RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 GDPD4Q6W3E5 623 aa14.37□□□□□ -0.11
TTC39A-216ENST00000530004 LYSMD3Q7Z3D4 306 aa14.37□□□□□ -0.11
TTC39A-216ENST00000530004 LDB1Q86U70 411 aaPredicted RBP14.37□□□□□ -0.11
TTC39A-216ENST00000530004 PNPLA1Q8N8W4 532 aa14.37□□□□□ -0.11
TTC39A-216ENST00000530004 ZNF641Q96N77 438 aaPredicted RBP14.37□□□□□ -0.11
TTC39A-216ENST00000530004 OSBPL1AQ9BXW6 950 aa14.37□□□□□ -0.11
TTC39A-216ENST00000530004 BPIFA1Q9NP55 256 aa14.37□□□□□ -0.11
TTC39A-216ENST00000530004 CATSPERZQ9NTU4 200 aa14.37□□□□□ -0.11
TTC39A-216ENST00000530004 SLC39A10Q9ULF5 831 aa14.37□□□□□ -0.11
TTC39A-216ENST00000530004 GRID1Q9ULK0 1009 aa14.37□□□□□ -0.11
TTC39A-216ENST00000530004 PHTF1Q9UMS5 762 aa14.37□□□□□ -0.11
TTC39A-216ENST00000530004 PLLPQ9Y342 182 aa14.37□□□□□ -0.11
TTC39A-216ENST00000530004 CKAP5Q14008 2032 aa14.36□□□□□ -0.11
TTC39A-216ENST00000530004 FAM95CA0A1B0GW59 222 aa14.36□□□□□ -0.11
TTC39A-216ENST00000530004 C1QTNF3-AMACRE9PGA6 284 aa14.36□□□□□ -0.11
TTC39A-216ENST00000530004 KPNA3O00505 521 aaPredicted RBP14.36□□□□□ -0.11
TTC39A-216ENST00000530004 GABRG2P18507 467 aa14.36□□□□□ -0.11
TTC39A-216ENST00000530004 SAT1P21673 171 aa14.36□□□□□ -0.11
TTC39A-216ENST00000530004 LEPRP48357 1165 aaKnown RBP14.36□□□□□ -0.11
TTC39A-216ENST00000530004 RPS14P62263 151 aaKnown RBP14.36□□□□□ -0.11
TTC39A-216ENST00000530004 USP10Q14694 798 aaKnown RBP14.36□□□□□ -0.11
TTC39A-216ENST00000530004 CST6Q15828 149 aa14.36□□□□□ -0.11
TTC39A-216ENST00000530004 ZNF789Q5FWF6 425 aa14.36□□□□□ -0.11
TTC39A-216ENST00000530004 ZNF776Q68DI1 518 aaPredicted RBP14.36□□□□□ -0.11
TTC39A-216ENST00000530004 GALNT7Q86SF2 657 aa14.36□□□□□ -0.11
TTC39A-216ENST00000530004 SLC41A1Q8IVJ1 513 aa14.36□□□□□ -0.11
TTC39A-216ENST00000530004 FBXL6Q8N531 539 aa14.36□□□□□ -0.11
TTC39A-216ENST00000530004 TSTD1Q8NFU3 115 aa14.36□□□□□ -0.11
TTC39A-216ENST00000530004 GPR150Q8NGU9 434 aa14.36□□□□□ -0.11
TTC39A-216ENST00000530004 BCAS4Q8TDM0 211 aa14.36□□□□□ -0.11
TTC39A-216ENST00000530004 CHMP6Q96FZ7 201 aa14.36□□□□□ -0.11
TTC39A-216ENST00000530004 MRGPRX1Q96LB2 322 aa14.36□□□□□ -0.11
TTC39A-216ENST00000530004 MAGEB18Q96M61 343 aa14.36□□□□□ -0.11
TTC39A-216ENST00000530004 KLHL32Q96NJ5 620 aa14.36□□□□□ -0.11
TTC39A-216ENST00000530004 SLC6A17Q9H1V8 727 aa14.36□□□□□ -0.11
TTC39A-216ENST00000530004 VPS11Q9H270 941 aa14.36□□□□□ -0.11
TTC39A-216ENST00000530004 FKBPLQ9UIM3 349 aa14.36□□□□□ -0.11
TTC39A-216ENST00000530004 PKP3Q9Y446 797 aa14.36□□□□□ -0.11
TTC39A-216ENST00000530004 A0A096LPK6 155 aa14.35□□□□□ -0.11
TTC39A-216ENST00000530004 C1orf232A0A0U1RR37 186 aa14.35□□□□□ -0.11
TTC39A-216ENST00000530004 CAPN8A6NHC0 703 aa14.35□□□□□ -0.11
TTC39A-216ENST00000530004 GLRA3O75311 464 aa14.35□□□□□ -0.11
TTC39A-216ENST00000530004 MPOP05164 745 aa14.35□□□□□ -0.11
TTC39A-216ENST00000530004 NDUFV2P19404 249 aa14.35□□□□□ -0.11
TTC39A-216ENST00000530004 ETV4P43268 484 aa14.35□□□□□ -0.11
TTC39A-216ENST00000530004 CXCL12P48061 93 aa14.35□□□□□ -0.11
TTC39A-216ENST00000530004 PSMD8P48556 350 aa14.35□□□□□ -0.11
TTC39A-216ENST00000530004 METAP1P53582 386 aa14.35□□□□□ -0.11
TTC39A-216ENST00000530004 SEMA3AQ14563 771 aa14.35□□□□□ -0.11
TTC39A-216ENST00000530004 POM121L1PQ3SYA9 428 aa14.35□□□□□ -0.11
TTC39A-216ENST00000530004 FASTKD1Q53R41 847 aaKnown RBP14.35□□□□□ -0.11
TTC39A-216ENST00000530004 ZNF805Q5CZA5 627 aa14.35□□□□□ -0.11
TTC39A-216ENST00000530004 FAM46CQ5VWP2 391 aa14.35□□□□□ -0.11
TTC39A-216ENST00000530004 CACUL1Q86Y37 369 aa14.35□□□□□ -0.11
TTC39A-216ENST00000530004 TMEM105Q8N8V8 129 aa14.35□□□□□ -0.11
TTC39A-216ENST00000530004 GPATCH11Q8N954 259 aa14.35□□□□□ -0.11
TTC39A-216ENST00000530004 EID2BQ96D98 161 aa14.35□□□□□ -0.11
TTC39A-216ENST00000530004 ELMO2Q96JJ3 720 aa14.35□□□□□ -0.11
TTC39A-216ENST00000530004 CABS1Q96KC9 395 aa14.35□□□□□ -0.11
TTC39A-216ENST00000530004 ZNF317Q96PQ6 595 aaPredicted RBP14.35□□□□□ -0.11
TTC39A-216ENST00000530004 HHIPQ96QV1 700 aa14.35□□□□□ -0.11
TTC39A-216ENST00000530004 FAM107BQ9H098 131 aa14.35□□□□□ -0.11
TTC39A-216ENST00000530004 ZFYVE1Q9HBF4 777 aa14.35□□□□□ -0.11
TTC39A-216ENST00000530004 IL17CQ9P0M4 197 aa14.35□□□□□ -0.11
TTC39A-216ENST00000530004 DCDC2Q9UHG0 476 aa14.35□□□□□ -0.11
TTC39A-216ENST00000530004 BDP1A6H8Y1 2624 aa14.35□□□□□ -0.11
TTC39A-216ENST00000530004 A0A1W2PQ67 120 aa14.34□□□□□ -0.11
TTC39A-216ENST00000530004 WDR91A4D1P6 747 aa14.34□□□□□ -0.11
TTC39A-216ENST00000530004 TCP11X1B4DZS4 312 aa14.34□□□□□ -0.11
TTC39A-216ENST00000530004 S1PR4O95977 384 aa14.34□□□□□ -0.11
TTC39A-216ENST00000530004 ADH1BP00325 375 aa14.34□□□□□ -0.11
TTC39A-216ENST00000530004 C2P06681 752 aa14.34□□□□□ -0.11
TTC39A-216ENST00000530004 VIMP08670 466 aaKnown RBP14.34□□□□□ -0.11
TTC39A-216ENST00000530004 PRSS56P0CW18 603 aa14.34□□□□□ -0.11
TTC39A-216ENST00000530004 OGNP20774 298 aaKnown RBP14.34□□□□□ -0.11
TTC39A-216ENST00000530004 MC4RP32245 332 aa14.34□□□□□ -0.11
TTC39A-216ENST00000530004 HMGCLP35914 325 aa14.34□□□□□ -0.11
TTC39A-216ENST00000530004 GMPRP36959 345 aa14.34□□□□□ -0.11
TTC39A-216ENST00000530004 POLD2P49005 469 aa14.34□□□□□ -0.11
TTC39A-216ENST00000530004 CCR3P51677 355 aa14.34□□□□□ -0.11
TTC39A-216ENST00000530004 ZBTB16Q05516 673 aa14.34□□□□□ -0.11
TTC39A-216ENST00000530004 RAPH1Q70E73 1250 aa14.34□□□□□ -0.11
TTC39A-216ENST00000530004 USP45Q70EL2 814 aa14.34□□□□□ -0.11
TTC39A-216ENST00000530004 SDCCAG8Q86SQ7 713 aaPredicted RBP14.34□□□□□ -0.11
TTC39A-216ENST00000530004 HMGB4Q8WW32 186 aa14.34□□□□□ -0.11
TTC39A-216ENST00000530004 SIPA1Q96FS4 1042 aa14.34□□□□□ -0.11
TTC39A-216ENST00000530004 PPP1R16AQ96I34 528 aa14.34□□□□□ -0.11
TTC39A-216ENST00000530004 CCT8L2Q96SF2 557 aa14.34□□□□□ -0.11
TTC39A-216ENST00000530004 DKK3Q9UBP4 350 aa14.34□□□□□ -0.11
TTC39A-216ENST00000530004 FNDC3AQ9Y2H6 1198 aaKnown RBP14.34□□□□□ -0.11
TTC39A-216ENST00000530004 TSPAN11A1L157 253 aa14.34□□□□□ -0.11
TTC39A-216ENST00000530004 NPIPB15A6NHN6 443 aaPredicted RBP14.34□□□□□ -0.11
TTC39A-216ENST00000530004 A8MX80 341 aa14.34□□□□□ -0.11
TTC39A-216ENST00000530004 H7C0S8 307 aa14.34□□□□□ -0.11
TTC39A-216ENST00000530004 MID1O15344 667 aa14.34□□□□□ -0.11
TTC39A-216ENST00000530004 PHGDHO43175 533 aaKnown RBP14.34□□□□□ -0.11
TTC39A-216ENST00000530004 CLDN7O95471 211 aa14.34□□□□□ -0.11
TTC39A-216ENST00000530004 DNTTP04053 509 aa14.34□□□□□ -0.11
TTC39A-216ENST00000530004 DHRS4L1P0CG22 281 aa14.34□□□□□ -0.11
TTC39A-216ENST00000530004 C5AR1P21730 350 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms