RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 TTC9BQ8N6N2 239 aa15.02□□□□□ -0.01
USP47-207ENST00000527733 AHCYL2Q96HN2 611 aaKnown RBP15.02□□□□□ -0.01
USP47-207ENST00000527733 CDKN2AIPNLQ96HQ2 116 aa15.02□□□□□ -0.01
USP47-207ENST00000527733 ZNF556Q9HAH1 456 aa15.02□□□□□ -0.01
USP47-207ENST00000527733 SSC5DA1L4H1 1573 aa15.02□□□□□ -0.01
USP47-207ENST00000527733 DYRK3O43781 588 aa15.02□□□□□ -0.01
USP47-207ENST00000527733 STC2O76061 302 aa15.02□□□□□ -0.01
USP47-207ENST00000527733 ACAP2Q15057 778 aa15.02□□□□□ -0.01
USP47-207ENST00000527733 XKR6Q5GH73 641 aa15.02□□□□□ -0.01
USP47-207ENST00000527733 UBR7Q8N806 425 aa15.02□□□□□ -0.01
USP47-207ENST00000527733 DIS3LQ8TF46 1054 aaKnown RBP15.02□□□□□ -0.01
USP47-207ENST00000527733 ANLNQ9NQW6 1124 aa15.02□□□□□ -0.01
USP47-207ENST00000527733 C15orf38-AP3S2A0A0A6YYH1 394 aa15.01□□□□□ -0.01
USP47-207ENST00000527733 DCLK1O15075 740 aa15.01□□□□□ -0.01
USP47-207ENST00000527733 PDHA1P08559 390 aa15.01□□□□□ -0.01
USP47-207ENST00000527733 AMD1P17707 334 aa15.01□□□□□ -0.01
USP47-207ENST00000527733 CCNHP51946 323 aaPredicted RBP15.01□□□□□ -0.01
USP47-207ENST00000527733 PLEKHG6Q3KR16 790 aa15.01□□□□□ -0.01
USP47-207ENST00000527733 C2orf27AQ580R0 203 aa15.01□□□□□ -0.01
USP47-207ENST00000527733 RIPOR1Q6ZS17 1223 aa15.01□□□□□ -0.01
USP47-207ENST00000527733 ARPINQ7Z6K5 226 aa15.01□□□□□ -0.01
USP47-207ENST00000527733 HORMAD1Q86X24 394 aa15.01□□□□□ -0.01
USP47-207ENST00000527733 CENPLQ8N0S6 344 aaPredicted RBP15.01□□□□□ -0.01
USP47-207ENST00000527733 TRAF6Q9Y4K3 522 aa15.01□□□□□ -0.01
USP47-207ENST00000527733 TEX264Q9Y6I9 313 aa15.01□□□□□ -0.01
USP47-207ENST00000527733 GOLGA4Q13439 2230 aaKnown RBP15.01□□□□□ -0.01
USP47-207ENST00000527733 MYH10P35580 1976 aa15.01□□□□□ -0.01
USP47-207ENST00000527733 A0A088AWK7 358 aa15.01□□□□□ -0.01
USP47-207ENST00000527733 C2orf78A6NCI8 922 aa15.01□□□□□ -0.01
USP47-207ENST00000527733 OR2AG2A6NM03 316 aa15.01□□□□□ -0.01
USP47-207ENST00000527733 FOXO6A8MYZ6 492 aa15.01□□□□□ -0.01
USP47-207ENST00000527733 ANKRD66B4E2M5 251 aa15.01□□□□□ -0.01
USP47-207ENST00000527733 SGTAO43765 313 aa15.01□□□□□ -0.01
USP47-207ENST00000527733 EPOP01588 193 aa15.01□□□□□ -0.01
USP47-207ENST00000527733 ZNF10P21506 573 aaPredicted RBP15.01□□□□□ -0.01
USP47-207ENST00000527733 USP46P62068 366 aa15.01□□□□□ -0.01
USP47-207ENST00000527733 MED21Q13503 144 aa15.01□□□□□ -0.01
USP47-207ENST00000527733 RCN1Q15293 331 aa15.01□□□□□ -0.01
USP47-207ENST00000527733 ZNF783Q6ZMS7 281 aa15.01□□□□□ -0.01
USP47-207ENST00000527733 ARHGAP36Q6ZRI8 547 aa15.01□□□□□ -0.01
USP47-207ENST00000527733 BBS7Q8IWZ6 715 aa15.01□□□□□ -0.01
USP47-207ENST00000527733 TCAIMQ8N3R3 496 aa15.01□□□□□ -0.01
USP47-207ENST00000527733 RIN3Q8TB24 985 aa15.01□□□□□ -0.01
USP47-207ENST00000527733 CYB5D2Q8WUJ1 264 aa15.01□□□□□ -0.01
USP47-207ENST00000527733 CCDC134Q9H6E4 229 aa15.01□□□□□ -0.01
USP47-207ENST00000527733 SFXN1Q9H9B4 322 aa15.01□□□□□ -0.01
USP47-207ENST00000527733 A0A0D9SEW6 157 aa15.01□□□□□ -0.01
USP47-207ENST00000527733 GUCY1B2O75343 617 aa15.01□□□□□ -0.01
USP47-207ENST00000527733 MYLK3Q32MK0 819 aa15.01□□□□□ -0.01
USP47-207ENST00000527733 ARSIQ5FYB1 569 aa15.01□□□□□ -0.01
USP47-207ENST00000527733 PGAP3Q96FM1 320 aaPredicted RBP15.01□□□□□ -0.01
USP47-207ENST00000527733 OSBPL1AQ9BXW6 950 aa15.01□□□□□ -0.01
USP47-207ENST00000527733 SLC12A4Q9UP95 1085 aa15.01□□□□□ -0.01
USP47-207ENST00000527733 DTNAQ9Y4J8 743 aa15.01□□□□□ -0.01
USP47-207ENST00000527733 PAPPA2Q9BXP8 1791 aa15.01□□□□□ -0.01
USP47-207ENST00000527733 HGFP14210 728 aa15□□□□□ -0.01
USP47-207ENST00000527733 NEK3P51956 506 aa15□□□□□ -0.01
USP47-207ENST00000527733 PEX6Q13608 980 aa15□□□□□ -0.01
USP47-207ENST00000527733 PHKG1Q16816 387 aa15□□□□□ -0.01
USP47-207ENST00000527733 SNX20Q7Z614 316 aa15□□□□□ -0.01
USP47-207ENST00000527733 CUZD1Q86UP6 607 aa15□□□□□ -0.01
USP47-207ENST00000527733 IGSF8Q969P0 613 aa15□□□□□ -0.01
USP47-207ENST00000527733 DCLRE1BQ9H816 532 aa15□□□□□ -0.01
USP47-207ENST00000527733 USP29Q9HBJ7 922 aa15□□□□□ -0.01
USP47-207ENST00000527733 MAPRE3Q9UPY8 281 aa15□□□□□ -0.01
USP47-207ENST00000527733 ECM29Q5VYK3 1845 aa15□□□□□ -0.01
USP47-207ENST00000527733 EPHA3P29320 983 aa15□□□□□ -0.01
USP47-207ENST00000527733 HPCAL1P37235 193 aa15□□□□□ -0.01
USP47-207ENST00000527733 USP4Q13107 963 aa15□□□□□ -0.01
USP47-207ENST00000527733 PITRM1Q5JRX3 1037 aa15□□□□□ -0.01
USP47-207ENST00000527733 LRRC73Q5JTD7 316 aa15□□□□□ -0.01
USP47-207ENST00000527733 C12orf76Q8N812 135 aaPredicted RBP15□□□□□ -0.01
USP47-207ENST00000527733 TMEM237Q96Q45 408 aa15□□□□□ -0.01
USP47-207ENST00000527733 FERD3LQ96RJ6 166 aa15□□□□□ -0.01
USP47-207ENST00000527733 CAPN10Q9HC96 672 aa15□□□□□ -0.01
USP47-207ENST00000527733 IMP3Q9NV31 184 aaKnown RBP15□□□□□ -0.01
USP47-207ENST00000527733 PNPOQ9NVS9 261 aa15□□□□□ -0.01
USP47-207ENST00000527733 BTRCQ9Y297 605 aa15□□□□□ -0.01
USP47-207ENST00000527733 ATP6AP2A0A1C7CYW4 349 aa15□□□□□ -0.01
USP47-207ENST00000527733 MEI4A8MW99 385 aa15□□□□□ -0.01
USP47-207ENST00000527733 ATP6AP2O75787 350 aa15□□□□□ -0.01
USP47-207ENST00000527733 IDSP22304 550 aa15□□□□□ -0.01
USP47-207ENST00000527733 MTHFRP42898 656 aa15□□□□□ -0.01
USP47-207ENST00000527733 PLOD1Q02809 727 aaPredicted RBP15□□□□□ -0.01
USP47-207ENST00000527733 DPYSQ14117 519 aa15□□□□□ -0.01
USP47-207ENST00000527733 PIK3R6Q5UE93 754 aa15□□□□□ -0.01
USP47-207ENST00000527733 C22orf39Q6P5X5 142 aa15□□□□□ -0.01
USP47-207ENST00000527733 DNAJC14Q6Y2X3 702 aaPredicted RBP15□□□□□ -0.01
USP47-207ENST00000527733 ZNF555Q8NEP9 628 aa15□□□□□ -0.01
USP47-207ENST00000527733 CENPIQ92674 756 aaPredicted RBP15□□□□□ -0.01
USP47-207ENST00000527733 CCDC90BQ9GZT6 254 aa15□□□□□ -0.01
USP47-207ENST00000527733 CDH19Q9H159 772 aa15□□□□□ -0.01
USP47-207ENST00000527733 POLMQ9NP87 494 aaPredicted RBP15□□□□□ -0.01
USP47-207ENST00000527733 ZDHHC4Q9NPG8 344 aa15□□□□□ -0.01
USP47-207ENST00000527733 RFPL2O75678 378 aa15□□□□□ -0.01
USP47-207ENST00000527733 STK16O75716 305 aa15□□□□□ -0.01
USP47-207ENST00000527733 LATS1O95835 1130 aa15□□□□□ -0.01
USP47-207ENST00000527733 IFNA14P01570 189 aa15□□□□□ -0.01
USP47-207ENST00000527733 CCR3P51677 355 aa15□□□□□ -0.01
USP47-207ENST00000527733 SEMG2Q02383 582 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms