RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 THPOP40225 353 aa3.97□□□□□ -1.77
CD44-219ENST00000525685 RFX2P48378 723 aa3.97□□□□□ -1.77
CD44-219ENST00000525685 NUDT6P53370 316 aa3.97□□□□□ -1.77
CD44-219ENST00000525685 PGGT1BP53609 377 aa3.97□□□□□ -1.77
CD44-219ENST00000525685 RPS3AP61247 264 aaKnown RBP3.97□□□□□ -1.77
CD44-219ENST00000525685 RPL7AP62424 266 aaKnown RBP3.97□□□□□ -1.77
CD44-219ENST00000525685 SORDQ00796 357 aa3.97□□□□□ -1.77
CD44-219ENST00000525685 DSC1Q08554 894 aa3.97□□□□□ -1.77
CD44-219ENST00000525685 LMOD3Q0VAK6 560 aa3.97□□□□□ -1.77
CD44-219ENST00000525685 TRAF1Q13077 416 aa3.97□□□□□ -1.77
CD44-219ENST00000525685 ITPK1Q13572 414 aa3.97□□□□□ -1.77
CD44-219ENST00000525685 ERV3-1Q14264 604 aa3.97□□□□□ -1.77
CD44-219ENST00000525685 MYBPC2Q14324 1141 aa3.97□□□□□ -1.77
CD44-219ENST00000525685 RNPS1Q15287 305 aaKnown RBP3.97□□□□□ -1.77
CD44-219ENST00000525685 TBCEQ15813 527 aaPredicted RBP3.97□□□□□ -1.77
CD44-219ENST00000525685 CCNG2Q16589 344 aa3.97□□□□□ -1.77
CD44-219ENST00000525685 SOWAHAQ2M3V2 549 aa3.97□□□□□ -1.77
CD44-219ENST00000525685 PRICKLE4Q2TBC4 344 aa3.97□□□□□ -1.77
CD44-219ENST00000525685 ODF3L2Q3SX64 289 aa3.97□□□□□ -1.77
CD44-219ENST00000525685 KIAA1161Q6NSJ0 714 aa3.97□□□□□ -1.77
CD44-219ENST00000525685 INO80CQ6PI98 192 aaPredicted RBP3.97□□□□□ -1.77
CD44-219ENST00000525685 TSSK4Q6SA08 328 aa3.97□□□□□ -1.77
CD44-219ENST00000525685 KLHL24Q6TFL4 600 aa3.97□□□□□ -1.77
CD44-219ENST00000525685 LCTLQ6UWM7 567 aa3.97□□□□□ -1.77
CD44-219ENST00000525685 C4orf50Q6ZRC1 276 aa3.97□□□□□ -1.77
CD44-219ENST00000525685 MCM10Q7L590 875 aa3.97□□□□□ -1.77
CD44-219ENST00000525685 DHX40Q8IX18 779 aaKnown RBP3.97□□□□□ -1.77
CD44-219ENST00000525685 TMEM163Q8TC26 289 aa3.97□□□□□ -1.77
CD44-219ENST00000525685 TRIB2Q92519 343 aa3.97□□□□□ -1.77
CD44-219ENST00000525685 GTF3C6Q969F1 213 aa3.97□□□□□ -1.77
CD44-219ENST00000525685 FBXL8Q96CD0 374 aa3.97□□□□□ -1.77
CD44-219ENST00000525685 TXNDC15Q96J42 360 aa3.97□□□□□ -1.77
CD44-219ENST00000525685 PIP5K1AQ99755 562 aa3.97□□□□□ -1.77
CD44-219ENST00000525685 NTPCRQ9BSD7 190 aaKnown RBP3.97□□□□□ -1.77
CD44-219ENST00000525685 THUMPD2Q9BTF0 503 aaKnown RBP3.97□□□□□ -1.77
CD44-219ENST00000525685 DCLK3Q9C098 648 aa3.97□□□□□ -1.77
CD44-219ENST00000525685 USP44Q9H0E7 712 aa3.97□□□□□ -1.77
CD44-219ENST00000525685 MAGEE1Q9HCI5 957 aa3.97□□□□□ -1.77
CD44-219ENST00000525685 PLK2Q9NYY3 685 aa3.97□□□□□ -1.77
CD44-219ENST00000525685 CISD1Q9NZ45 108 aaKnown RBP3.97□□□□□ -1.77
CD44-219ENST00000525685 LIMA1Q9UHB6 759 aaKnown RBP3.97□□□□□ -1.77
CD44-219ENST00000525685 HAO1Q9UJM8 370 aa3.97□□□□□ -1.77
CD44-219ENST00000525685 PNMA2Q9UL42 364 aa3.97□□□□□ -1.77
CD44-219ENST00000525685 MYO6Q9UM54 1294 aa3.97□□□□□ -1.77
CD44-219ENST00000525685 LSM4Q9Y4Z0 139 aaKnown RBP3.97□□□□□ -1.77
CD44-219ENST00000525685 A3GALT2U3KPV4 340 aa3.97□□□□□ -1.77
CD44-219ENST00000525685 COL24A1Q17RW2 1714 aa3.97□□□□□ -1.77
CD44-219ENST00000525685 A0A1B0GVM2 712 aa3.96□□□□□ -1.78
CD44-219ENST00000525685 CBY3A6NI87 242 aa3.96□□□□□ -1.78
CD44-219ENST00000525685 RGS14O43566 566 aa3.96□□□□□ -1.78
CD44-219ENST00000525685 HTATSF1O43719 755 aaKnown RBP3.96□□□□□ -1.78
CD44-219ENST00000525685 RNASEH2AO75792 299 aaKnown RBP3.96□□□□□ -1.78
CD44-219ENST00000525685 SERPINI2O75830 405 aa3.96□□□□□ -1.78
CD44-219ENST00000525685 NDUFB4O95168 129 aa3.96□□□□□ -1.78
CD44-219ENST00000525685 PRSS2P07478 247 aa3.96□□□□□ -1.78
CD44-219ENST00000525685 CD58P19256 250 aa3.96□□□□□ -1.78
CD44-219ENST00000525685 C21orf33P30042 268 aaPredicted RBP3.96□□□□□ -1.78
CD44-219ENST00000525685 DCTDP32321 178 aa3.96□□□□□ -1.78
CD44-219ENST00000525685 TMPOP42166 694 aaKnown RBP3.96□□□□□ -1.78
CD44-219ENST00000525685 CDKN2AP42771 156 aaKnown RBP3.96□□□□□ -1.78
CD44-219ENST00000525685 PCYT1AP49585 367 aa3.96□□□□□ -1.78
CD44-219ENST00000525685 ARF3P61204 181 aaPredicted RBP3.96□□□□□ -1.78
CD44-219ENST00000525685 ARF1P84077 181 aaKnown RBP3.96□□□□□ -1.78
CD44-219ENST00000525685 TEFQ10587 303 aa3.96□□□□□ -1.78
CD44-219ENST00000525685 ST3GAL1Q11201 340 aa3.96□□□□□ -1.78
CD44-219ENST00000525685 TMEM115Q12893 351 aaPredicted RBP3.96□□□□□ -1.78
CD44-219ENST00000525685 GPS2Q13227 327 aa3.96□□□□□ -1.78
CD44-219ENST00000525685 SLC39A6Q13433 755 aa3.96□□□□□ -1.78
CD44-219ENST00000525685 FRG1Q14331 258 aaKnown RBP3.96□□□□□ -1.78
CD44-219ENST00000525685 SLC15A2Q16348 729 aa3.96□□□□□ -1.78
CD44-219ENST00000525685 ZNF284Q2VY69 593 aa3.96□□□□□ -1.78
CD44-219ENST00000525685 DPCR1Q3MIW9 517 aa3.96□□□□□ -1.78
CD44-219ENST00000525685 TRILQ7L0X0 811 aa3.96□□□□□ -1.78
CD44-219ENST00000525685 FJX1Q86VR8 437 aa3.96□□□□□ -1.78
CD44-219ENST00000525685 SFTPA2Q8IWL1 248 aa3.96□□□□□ -1.78
CD44-219ENST00000525685 FBXL14Q8N1E6 418 aa3.96□□□□□ -1.78
CD44-219ENST00000525685 SCCPDHQ8NBX0 429 aa3.96□□□□□ -1.78
CD44-219ENST00000525685 GPT2Q8TD30 523 aa3.96□□□□□ -1.78
CD44-219ENST00000525685 TIGD1Q96MW7 591 aa3.96□□□□□ -1.78
CD44-219ENST00000525685 NR1H4Q96RI1 486 aaPredicted RBP3.96□□□□□ -1.78
CD44-219ENST00000525685 HIPK2Q9H2X6 1198 aa3.96□□□□□ -1.78
CD44-219ENST00000525685 PNNQ9H307 717 aaKnown RBP3.96□□□□□ -1.78
CD44-219ENST00000525685 KIF9Q9HAQ2 790 aa3.96□□□□□ -1.78
CD44-219ENST00000525685 OR6C3Q9NZP0 311 aa3.96□□□□□ -1.78
CD44-219ENST00000525685 RCOR1Q9UKL0 485 aa3.96□□□□□ -1.78
CD44-219ENST00000525685 MKLN1Q9UL63 735 aa3.96□□□□□ -1.78
CD44-219ENST00000525685 SCINQ9Y6U3 715 aa3.96□□□□□ -1.78
CD44-219ENST00000525685 SCN7AQ01118 1682 aa3.96□□□□□ -1.78
CD44-219ENST00000525685 UTYO14607 1347 aa3.95□□□□□ -1.78
CD44-219ENST00000525685 ITIH6Q6UXX5 1313 aa3.95□□□□□ -1.78
CD44-219ENST00000525685 KAT6BQ8WYB5 2073 aa3.95□□□□□ -1.78
CD44-219ENST00000525685 BCORQ6W2J9 1755 aa3.95□□□□□ -1.78
CD44-219ENST00000525685 HEG1Q9ULI3 1381 aa3.95□□□□□ -1.78
CD44-219ENST00000525685 AKR1B15C9JRZ8 316 aaPredicted RBP3.95□□□□□ -1.78
CD44-219ENST00000525685 INAFM1C9JVW0 142 aa3.95□□□□□ -1.78
CD44-219ENST00000525685 TIPRLO75663 272 aa3.95□□□□□ -1.78
CD44-219ENST00000525685 TMEM63AO94886 807 aa3.95□□□□□ -1.78
CD44-219ENST00000525685 ITGAXP20702 1163 aa3.95□□□□□ -1.78
CD44-219ENST00000525685 GNLYP22749 145 aa3.95□□□□□ -1.78
CD44-219ENST00000525685 PPARGP37231 505 aaPredicted RBP3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms