RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 ANKRD66B4E2M5 251 aa14.12□□□□□ -0.15
CAPN1-212ENST00000527887 AKR1B15C9JRZ8 316 aaPredicted RBP14.12□□□□□ -0.15
CAPN1-212ENST00000527887 PPP1R12AO14974 1030 aaPredicted RBP14.12□□□□□ -0.15
CAPN1-212ENST00000527887 SOD1P00441 154 aa14.12□□□□□ -0.15
CAPN1-212ENST00000527887 JCHAINP01591 159 aa14.12□□□□□ -0.15
CAPN1-212ENST00000527887 HLA-DQB2P05538 268 aa14.12□□□□□ -0.15
CAPN1-212ENST00000527887 JMJD7P0C870 316 aa14.12□□□□□ -0.15
CAPN1-212ENST00000527887 CTBSQ01459 385 aa14.12□□□□□ -0.15
CAPN1-212ENST00000527887 NIPAL4Q0D2K0 466 aa14.12□□□□□ -0.15
CAPN1-212ENST00000527887 C19orf57Q0VDD7 668 aa14.12□□□□□ -0.15
CAPN1-212ENST00000527887 BIRC2Q13490 618 aa14.12□□□□□ -0.15
CAPN1-212ENST00000527887 SQSTM1Q13501 440 aa14.12□□□□□ -0.15
CAPN1-212ENST00000527887 PDK1Q15118 436 aa14.12□□□□□ -0.15
CAPN1-212ENST00000527887 ODF2Q5BJF6 829 aa14.12□□□□□ -0.15
CAPN1-212ENST00000527887 SLC9A4Q6AI14 798 aa14.12□□□□□ -0.15
CAPN1-212ENST00000527887 OR2M4Q96R27 311 aa14.12□□□□□ -0.15
CAPN1-212ENST00000527887 SRPK1Q96SB4 655 aaKnown RBP14.12□□□□□ -0.15
CAPN1-212ENST00000527887 MLPHQ9BV36 600 aaPredicted RBP14.12□□□□□ -0.15
CAPN1-212ENST00000527887 FOXP3Q9BZS1 431 aa14.12□□□□□ -0.15
CAPN1-212ENST00000527887 RMI1Q9H9A7 625 aa14.12□□□□□ -0.15
CAPN1-212ENST00000527887 DDX56Q9NY93 547 aaKnown RBP14.12□□□□□ -0.15
CAPN1-212ENST00000527887 PKD2L2Q9NZM6 624 aa14.12□□□□□ -0.15
CAPN1-212ENST00000527887 VPS18Q9P253 973 aa14.12□□□□□ -0.15
CAPN1-212ENST00000527887 LOXL2Q9Y4K0 774 aa14.12□□□□□ -0.15
CAPN1-212ENST00000527887 RP1P56715 2156 aa14.12□□□□□ -0.15
CAPN1-212ENST00000527887 LRRD1A4D1F6 860 aa14.11□□□□□ -0.15
CAPN1-212ENST00000527887 ESPNB1AK53 854 aa14.11□□□□□ -0.15
CAPN1-212ENST00000527887 K7ENP7 123 aa14.11□□□□□ -0.15
CAPN1-212ENST00000527887 APOL1O14791 398 aa14.11□□□□□ -0.15
CAPN1-212ENST00000527887 CASC3O15234 703 aaKnown RBP14.11□□□□□ -0.15
CAPN1-212ENST00000527887 B4GAT1O43505 415 aa14.11□□□□□ -0.15
CAPN1-212ENST00000527887 MFAP3LO75121 409 aa14.11□□□□□ -0.15
CAPN1-212ENST00000527887 MAP3K6O95382 1288 aa14.11□□□□□ -0.15
CAPN1-212ENST00000527887 ECEL1O95672 775 aa14.11□□□□□ -0.15
CAPN1-212ENST00000527887 FECHP22830 423 aa14.11□□□□□ -0.15
CAPN1-212ENST00000527887 CD82P27701 267 aa14.11□□□□□ -0.15
CAPN1-212ENST00000527887 SPINT3P49223 89 aa14.11□□□□□ -0.15
CAPN1-212ENST00000527887 TRA2AQ13595 282 aaKnown RBP eCLIP14.11□□□□□ -0.15
CAPN1-212ENST00000527887 IHHQ14623 411 aa14.11□□□□□ -0.15
CAPN1-212ENST00000527887 PTPRRQ15256 657 aa14.11□□□□□ -0.15
CAPN1-212ENST00000527887 SLC14A2Q15849 920 aa14.11□□□□□ -0.15
CAPN1-212ENST00000527887 LRRK1Q38SD2 2015 aa14.11□□□□□ -0.15
CAPN1-212ENST00000527887 PYCR3Q53H96 274 aa14.11□□□□□ -0.15
CAPN1-212ENST00000527887 INO80CQ6PI98 192 aaPredicted RBP14.11□□□□□ -0.15
CAPN1-212ENST00000527887 SLC30A9Q6PML9 568 aa14.11□□□□□ -0.15
CAPN1-212ENST00000527887 CPNE8Q86YQ8 564 aa14.11□□□□□ -0.15
CAPN1-212ENST00000527887 GALNT13Q8IUC8 556 aa14.11□□□□□ -0.15
CAPN1-212ENST00000527887 SLITRK4Q8IW52 837 aa14.11□□□□□ -0.15
CAPN1-212ENST00000527887 RHOT1Q8IXI2 618 aa14.11□□□□□ -0.15
CAPN1-212ENST00000527887 PLD5Q8N7P1 536 aa14.11□□□□□ -0.15
CAPN1-212ENST00000527887 LPCAT1Q8NF37 534 aa14.11□□□□□ -0.15
CAPN1-212ENST00000527887 SCAMP4Q969E2 229 aa14.11□□□□□ -0.15
CAPN1-212ENST00000527887 CHP1Q99653 195 aa14.11□□□□□ -0.15
CAPN1-212ENST00000527887 FAM83DQ9H4H8 585 aa14.11□□□□□ -0.15
CAPN1-212ENST00000527887 RAD18Q9NS91 495 aa14.11□□□□□ -0.15
CAPN1-212ENST00000527887 CD84Q9UIB8 345 aa14.11□□□□□ -0.15
CAPN1-212ENST00000527887 HEY1Q9Y5J3 304 aa14.11□□□□□ -0.15
CAPN1-212ENST00000527887 C1orf232A0A0U1RR37 186 aa14.1□□□□□ -0.15
CAPN1-212ENST00000527887 C3orf70A6NLC5 250 aaPredicted RBP14.1□□□□□ -0.15
CAPN1-212ENST00000527887 KCNK1O00180 336 aa14.1□□□□□ -0.15
CAPN1-212ENST00000527887 HGSO14964 777 aaPredicted RBP14.1□□□□□ -0.15
CAPN1-212ENST00000527887 CLDN7O95471 211 aa14.1□□□□□ -0.15
CAPN1-212ENST00000527887 AK4P27144 223 aaPredicted RBP14.1□□□□□ -0.15
CAPN1-212ENST00000527887 SLC5A2P31639 672 aa14.1□□□□□ -0.15
CAPN1-212ENST00000527887 ACTR1BP42025 376 aa14.1□□□□□ -0.15
CAPN1-212ENST00000527887 CD86P42081 329 aa14.1□□□□□ -0.15
CAPN1-212ENST00000527887 FASLGP48023 281 aa14.1□□□□□ -0.15
CAPN1-212ENST00000527887 POLD2P49005 469 aa14.1□□□□□ -0.15
CAPN1-212ENST00000527887 NR2C2P49116 596 aa14.1□□□□□ -0.15
CAPN1-212ENST00000527887 ACTR1AP61163 376 aa14.1□□□□□ -0.15
CAPN1-212ENST00000527887 GPLD1P80108 840 aa14.1□□□□□ -0.15
CAPN1-212ENST00000527887 CLN3Q13286 438 aa14.1□□□□□ -0.15
CAPN1-212ENST00000527887 QPCTQ16769 361 aa14.1□□□□□ -0.15
CAPN1-212ENST00000527887 MAP9Q49MG5 647 aa14.1□□□□□ -0.15
CAPN1-212ENST00000527887 HENMT1Q5T8I9 393 aaKnown RBP14.1□□□□□ -0.15
CAPN1-212ENST00000527887 ARHGAP40Q5TG30 622 aa14.1□□□□□ -0.15
CAPN1-212ENST00000527887 TMEM164Q5U3C3 297 aa14.1□□□□□ -0.15
CAPN1-212ENST00000527887 CCDC81Q6ZN84 652 aa14.1□□□□□ -0.15
CAPN1-212ENST00000527887 RFLNAQ6ZTI6 216 aa14.1□□□□□ -0.15
CAPN1-212ENST00000527887 NAGSQ8N159 534 aa14.1□□□□□ -0.15
CAPN1-212ENST00000527887 CNTD1Q8N815 330 aa14.1□□□□□ -0.15
CAPN1-212ENST00000527887 TC2NQ8N9U0 490 aa14.1□□□□□ -0.15
CAPN1-212ENST00000527887 CCNL2Q96S94 520 aaPredicted RBP14.1□□□□□ -0.15
CAPN1-212ENST00000527887 RIOK2Q9BVS4 552 aaKnown RBP14.1□□□□□ -0.15
CAPN1-212ENST00000527887 CPNE5Q9HCH3 593 aa14.1□□□□□ -0.15
CAPN1-212ENST00000527887 KCND1Q9NSA2 647 aa14.1□□□□□ -0.15
CAPN1-212ENST00000527887 ATXN7L1Q9ULK2 861 aaPredicted RBP14.1□□□□□ -0.15
CAPN1-212ENST00000527887 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.1□□□□□ -0.15
CAPN1-212ENST00000527887 CFAP46Q8IYW2 2715 aa14.1□□□□□ -0.15
CAPN1-212ENST00000527887 GPR89AB7ZAQ6 455 aa14.09□□□□□ -0.15
CAPN1-212ENST00000527887 ASMTLO95671 621 aa14.09□□□□□ -0.15
CAPN1-212ENST00000527887 MMP2P08253 660 aa14.09□□□□□ -0.15
CAPN1-212ENST00000527887 GPR89BP0CG08 455 aa14.09□□□□□ -0.15
CAPN1-212ENST00000527887 SLC2A4P14672 509 aa14.09□□□□□ -0.15
CAPN1-212ENST00000527887 MSNP26038 577 aaKnown RBP14.09□□□□□ -0.15
CAPN1-212ENST00000527887 ALDH4A1P30038 563 aa14.09□□□□□ -0.15
CAPN1-212ENST00000527887 MAZP56270 477 aaKnown RBP14.09□□□□□ -0.15
CAPN1-212ENST00000527887 OR1D5P58170 312 aa14.09□□□□□ -0.15
CAPN1-212ENST00000527887 AP1B1Q10567 949 aa14.09□□□□□ -0.15
CAPN1-212ENST00000527887 TFDP2Q14188 446 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms