RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 GPT2Q8TD30 523 aa4.64□□□□□ -1.67
C11orf88-204ENST00000529661 IGSF8Q969P0 613 aa4.64□□□□□ -1.67
C11orf88-204ENST00000529661 ELMOD3Q96FG2 381 aa4.64□□□□□ -1.67
C11orf88-204ENST00000529661 ZNF570Q96NI8 536 aa4.64□□□□□ -1.67
C11orf88-204ENST00000529661 CTAGE1Q96RT6 745 aa4.64□□□□□ -1.67
C11orf88-204ENST00000529661 CYSLTR2Q9NS75 346 aa4.64□□□□□ -1.67
C11orf88-204ENST00000529661 WSB2Q9NYS7 404 aaPredicted RBP4.64□□□□□ -1.67
C11orf88-204ENST00000529661 GIMAP2Q9UG22 337 aa4.64□□□□□ -1.67
C11orf88-204ENST00000529661 MAU2Q9Y6X3 613 aa4.64□□□□□ -1.67
C11orf88-204ENST00000529661 TMEM202A6NGA9 273 aa4.63□□□□□ -1.67
C11orf88-204ENST00000529661 KDM4EB2RXH2 506 aaPredicted RBP4.63□□□□□ -1.67
C11orf88-204ENST00000529661 CTDSP2O14595 271 aa4.63□□□□□ -1.67
C11orf88-204ENST00000529661 PAPSS1O43252 624 aaPredicted RBP4.63□□□□□ -1.67
C11orf88-204ENST00000529661 ADAM20O43506 726 aa4.63□□□□□ -1.67
C11orf88-204ENST00000529661 ITM2AO43736 263 aa4.63□□□□□ -1.67
C11orf88-204ENST00000529661 DKC1O60832 514 aaKnown RBP eCLIP4.63□□□□□ -1.67
C11orf88-204ENST00000529661 NDUFB4O95168 129 aa4.63□□□□□ -1.67
C11orf88-204ENST00000529661 SRPRAP08240 638 aaKnown RBP4.63□□□□□ -1.67
C11orf88-204ENST00000529661 PON1P27169 355 aa4.63□□□□□ -1.67
C11orf88-204ENST00000529661 ACADLP28330 430 aa4.63□□□□□ -1.67
C11orf88-204ENST00000529661 SLC15A1P46059 708 aa4.63□□□□□ -1.67
C11orf88-204ENST00000529661 NUDT6P53370 316 aa4.63□□□□□ -1.67
C11orf88-204ENST00000529661 RRP1P56182 461 aaKnown RBP4.63□□□□□ -1.67
C11orf88-204ENST00000529661 DSCR9P59020 149 aa4.63□□□□□ -1.67
C11orf88-204ENST00000529661 ST3GAL1Q11201 340 aa4.63□□□□□ -1.67
C11orf88-204ENST00000529661 BMP2KLQ5H9B9 411 aa4.63□□□□□ -1.67
C11orf88-204ENST00000529661 ANKRD54Q6NXT1 300 aa4.63□□□□□ -1.67
C11orf88-204ENST00000529661 SLC30A6Q6NXT4 461 aa4.63□□□□□ -1.67
C11orf88-204ENST00000529661 FJX1Q86VR8 437 aa4.63□□□□□ -1.67
C11orf88-204ENST00000529661 MB21D2Q8IYB1 491 aaPredicted RBP4.63□□□□□ -1.67
C11orf88-204ENST00000529661 CCDC13Q8IYE1 715 aa4.63□□□□□ -1.67
C11orf88-204ENST00000529661 IL17RCQ8NAC3 791 aa4.63□□□□□ -1.67
C11orf88-204ENST00000529661 CCDC191Q8NCU4 936 aa4.63□□□□□ -1.67
C11orf88-204ENST00000529661 AGBL3Q8NEM8 1001 aa4.63□□□□□ -1.67
C11orf88-204ENST00000529661 FIZ1Q96SL8 496 aa4.63□□□□□ -1.67
C11orf88-204ENST00000529661 C1QTNF1Q9BXJ1 281 aa4.63□□□□□ -1.67
C11orf88-204ENST00000529661 TM6SF1Q9BZW5 370 aa4.63□□□□□ -1.67
C11orf88-204ENST00000529661 PLK3Q9H4B4 646 aa4.63□□□□□ -1.67
C11orf88-204ENST00000529661 ESRP2Q9H6T0 727 aaKnown RBP4.63□□□□□ -1.67
C11orf88-204ENST00000529661 MRPL15Q9P015 296 aaKnown RBP4.63□□□□□ -1.67
C11orf88-204ENST00000529661 EXO1Q9UQ84 846 aaKnown RBP4.63□□□□□ -1.67
C11orf88-204ENST00000529661 ERVK-11Q9UQG0 969 aa4.63□□□□□ -1.67
C11orf88-204ENST00000529661 CMAHPQ9Y471 501 aa4.63□□□□□ -1.67
C11orf88-204ENST00000529661 STON1Q9Y6Q2 735 aa4.63□□□□□ -1.67
C11orf88-204ENST00000529661 ZNF644Q9H582 1327 aaPredicted RBP4.63□□□□□ -1.67
C11orf88-204ENST00000529661 A8MV72 311 aaPredicted RBP4.62□□□□□ -1.67
C11orf88-204ENST00000529661 AKR1B15C9JRZ8 316 aaPredicted RBP4.62□□□□□ -1.67
C11orf88-204ENST00000529661 ADAMDEC1O15204 470 aa4.62□□□□□ -1.67
C11orf88-204ENST00000529661 TPPPO94811 219 aa4.62□□□□□ -1.67
C11orf88-204ENST00000529661 FTCDO95954 541 aa4.62□□□□□ -1.67
C11orf88-204ENST00000529661 GLUD1P00367 558 aa4.62□□□□□ -1.67
C11orf88-204ENST00000529661 FGF3P11487 239 aaPredicted RBP4.62□□□□□ -1.67
C11orf88-204ENST00000529661 NAGAP17050 411 aa4.62□□□□□ -1.67
C11orf88-204ENST00000529661 GPTP24298 496 aa4.62□□□□□ -1.67
C11orf88-204ENST00000529661 NRIP1P48552 1158 aa4.62□□□□□ -1.67
C11orf88-204ENST00000529661 GLUD2P49448 558 aa4.62□□□□□ -1.67
C11orf88-204ENST00000529661 METAP2P50579 478 aaKnown RBP eCLIP4.62□□□□□ -1.67
C11orf88-204ENST00000529661 TAS2R40P59535 323 aa4.62□□□□□ -1.67
C11orf88-204ENST00000529661 LRMPQ12912 555 aa4.62□□□□□ -1.67
C11orf88-204ENST00000529661 KEAP1Q14145 624 aa4.62□□□□□ -1.67
C11orf88-204ENST00000529661 NFATC4Q14934 902 aa4.62□□□□□ -1.67
C11orf88-204ENST00000529661 PLCB4Q15147 1175 aa4.62□□□□□ -1.67
C11orf88-204ENST00000529661 TDRD12Q587J7 1177 aaKnown RBP4.62□□□□□ -1.67
C11orf88-204ENST00000529661 LRIF1Q5T3J3 769 aa4.62□□□□□ -1.67
C11orf88-204ENST00000529661 NADSYN1Q6IA69 706 aa4.62□□□□□ -1.67
C11orf88-204ENST00000529661 CAPRIN2Q6IMN6 1127 aaKnown RBP4.62□□□□□ -1.67
C11orf88-204ENST00000529661 LINC00346Q8IVM7 164 aa4.62□□□□□ -1.67
C11orf88-204ENST00000529661 SYT2Q8N9I0 419 aaPredicted RBP4.62□□□□□ -1.67
C11orf88-204ENST00000529661 SCCPDHQ8NBX0 429 aa4.62□□□□□ -1.67
C11orf88-204ENST00000529661 KCTD6Q8NC69 237 aa4.62□□□□□ -1.67
C11orf88-204ENST00000529661 PRPF31Q8WWY3 499 aaKnown RBP4.62□□□□□ -1.67
C11orf88-204ENST00000529661 HARBI1Q96MB7 349 aa4.62□□□□□ -1.67
C11orf88-204ENST00000529661 IFIH1Q9BYX4 1025 aaKnown RBP4.62□□□□□ -1.67
C11orf88-204ENST00000529661 KCNN2Q9H2S1 579 aa4.62□□□□□ -1.67
C11orf88-204ENST00000529661 ZCCHC17Q9NP64 241 aaKnown RBP4.62□□□□□ -1.67
C11orf88-204ENST00000529661 LTB4R2Q9NPC1 389 aa4.62□□□□□ -1.67
C11orf88-204ENST00000529661 MTMR10Q9NXD2 777 aa4.62□□□□□ -1.67
C11orf88-204ENST00000529661 MARCH4Q9P2E8 410 aaPredicted RBP4.62□□□□□ -1.67
C11orf88-204ENST00000529661 IL36RNQ9UBH0 155 aa4.62□□□□□ -1.67
C11orf88-204ENST00000529661 CFDP1Q9UEE9 299 aaPredicted RBP4.62□□□□□ -1.67
C11orf88-204ENST00000529661 CHORDC1Q9UHD1 332 aaPredicted RBP4.62□□□□□ -1.67
C11orf88-204ENST00000529661 C1orf226A1L170 272 aa4.61□□□□□ -1.67
C11orf88-204ENST00000529661 WNT9BO14905 357 aa4.61□□□□□ -1.67
C11orf88-204ENST00000529661 MITFO75030 526 aaPredicted RBP4.61□□□□□ -1.67
C11orf88-204ENST00000529661 HIST1H2ABP04908 130 aa4.61□□□□□ -1.67
C11orf88-204ENST00000529661 ACTN1P12814 892 aa4.61□□□□□ -1.67
C11orf88-204ENST00000529661 CD58P19256 250 aa4.61□□□□□ -1.67
C11orf88-204ENST00000529661 HIST1H2ADP20671 130 aa4.61□□□□□ -1.67
C11orf88-204ENST00000529661 ITGB8P26012 769 aa4.61□□□□□ -1.67
C11orf88-204ENST00000529661 PNLIPRP2P54317 469 aa4.61□□□□□ -1.67
C11orf88-204ENST00000529661 RAD23BP54727 409 aa4.61□□□□□ -1.67
C11orf88-204ENST00000529661 ACSM2AQ08AH3 577 aa4.61□□□□□ -1.67
C11orf88-204ENST00000529661 AIMP1Q12904 312 aaKnown RBP4.61□□□□□ -1.67
C11orf88-204ENST00000529661 TNFAIP1Q13829 316 aa4.61□□□□□ -1.67
C11orf88-204ENST00000529661 BAATQ14032 418 aaPredicted RBP4.61□□□□□ -1.67
C11orf88-204ENST00000529661 MYBPC2Q14324 1141 aa4.61□□□□□ -1.67
C11orf88-204ENST00000529661 NEDD9Q14511 834 aa4.61□□□□□ -1.67
C11orf88-204ENST00000529661 RASA2Q15283 850 aa4.61□□□□□ -1.67
C11orf88-204ENST00000529661 IZUMO4Q1ZYL8 232 aa4.61□□□□□ -1.67
C11orf88-204ENST00000529661 RARS2Q5T160 578 aaKnown RBP4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms