RNA–Protein interactions for RNA: ENST00000525902.5

CTNND1-212, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 4,984 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-212ENST00000525902 AGPAT3Q9NRZ7 376 aa6.55□□□□□ -1.36
CTNND1-212ENST00000525902 TMEM59LQ9UK28 342 aa6.55□□□□□ -1.36
CTNND1-212ENST00000525902 C5orf51A6NDU8 294 aa6.55□□□□□ -1.36
CTNND1-212ENST00000525902 SPDYE2BA6NHP3 402 aa6.55□□□□□ -1.36
CTNND1-212ENST00000525902 HMX3A6NHT5 357 aa6.55□□□□□ -1.36
CTNND1-212ENST00000525902 LRRC14BA6NHZ5 514 aa6.55□□□□□ -1.36
CTNND1-212ENST00000525902 NR5A2O00482 541 aa6.55□□□□□ -1.36
CTNND1-212ENST00000525902 AVILO75366 819 aa6.55□□□□□ -1.36
CTNND1-212ENST00000525902 SPDYE6P0CI01 402 aa6.55□□□□□ -1.36
CTNND1-212ENST00000525902 PGAM1P18669 254 aa6.55□□□□□ -1.36
CTNND1-212ENST00000525902 AKT1P31749 480 aa6.55□□□□□ -1.36
CTNND1-212ENST00000525902 RPL22P35268 128 aaKnown RBP6.55□□□□□ -1.36
CTNND1-212ENST00000525902 NR4A2P43354 598 aa6.55□□□□□ -1.36
CTNND1-212ENST00000525902 ARCN1P48444 511 aaKnown RBP6.55□□□□□ -1.36
CTNND1-212ENST00000525902 KCNJ5P48544 419 aa6.55□□□□□ -1.36
CTNND1-212ENST00000525902 AIF1P55008 147 aa6.55□□□□□ -1.36
CTNND1-212ENST00000525902 ERVK-21P61565 698 aa6.55□□□□□ -1.36
CTNND1-212ENST00000525902 CYP2A13Q16696 494 aa6.55□□□□□ -1.36
CTNND1-212ENST00000525902 VARS2Q5ST30 1063 aaKnown RBP6.55□□□□□ -1.36
CTNND1-212ENST00000525902 FAM102AQ5T9C2 384 aaPredicted RBP6.55□□□□□ -1.36
CTNND1-212ENST00000525902 INTS11Q5TA45 600 aaKnown RBP6.55□□□□□ -1.36
CTNND1-212ENST00000525902 MSANTD2Q6P1R3 559 aa6.55□□□□□ -1.36
CTNND1-212ENST00000525902 KLHL24Q6TFL4 600 aa6.55□□□□□ -1.36
CTNND1-212ENST00000525902 MACC1Q6ZN28 852 aa6.55□□□□□ -1.36
CTNND1-212ENST00000525902 CFAP77Q6ZQR2 320 aa6.55□□□□□ -1.36
CTNND1-212ENST00000525902 OTOP3Q7RTS5 596 aa6.55□□□□□ -1.36
CTNND1-212ENST00000525902 FAM228AQ86W67 206 aa6.55□□□□□ -1.36
CTNND1-212ENST00000525902 PARP8Q8N3A8 854 aa6.55□□□□□ -1.36
CTNND1-212ENST00000525902 FNDC5Q8NAU1 212 aa6.55□□□□□ -1.36
CTNND1-212ENST00000525902 AGBL3Q8NEM8 1001 aa6.55□□□□□ -1.36
CTNND1-212ENST00000525902 GPR156Q8NFN8 814 aa6.55□□□□□ -1.36
CTNND1-212ENST00000525902 REPS1Q96D71 796 aa6.55□□□□□ -1.36
CTNND1-212ENST00000525902 IFT43Q96FT9 208 aa6.55□□□□□ -1.36
CTNND1-212ENST00000525902 PRICKLE1Q96MT3 831 aaPredicted RBP6.55□□□□□ -1.36
CTNND1-212ENST00000525902 DPYSL5Q9BPU6 564 aa6.55□□□□□ -1.36
CTNND1-212ENST00000525902 RBM4BQ9BQ04 359 aaKnown RBP6.55□□□□□ -1.36
CTNND1-212ENST00000525902 SLC30A2Q9BRI3 323 aa6.55□□□□□ -1.36
CTNND1-212ENST00000525902 RBM4Q9BWF3 364 aaKnown RBP6.55□□□□□ -1.36
CTNND1-212ENST00000525902 DSN1Q9H410 356 aa6.55□□□□□ -1.36
CTNND1-212ENST00000525902 MROH8Q9H579 483 aa6.55□□□□□ -1.36
CTNND1-212ENST00000525902 RERGLQ9H628 205 aa6.55□□□□□ -1.36
CTNND1-212ENST00000525902 RPF1Q9H9Y2 349 aaKnown RBP6.55□□□□□ -1.36
CTNND1-212ENST00000525902 LRRC4Q9HBW1 653 aa6.55□□□□□ -1.36
CTNND1-212ENST00000525902 RIMKLBQ9ULI2 386 aa6.55□□□□□ -1.36
CTNND1-212ENST00000525902 TECPR2O15040 1411 aa6.55□□□□□ -1.36
CTNND1-212ENST00000525902 ARHGEF28Q8N1W1 1705 aaKnown RBP6.55□□□□□ -1.36
CTNND1-212ENST00000525902 BCLAF3A2AJT9 711 aaKnown RBP6.55□□□□□ -1.36
CTNND1-212ENST00000525902 TOR1BO14657 336 aa6.55□□□□□ -1.36
CTNND1-212ENST00000525902 GDF11O95390 407 aa6.55□□□□□ -1.36
CTNND1-212ENST00000525902 GPIP06744 558 aa6.55□□□□□ -1.36
CTNND1-212ENST00000525902 LBPP18428 481 aa6.55□□□□□ -1.36
CTNND1-212ENST00000525902 NELFEP18615 380 aaKnown RBP6.55□□□□□ -1.36
CTNND1-212ENST00000525902 HOXD13P35453 343 aa6.55□□□□□ -1.36
CTNND1-212ENST00000525902 ELK3P41970 407 aa6.55□□□□□ -1.36
CTNND1-212ENST00000525902 ARF5P84085 180 aa6.55□□□□□ -1.36
CTNND1-212ENST00000525902 SNRNP35Q16560 246 aaKnown RBP6.55□□□□□ -1.36
CTNND1-212ENST00000525902 RNF151Q2KHN1 245 aa6.55□□□□□ -1.36
CTNND1-212ENST00000525902 EXOC3L2Q2M3D2 409 aa6.55□□□□□ -1.36
CTNND1-212ENST00000525902 TMEM119Q4V9L6 283 aa6.55□□□□□ -1.36
CTNND1-212ENST00000525902 SYTL3Q4VX76 610 aa6.55□□□□□ -1.36
CTNND1-212ENST00000525902 FAM180BQ6P0A1 224 aa6.55□□□□□ -1.36
CTNND1-212ENST00000525902 SLFN11Q7Z7L1 901 aa6.55□□□□□ -1.36
CTNND1-212ENST00000525902 ZNF655Q8N720 491 aaPredicted RBP6.55□□□□□ -1.36
CTNND1-212ENST00000525902 ZNF527Q8NB42 609 aa6.55□□□□□ -1.36
CTNND1-212ENST00000525902 KDM1BQ8NB78 822 aa6.55□□□□□ -1.36
CTNND1-212ENST00000525902 SEMA6DQ8NFY4 1073 aa6.55□□□□□ -1.36
CTNND1-212ENST00000525902 AKR7LQ8NHP1 331 aa6.55□□□□□ -1.36
CTNND1-212ENST00000525902 SLCO2A1Q92959 643 aa6.55□□□□□ -1.36
CTNND1-212ENST00000525902 RCN3Q96D15 328 aa6.55□□□□□ -1.36
CTNND1-212ENST00000525902 RNF32Q9H0A6 362 aa6.55□□□□□ -1.36
CTNND1-212ENST00000525902 FN3KQ9H479 309 aa6.55□□□□□ -1.36
CTNND1-212ENST00000525902 SACM1LQ9NTJ5 587 aa6.55□□□□□ -1.36
CTNND1-212ENST00000525902 DDX43Q9NXZ2 648 aaKnown RBP6.55□□□□□ -1.36
CTNND1-212ENST00000525902 IKZF3Q9UKT9 509 aa6.55□□□□□ -1.36
CTNND1-212ENST00000525902 NOX1Q9Y5S8 564 aa6.55□□□□□ -1.36
CTNND1-212ENST00000525902 ZNF804BA4D1E1 1349 aa6.55□□□□□ -1.36
CTNND1-212ENST00000525902 FAM95CA0A1B0GW59 222 aa6.54□□□□□ -1.36
CTNND1-212ENST00000525902 USP17L3A6NCW0 530 aa6.54□□□□□ -1.36
CTNND1-212ENST00000525902 USP17L4A6NCW7 530 aa6.54□□□□□ -1.36
CTNND1-212ENST00000525902 ANKDD1BA6NHY2 528 aa6.54□□□□□ -1.36
CTNND1-212ENST00000525902 H0YGN5 161 aa6.54□□□□□ -1.36
CTNND1-212ENST00000525902 KLF11O14901 512 aa6.54□□□□□ -1.36
CTNND1-212ENST00000525902 DDX3YO15523 660 aaKnown RBP6.54□□□□□ -1.36
CTNND1-212ENST00000525902 CYP27B1O15528 508 aa6.54□□□□□ -1.36
CTNND1-212ENST00000525902 DYNC1LI2O43237 492 aaPredicted RBP6.54□□□□□ -1.36
CTNND1-212ENST00000525902 ZNF254O75437 659 aa6.54□□□□□ -1.36
CTNND1-212ENST00000525902 RPS6KA4O75676 772 aa6.54□□□□□ -1.36
CTNND1-212ENST00000525902 HTR3BO95264 441 aa6.54□□□□□ -1.36
CTNND1-212ENST00000525902 VAPBO95292 243 aa6.54□□□□□ -1.36
CTNND1-212ENST00000525902 LCKP06239 509 aa6.54□□□□□ -1.36
CTNND1-212ENST00000525902 GDI1P31150 447 aa6.54□□□□□ -1.36
CTNND1-212ENST00000525902 ALDH3A2P51648 485 aa6.54□□□□□ -1.36
CTNND1-212ENST00000525902 NKX6-1P78426 367 aaPredicted RBP6.54□□□□□ -1.36
CTNND1-212ENST00000525902 MPP1Q00013 466 aa6.54□□□□□ -1.36
CTNND1-212ENST00000525902 TROAPQ12815 778 aa6.54□□□□□ -1.36
CTNND1-212ENST00000525902 SNTA1Q13424 505 aa6.54□□□□□ -1.36
CTNND1-212ENST00000525902 PKN1Q16512 942 aa6.54□□□□□ -1.36
CTNND1-212ENST00000525902 LSM12Q3MHD2 195 aaKnown RBP6.54□□□□□ -1.36
CTNND1-212ENST00000525902 DENND1BQ6P3S1 775 aa6.54□□□□□ -1.36
CTNND1-212ENST00000525902 FAM199XQ6PEV8 388 aaPredicted RBP6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms