0.3
CCS-205ENST00000530384 WDR48Q8TAF3 677 aa16.95■□□□□ 0.3
CCS-205ENST00000530384 SLC35B2Q8TB61 432 aa16.95■□□□□ 0.3
CCS-205ENST00000530384 CCDC110Q8TBZ0 833 aa16.95■□□□□ 0.3
CCS-205ENST00000530384 PLEKHG4BQ96PX9 1271 aa16.95■□□□□ 0.3
CCS-205ENST00000530384 OR2M4Q96R27 311 aa16.95■□□□□ 0.3
CCS-205ENST00000530384 FRMD8P1Q9BZ68 369 aaPredicted RBP16.95■□□□□ 0.3
CCS-205ENST00000530384 CARD9Q9H257 536 aa16.95■□□□□ 0.3
CCS-205ENST00000530384 DPEP2Q9H4A9 486 aa16.95■□□□□ 0.3
CCS-205ENST00000530384 SUDS3Q9H7L9 328 aaPredicted RBP16.95■□□□□ 0.3
CCS-205ENST00000530384 CNOT6Q9ULM6 557 aaKnown RBP16.95■□□□□ 0.3
CCS-205ENST00000530384 BPIP17213 487 aa16.94■□□□□ 0.3
CCS-205ENST00000530384 ADCY8P40145 1251 aa16.94■□□□□ 0.3
CCS-205ENST00000530384 TARDBPQ13148 414 aaKnown RBP eCLIP16.94■□□□□ 0.33e-6■■■■□ 26.3
CCS-205ENST00000530384 LRP8Q14114 963 aa16.94■□□□□ 0.3
CCS-205ENST00000530384 PYCR3Q53H96 274 aa16.94■□□□□ 0.3
CCS-205ENST00000530384 CDCP2Q5VXM1 449 aa16.94■□□□□ 0.3
CCS-205ENST00000530384 ALS2CLQ60I27 953 aa16.94■□□□□ 0.3
CCS-205ENST00000530384 ARHGEF18Q6ZSZ5 1173 aa16.94■□□□□ 0.3
CCS-205ENST00000530384 GLT6D1Q7Z4J2 308 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms