RNA–Protein interactions for RNA: ENST00000528877.5

ITGB1-218, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-218ENST00000528877 DPYSL3Q14195 570 aa7.09□□□□□ -1.27
ITGB1-218ENST00000528877 ZNF235Q14590 738 aa7.09□□□□□ -1.27
ITGB1-218ENST00000528877 LRRC14Q15048 493 aa7.09□□□□□ -1.27
ITGB1-218ENST00000528877 PAFAH1B3Q15102 231 aaKnown RBP7.09□□□□□ -1.27
ITGB1-218ENST00000528877 PDK2Q15119 407 aa7.09□□□□□ -1.27
ITGB1-218ENST00000528877 TCEAL1Q15170 157 aa7.09□□□□□ -1.27
ITGB1-218ENST00000528877 IRF4Q15306 451 aa7.09□□□□□ -1.27
ITGB1-218ENST00000528877 LRRC73Q5JTD7 316 aa7.09□□□□□ -1.27
ITGB1-218ENST00000528877 CCDC122Q5T0U0 273 aa7.09□□□□□ -1.27
ITGB1-218ENST00000528877 CFAP58Q5T655 872 aa7.09□□□□□ -1.27
ITGB1-218ENST00000528877 NCBP2-AS2Q69YL0 99 aa7.09□□□□□ -1.27
ITGB1-218ENST00000528877 PAOXQ6QHF9 649 aa7.09□□□□□ -1.27
ITGB1-218ENST00000528877 DHRS13Q6UX07 377 aa7.09□□□□□ -1.27
ITGB1-218ENST00000528877 H2AFVQ71UI9 128 aa7.09□□□□□ -1.27
ITGB1-218ENST00000528877 CAMK1DQ8IU85 385 aa7.09□□□□□ -1.27
ITGB1-218ENST00000528877 CNGA4Q8IV77 575 aa7.09□□□□□ -1.27
ITGB1-218ENST00000528877 TP53INP2Q8IXH6 220 aa7.09□□□□□ -1.27
ITGB1-218ENST00000528877 SDR16C5Q8N3Y7 309 aa7.09□□□□□ -1.27
ITGB1-218ENST00000528877 ATPAF2Q8N5M1 289 aa7.09□□□□□ -1.27
ITGB1-218ENST00000528877 TEX26Q8N6G2 289 aa7.09□□□□□ -1.27
ITGB1-218ENST00000528877 DCBLD1Q8N8Z6 715 aa7.09□□□□□ -1.27
ITGB1-218ENST00000528877 CPLX3Q8WVH0 158 aa7.09□□□□□ -1.27
ITGB1-218ENST00000528877 BTN2A2Q8WVV5 523 aa7.09□□□□□ -1.27
ITGB1-218ENST00000528877 CTNNBL1Q8WYA6 563 aaPredicted RBP7.09□□□□□ -1.27
ITGB1-218ENST00000528877 MAML1Q92585 1016 aa7.09□□□□□ -1.27
ITGB1-218ENST00000528877 HSPH1Q92598 858 aa7.09□□□□□ -1.27
ITGB1-218ENST00000528877 NXPE2Q96DL1 559 aa7.09□□□□□ -1.27
ITGB1-218ENST00000528877 MCCC1Q96RQ3 725 aaPredicted RBP7.09□□□□□ -1.27
ITGB1-218ENST00000528877 NUDCD1Q96RS6 583 aa7.09□□□□□ -1.27
ITGB1-218ENST00000528877 WRAP53Q9BUR4 548 aaKnown RBP7.09□□□□□ -1.27
ITGB1-218ENST00000528877 BOCQ9BWV1 1114 aa7.09□□□□□ -1.27
ITGB1-218ENST00000528877 DNAJC28Q9NX36 388 aa7.09□□□□□ -1.27
ITGB1-218ENST00000528877 KCTD5Q9NXV2 234 aa7.09□□□□□ -1.27
ITGB1-218ENST00000528877 PNMA8BQ9ULN7 279 aaPredicted RBP7.09□□□□□ -1.27
ITGB1-218ENST00000528877 BPTFQ12830 3046 aa7.09□□□□□ -1.28
ITGB1-218ENST00000528877 FAM95CA0A1B0GW59 222 aa7.08□□□□□ -1.28
ITGB1-218ENST00000528877 HMX2A2RU54 273 aa7.08□□□□□ -1.28
ITGB1-218ENST00000528877 LMO7DNF2Z398 122 aa7.08□□□□□ -1.28
ITGB1-218ENST00000528877 K7ESM1 405 aa7.08□□□□□ -1.28
ITGB1-218ENST00000528877 PSMD11O00231 422 aa7.08□□□□□ -1.28
ITGB1-218ENST00000528877 MFSD11O43934 449 aa7.08□□□□□ -1.28
ITGB1-218ENST00000528877 DLGAP3O95886 979 aa7.08□□□□□ -1.28
ITGB1-218ENST00000528877 HOXC4P09017 264 aaPredicted RBP7.08□□□□□ -1.28
ITGB1-218ENST00000528877 CD48P09326 243 aa7.08□□□□□ -1.28
ITGB1-218ENST00000528877 TPM1P09493 284 aa7.08□□□□□ -1.28
ITGB1-218ENST00000528877 ELFN1P0C7U0 828 aa7.08□□□□□ -1.28
ITGB1-218ENST00000528877 GM2AP17900 193 aa7.08□□□□□ -1.28
ITGB1-218ENST00000528877 XPAP23025 273 aaPredicted RBP7.08□□□□□ -1.28
ITGB1-218ENST00000528877 TEAD1P28347 426 aa7.08□□□□□ -1.28
ITGB1-218ENST00000528877 GSTT1P30711 240 aa7.08□□□□□ -1.28
ITGB1-218ENST00000528877 TRIM23P36406 574 aa7.08□□□□□ -1.28
ITGB1-218ENST00000528877 GARSP41250 739 aaKnown RBP7.08□□□□□ -1.28
ITGB1-218ENST00000528877 ARHGAP25P42331 645 aa7.08□□□□□ -1.28
ITGB1-218ENST00000528877 MMP13P45452 471 aa7.08□□□□□ -1.28
ITGB1-218ENST00000528877 THOP1P52888 689 aa7.08□□□□□ -1.28
ITGB1-218ENST00000528877 POLR2LP62875 67 aaKnown RBP7.08□□□□□ -1.28
ITGB1-218ENST00000528877 E2F1Q01094 437 aa7.08□□□□□ -1.28
ITGB1-218ENST00000528877 TBX2Q13207 712 aaPredicted RBP7.08□□□□□ -1.28
ITGB1-218ENST00000528877 KRT81Q14533 505 aa7.08□□□□□ -1.28
ITGB1-218ENST00000528877 NFATC4Q14934 902 aa7.08□□□□□ -1.28
ITGB1-218ENST00000528877 NFKBIBQ15653 356 aa7.08□□□□□ -1.28
ITGB1-218ENST00000528877 HADHQ16836 314 aaKnown RBP7.08□□□□□ -1.28
ITGB1-218ENST00000528877 WSCD2Q2TBF2 565 aa7.08□□□□□ -1.28
ITGB1-218ENST00000528877 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.08□□□□□ -1.28
ITGB1-218ENST00000528877 HS1BP3Q53T59 392 aa7.08□□□□□ -1.28
ITGB1-218ENST00000528877 HES3Q5TGS1 186 aa7.08□□□□□ -1.28
ITGB1-218ENST00000528877 LRRC38Q5VT99 294 aa7.08□□□□□ -1.28
ITGB1-218ENST00000528877 CDCP2Q5VXM1 449 aa7.08□□□□□ -1.28
ITGB1-218ENST00000528877 ESRP1Q6NXG1 681 aaKnown RBP7.08□□□□□ -1.28
ITGB1-218ENST00000528877 LIPIQ6XZB0 460 aa7.08□□□□□ -1.28
ITGB1-218ENST00000528877 RHOT2Q8IXI1 618 aa7.08□□□□□ -1.28
ITGB1-218ENST00000528877 RAVER1Q8IY67 606 aaKnown RBP7.08□□□□□ -1.28
ITGB1-218ENST00000528877 PHACTR4Q8IZ21 702 aa7.08□□□□□ -1.28
ITGB1-218ENST00000528877 BBS5Q8N3I7 341 aa7.08□□□□□ -1.28
ITGB1-218ENST00000528877 PGBD5Q8N414 524 aa7.08□□□□□ -1.28
ITGB1-218ENST00000528877 FSTL5Q8N475 847 aaPredicted RBP7.08□□□□□ -1.28
ITGB1-218ENST00000528877 NETO2Q8NC67 525 aa7.08□□□□□ -1.28
ITGB1-218ENST00000528877 C2CD4AQ8NCU7 369 aaPredicted RBP7.08□□□□□ -1.28
ITGB1-218ENST00000528877 ATL2Q8NHH9 583 aa7.08□□□□□ -1.28
ITGB1-218ENST00000528877 PCDH19Q8TAB3 1148 aa7.08□□□□□ -1.28
ITGB1-218ENST00000528877 APOLD1Q96LR9 279 aa7.08□□□□□ -1.28
ITGB1-218ENST00000528877 COQ10AQ96MF6 247 aa7.08□□□□□ -1.28
ITGB1-218ENST00000528877 NSMCE3Q96MG7 304 aa7.08□□□□□ -1.28
ITGB1-218ENST00000528877 FRMD6Q96NE9 622 aa7.08□□□□□ -1.28
ITGB1-218ENST00000528877 TSGA13Q96PP4 275 aa7.08□□□□□ -1.28
ITGB1-218ENST00000528877 LRRC61Q9BV99 259 aa7.08□□□□□ -1.28
ITGB1-218ENST00000528877 PACSIN1Q9BY11 444 aa7.08□□□□□ -1.28
ITGB1-218ENST00000528877 CCDC86Q9H6F5 360 aaKnown RBP7.08□□□□□ -1.28
ITGB1-218ENST00000528877 MBNL1Q9NR56 388 aaKnown RBP7.08□□□□□ -1.28
ITGB1-218ENST00000528877 CTTNBP2NLQ9P2B4 639 aa7.08□□□□□ -1.28
ITGB1-218ENST00000528877 SPASTQ9UBP0 616 aa7.08□□□□□ -1.28
ITGB1-218ENST00000528877 APOBEC3BQ9UH17 382 aaKnown RBP7.08□□□□□ -1.28
ITGB1-218ENST00000528877 INTUQ9ULD6 942 aa7.08□□□□□ -1.28
ITGB1-218ENST00000528877 PPIL1Q9Y3C6 166 aa7.08□□□□□ -1.28
ITGB1-218ENST00000528877 DGKBQ9Y6T7 804 aa7.08□□□□□ -1.28
ITGB1-218ENST00000528877 ATRXP46100 2492 aa7.08□□□□□ -1.28
ITGB1-218ENST00000528877 LRRK1Q38SD2 2015 aa7.08□□□□□ -1.28
ITGB1-218ENST00000528877 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.07□□□□□ -1.28
ITGB1-218ENST00000528877 C3orf70A6NLC5 250 aaPredicted RBP7.07□□□□□ -1.28
ITGB1-218ENST00000528877 TAF4O00268 1085 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms