RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 SLC39A8Q9C0K1 460 aa8.95□□□□□ -0.98
VPS11-203ENST00000529545 LRRC19Q9H756 370 aa8.95□□□□□ -0.98
VPS11-203ENST00000529545 ADAM22Q9P0K1 906 aa8.95□□□□□ -0.98
VPS11-203ENST00000529545 KCND3Q9UK17 655 aa8.95□□□□□ -0.98
VPS11-203ENST00000529545 FZD10Q9ULW2 581 aa8.95□□□□□ -0.98
VPS11-203ENST00000529545 ICE1Q9Y2F5 2266 aa8.94□□□□□ -0.98
VPS11-203ENST00000529545 UNC79Q9P2D8 2635 aa8.94□□□□□ -0.98
VPS11-203ENST00000529545 SIGLEC16A6NMB1 481 aa8.94□□□□□ -0.98
VPS11-203ENST00000529545 F8VZ95 297 aa8.94□□□□□ -0.98
VPS11-203ENST00000529545 PSMD11O00231 422 aa8.94□□□□□ -0.98
VPS11-203ENST00000529545 DFFAO00273 331 aa8.94□□□□□ -0.98
VPS11-203ENST00000529545 EEF2KO00418 725 aaKnown RBP8.94□□□□□ -0.98
VPS11-203ENST00000529545 TRAFD1O14545 582 aaPredicted RBP8.94□□□□□ -0.98
VPS11-203ENST00000529545 KATNA1O75449 491 aa8.94□□□□□ -0.98
VPS11-203ENST00000529545 GFPT2O94808 682 aa8.94□□□□□ -0.98
VPS11-203ENST00000529545 HEXIM1O94992 359 aaKnown RBP8.94□□□□□ -0.98
VPS11-203ENST00000529545 MAP3K6O95382 1288 aa8.94□□□□□ -0.98
VPS11-203ENST00000529545 CPP00450 1065 aa8.94□□□□□ -0.98
VPS11-203ENST00000529545 AVPP01185 164 aa8.94□□□□□ -0.98
VPS11-203ENST00000529545 SLC2A4P14672 509 aa8.94□□□□□ -0.98
VPS11-203ENST00000529545 NR1D1P20393 614 aa8.94□□□□□ -0.98
VPS11-203ENST00000529545 GNLYP22749 145 aa8.94□□□□□ -0.98
VPS11-203ENST00000529545 TEAD1P28347 426 aa8.94□□□□□ -0.98
VPS11-203ENST00000529545 DLSTP36957 453 aa8.94□□□□□ -0.98
VPS11-203ENST00000529545 ETV3P41162 512 aa8.94□□□□□ -0.98
VPS11-203ENST00000529545 MAPK9P45984 424 aa8.94□□□□□ -0.98
VPS11-203ENST00000529545 UQCRFS1P47985 274 aa8.94□□□□□ -0.98
VPS11-203ENST00000529545 ZNF143P52747 638 aaPredicted RBP8.94□□□□□ -0.98
VPS11-203ENST00000529545 HHEXQ03014 270 aa8.94□□□□□ -0.98
VPS11-203ENST00000529545 FOXM1Q08050 763 aa8.94□□□□□ -0.98
VPS11-203ENST00000529545 IL10RBQ08334 325 aa8.94□□□□□ -0.98
VPS11-203ENST00000529545 ERV3-1Q14264 604 aa8.94□□□□□ -0.98
VPS11-203ENST00000529545 SYCP1Q15431 976 aa8.94□□□□□ -0.98
VPS11-203ENST00000529545 ATP1A1-AS1Q5TC04 95 aa8.94□□□□□ -0.98
VPS11-203ENST00000529545 CAPRIN2Q6IMN6 1127 aaKnown RBP8.94□□□□□ -0.98
VPS11-203ENST00000529545 C6orf15Q6UXA7 325 aaPredicted RBP8.94□□□□□ -0.98
VPS11-203ENST00000529545 NDUFAF2Q8N183 169 aa8.94□□□□□ -0.98
VPS11-203ENST00000529545 MLKLQ8NB16 471 aa8.94□□□□□ -0.98
VPS11-203ENST00000529545 C3orf20Q8ND61 904 aa8.94□□□□□ -0.98
VPS11-203ENST00000529545 CPT1CQ8TCG5 803 aa8.94□□□□□ -0.98
VPS11-203ENST00000529545 SLC37A2Q8TED4 501 aa8.94□□□□□ -0.98
VPS11-203ENST00000529545 STAMBPL1Q96FJ0 436 aa8.94□□□□□ -0.98
VPS11-203ENST00000529545 NAA15Q9BXJ9 866 aaKnown RBP8.94□□□□□ -0.98
VPS11-203ENST00000529545 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.94□□□□□ -0.98
VPS11-203ENST00000529545 ULBP3Q9BZM4 244 aa8.94□□□□□ -0.98
VPS11-203ENST00000529545 EPB41L1Q9H4G0 881 aa8.94□□□□□ -0.98
VPS11-203ENST00000529545 APMAPQ9HDC9 416 aa8.94□□□□□ -0.98
VPS11-203ENST00000529545 CUEDC1Q9NWM3 386 aaPredicted RBP8.94□□□□□ -0.98
VPS11-203ENST00000529545 KLHL3Q9UH77 587 aa8.94□□□□□ -0.98
VPS11-203ENST00000529545 NOCTQ9UK39 431 aaKnown RBP8.94□□□□□ -0.98
VPS11-203ENST00000529545 PHTF1Q9UMS5 762 aa8.94□□□□□ -0.98
VPS11-203ENST00000529545 PLEKHM1Q9Y4G2 1056 aa8.94□□□□□ -0.98
VPS11-203ENST00000529545 CREBBPQ92793 2442 aa8.94□□□□□ -0.98
VPS11-203ENST00000529545 BSNQ9UPA5 3926 aa8.93□□□□□ -0.98
VPS11-203ENST00000529545 PIPSLA2A3N6 862 aa8.93□□□□□ -0.98
VPS11-203ENST00000529545 CDC14CA4D256 554 aa8.93□□□□□ -0.98
VPS11-203ENST00000529545 EIF3CLB5ME19 914 aaKnown RBP8.93□□□□□ -0.98
VPS11-203ENST00000529545 CCP110O43303 1012 aa8.93□□□□□ -0.98
VPS11-203ENST00000529545 SOCS5O75159 536 aa8.93□□□□□ -0.98
VPS11-203ENST00000529545 ASMTLO95671 621 aa8.93□□□□□ -0.98
VPS11-203ENST00000529545 DDAH2O95865 285 aa8.93□□□□□ -0.98
VPS11-203ENST00000529545 DLGAP3O95886 979 aa8.93□□□□□ -0.98
VPS11-203ENST00000529545 PYGLP06737 847 aa8.93□□□□□ -0.98
VPS11-203ENST00000529545 HSPA9P38646 679 aaKnown RBP8.93□□□□□ -0.98
VPS11-203ENST00000529545 PMS2P54278 862 aa8.93□□□□□ -0.98
VPS11-203ENST00000529545 EPHA4P54764 986 aa8.93□□□□□ -0.98
VPS11-203ENST00000529545 GSCP56915 257 aaPredicted RBP8.93□□□□□ -0.98
VPS11-203ENST00000529545 FMO1Q01740 532 aa8.93□□□□□ -0.98
VPS11-203ENST00000529545 DPTQ07507 201 aa8.93□□□□□ -0.98
VPS11-203ENST00000529545 NFATC2Q13469 925 aa8.93□□□□□ -0.98
VPS11-203ENST00000529545 ZNF235Q14590 738 aa8.93□□□□□ -0.98
VPS11-203ENST00000529545 LBRQ14739 615 aaKnown RBP8.93□□□□□ -0.98
VPS11-203ENST00000529545 TUSC1Q2TAM9 212 aa8.93□□□□□ -0.98
VPS11-203ENST00000529545 MIIPQ5JXC2 388 aa8.93□□□□□ -0.98
VPS11-203ENST00000529545 TMCO4Q5TGY1 634 aa8.93□□□□□ -0.98
VPS11-203ENST00000529545 ZNF787Q6DD87 383 aa8.93□□□□□ -0.98
VPS11-203ENST00000529545 DPY19L2P1Q6NXN4 242 aa8.93□□□□□ -0.98
VPS11-203ENST00000529545 DNAJC24Q6P3W2 148 aa8.93□□□□□ -0.98
VPS11-203ENST00000529545 DCUN1D2Q6PH85 259 aa8.93□□□□□ -0.98
VPS11-203ENST00000529545 Q6ZVL8 140 aa8.93□□□□□ -0.98
VPS11-203ENST00000529545 MARK2Q7KZI7 788 aaKnown RBP8.93□□□□□ -0.98
VPS11-203ENST00000529545 LYSMD3Q7Z3D4 306 aa8.93□□□□□ -0.98
VPS11-203ENST00000529545 HSD11B1LQ7Z5J1 315 aa8.93□□□□□ -0.98
VPS11-203ENST00000529545 SLC9B2Q86UD5 537 aa8.93□□□□□ -0.98
VPS11-203ENST00000529545 PLXDC1Q8IUK5 500 aa8.93□□□□□ -0.98
VPS11-203ENST00000529545 BBS5Q8N3I7 341 aa8.93□□□□□ -0.98
VPS11-203ENST00000529545 SFRP1Q8N474 314 aa8.93□□□□□ -0.98
VPS11-203ENST00000529545 AVL9Q8NBF6 648 aa8.93□□□□□ -0.98
VPS11-203ENST00000529545 AP2M1Q96CW1 435 aa8.93□□□□□ -0.98
VPS11-203ENST00000529545 SCARF2Q96GP6 870 aaPredicted RBP8.93□□□□□ -0.98
VPS11-203ENST00000529545 ZNF599Q96NL3 588 aa8.93□□□□□ -0.98
VPS11-203ENST00000529545 PSKH2Q96QS6 385 aa8.93□□□□□ -0.98
VPS11-203ENST00000529545 EIF3CQ99613 913 aaKnown RBP8.93□□□□□ -0.98
VPS11-203ENST00000529545 CNPY3Q9BT09 278 aa8.93□□□□□ -0.98
VPS11-203ENST00000529545 SARS2Q9NP81 518 aaKnown RBP8.93□□□□□ -0.98
VPS11-203ENST00000529545 SEPT11Q9NVA2 429 aaKnown RBP8.93□□□□□ -0.98
VPS11-203ENST00000529545 CNOT8Q9UFF9 292 aaKnown RBP8.93□□□□□ -0.98
VPS11-203ENST00000529545 ZNHIT2Q9UHR6 403 aa8.93□□□□□ -0.98
VPS11-203ENST00000529545 TLK1Q9UKI8 766 aa8.93□□□□□ -0.98
VPS11-203ENST00000529545 TMEM98Q9Y2Y6 226 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms