RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 FRMD3A2A2Y4 597 aa3.16□□□□□ -1.9
CSDE1-208ENST00000524652 ZSCAN9O15535 394 aaPredicted RBP3.16□□□□□ -1.9
CSDE1-208ENST00000524652 NBNO60934 754 aa3.16□□□□□ -1.9
CSDE1-208ENST00000524652 CABYRO75952 493 aa3.16□□□□□ -1.9
CSDE1-208ENST00000524652 CLTBP09497 229 aa3.16□□□□□ -1.9
CSDE1-208ENST00000524652 MYL4P12829 197 aa3.16□□□□□ -1.9
CSDE1-208ENST00000524652 GLRA2P23416 452 aa3.16□□□□□ -1.9
CSDE1-208ENST00000524652 NMT1P30419 496 aaKnown RBP3.16□□□□□ -1.9
CSDE1-208ENST00000524652 AGTR2P50052 363 aa3.16□□□□□ -1.9
CSDE1-208ENST00000524652 SLC26A2P50443 739 aa3.16□□□□□ -1.9
CSDE1-208ENST00000524652 GPC3P51654 580 aa3.16□□□□□ -1.9
CSDE1-208ENST00000524652 CASP5P51878 434 aa3.16□□□□□ -1.9
CSDE1-208ENST00000524652 ZNF131P52739 623 aa3.16□□□□□ -1.9
CSDE1-208ENST00000524652 CCL23P55773 120 aa3.16□□□□□ -1.9
CSDE1-208ENST00000524652 PNOCQ13519 176 aa3.16□□□□□ -1.9
CSDE1-208ENST00000524652 ATP1A4Q13733 1029 aa3.16□□□□□ -1.9
CSDE1-208ENST00000524652 GIT2Q14161 759 aa3.16□□□□□ -1.9
CSDE1-208ENST00000524652 GALEQ14376 348 aa3.16□□□□□ -1.9
CSDE1-208ENST00000524652 ASIC2Q16515 512 aa3.16□□□□□ -1.9
CSDE1-208ENST00000524652 SLC5A9Q2M3M2 681 aa3.16□□□□□ -1.9
CSDE1-208ENST00000524652 ODF3L2Q3SX64 289 aa3.16□□□□□ -1.9
CSDE1-208ENST00000524652 ZNF484Q5JVG2 852 aa3.16□□□□□ -1.9
CSDE1-208ENST00000524652 C6orf10Q5SRN2 563 aa3.16□□□□□ -1.9
CSDE1-208ENST00000524652 LCE1EQ5T753 118 aa3.16□□□□□ -1.9
CSDE1-208ENST00000524652 RRAGBQ5VZM2 374 aa3.16□□□□□ -1.9
CSDE1-208ENST00000524652 NUGGCQ68CJ6 796 aa3.16□□□□□ -1.9
CSDE1-208ENST00000524652 CCDC144NLQ6NUI1 221 aa3.16□□□□□ -1.9
CSDE1-208ENST00000524652 DHRS13Q6UX07 377 aa3.16□□□□□ -1.9
CSDE1-208ENST00000524652 KIAA0408Q6ZU52 694 aa3.16□□□□□ -1.9
CSDE1-208ENST00000524652 FAM228AQ86W67 206 aa3.16□□□□□ -1.9
CSDE1-208ENST00000524652 GPBP1Q86WP2 473 aa3.16□□□□□ -1.9
CSDE1-208ENST00000524652 CCDC28AQ8IWP9 274 aa3.16□□□□□ -1.9
CSDE1-208ENST00000524652 DDIASQ8IXT1 998 aa3.16□□□□□ -1.9
CSDE1-208ENST00000524652 DCP1BQ8IZD4 617 aaKnown RBP3.16□□□□□ -1.9
CSDE1-208ENST00000524652 ATP11CQ8NB49 1132 aa3.16□□□□□ -1.9
CSDE1-208ENST00000524652 PRPF31Q8WWY3 499 aaKnown RBP3.16□□□□□ -1.9
CSDE1-208ENST00000524652 CENPIQ92674 756 aaPredicted RBP3.16□□□□□ -1.9
CSDE1-208ENST00000524652 ATP2A3Q93084 1043 aa3.16□□□□□ -1.9
CSDE1-208ENST00000524652 LRRC46Q96FV0 321 aa3.16□□□□□ -1.9
CSDE1-208ENST00000524652 CALML4Q96GE6 196 aa3.16□□□□□ -1.9
CSDE1-208ENST00000524652 PAGE5Q96GU1 130 aa3.16□□□□□ -1.9
CSDE1-208ENST00000524652 KIFC3Q9BVG8 833 aa3.16□□□□□ -1.9
CSDE1-208ENST00000524652 STRA6Q9BX79 667 aa3.16□□□□□ -1.9
CSDE1-208ENST00000524652 RAB34Q9BZG1 259 aa3.16□□□□□ -1.9
CSDE1-208ENST00000524652 TRIM9Q9C026 710 aa3.16□□□□□ -1.9
CSDE1-208ENST00000524652 NT5C3AQ9H0P0 336 aa3.16□□□□□ -1.9
CSDE1-208ENST00000524652 FAM49AQ9H0Q0 323 aaPredicted RBP3.16□□□□□ -1.9
CSDE1-208ENST00000524652 CXCL16Q9H2A7 254 aa3.16□□□□□ -1.9
CSDE1-208ENST00000524652 TASP1Q9H6P5 420 aa3.16□□□□□ -1.9
CSDE1-208ENST00000524652 NRBP2Q9NSY0 501 aa3.16□□□□□ -1.9
CSDE1-208ENST00000524652 ANKEF1Q9NU02 776 aa3.16□□□□□ -1.9
CSDE1-208ENST00000524652 DACT1Q9NYF0 836 aa3.16□□□□□ -1.9
CSDE1-208ENST00000524652 ZNF215Q9UL58 517 aaPredicted RBP3.16□□□□□ -1.9
CSDE1-208ENST00000524652 ZMYND8Q9ULU4 1186 aaPredicted RBP3.16□□□□□ -1.9
CSDE1-208ENST00000524652 ICKQ9UPZ9 632 aa3.16□□□□□ -1.9
CSDE1-208ENST00000524652 PCDHGB6Q9Y5F9 930 aa3.16□□□□□ -1.9
CSDE1-208ENST00000524652 ATP6V1DQ9Y5K8 247 aa3.16□□□□□ -1.9
CSDE1-208ENST00000524652 PTPRDP23468 1912 aa3.16□□□□□ -1.9
CSDE1-208ENST00000524652 MTCL1Q9Y4B5 1905 aaKnown RBP3.16□□□□□ -1.9
CSDE1-208ENST00000524652 MYO7AQ13402 2215 aa3.16□□□□□ -1.9
CSDE1-208ENST00000524652 ZNF462Q96JM2 2506 aa3.16□□□□□ -1.9
CSDE1-208ENST00000524652 GREB1Q4ZG55 1949 aa3.15□□□□□ -1.9
CSDE1-208ENST00000524652 ZNF638Q14966 1978 aaKnown RBP3.15□□□□□ -1.91
CSDE1-208ENST00000524652 ARHGEF35A5YM69 484 aa3.15□□□□□ -1.91
CSDE1-208ENST00000524652 DPPA5A6NC42 116 aa3.15□□□□□ -1.91
CSDE1-208ENST00000524652 RRN3P2A6NIE6 340 aa3.15□□□□□ -1.91
CSDE1-208ENST00000524652 A6NNC1 897 aa3.15□□□□□ -1.91
CSDE1-208ENST00000524652 RHPN2P1A8MT19 583 aa3.15□□□□□ -1.91
CSDE1-208ENST00000524652 B4GALT5O43286 388 aa3.15□□□□□ -1.91
CSDE1-208ENST00000524652 DKC1O60832 514 aaKnown RBP eCLIP3.15□□□□□ -1.91
CSDE1-208ENST00000524652 TIMP1P01033 207 aa3.15□□□□□ -1.91
CSDE1-208ENST00000524652 GHRP10912 638 aa3.15□□□□□ -1.91
CSDE1-208ENST00000524652 IDEP14735 1019 aa3.15□□□□□ -1.91
CSDE1-208ENST00000524652 CSF2RAP15509 400 aa3.15□□□□□ -1.91
CSDE1-208ENST00000524652 EGR1P18146 543 aa3.15□□□□□ -1.91
CSDE1-208ENST00000524652 CD52P31358 61 aa3.15□□□□□ -1.91
CSDE1-208ENST00000524652 HOXD13P35453 343 aa3.15□□□□□ -1.91
CSDE1-208ENST00000524652 THPOP40225 353 aa3.15□□□□□ -1.91
CSDE1-208ENST00000524652 SYKP43405 635 aa3.15□□□□□ -1.91
CSDE1-208ENST00000524652 GSTM5P46439 218 aa3.15□□□□□ -1.91
CSDE1-208ENST00000524652 NLRP11P59045 1033 aaKnown RBP3.15□□□□□ -1.91
CSDE1-208ENST00000524652 PTENP60484 403 aa3.15□□□□□ -1.91
CSDE1-208ENST00000524652 UBE2HP62256 183 aa3.15□□□□□ -1.91
CSDE1-208ENST00000524652 MRPS6P82932 125 aaKnown RBP3.15□□□□□ -1.91
CSDE1-208ENST00000524652 EGR4Q05215 589 aa3.15□□□□□ -1.91
CSDE1-208ENST00000524652 MBTD1Q05BQ5 628 aa3.15□□□□□ -1.91
CSDE1-208ENST00000524652 LAMTOR4Q0VGL1 99 aa3.15□□□□□ -1.91
CSDE1-208ENST00000524652 STK4Q13043 487 aa3.15□□□□□ -1.91
CSDE1-208ENST00000524652 COASYQ13057 564 aa3.15□□□□□ -1.91
CSDE1-208ENST00000524652 LPIN1Q14693 890 aa3.15□□□□□ -1.91
CSDE1-208ENST00000524652 POSTNQ15063 836 aa3.15□□□□□ -1.91
CSDE1-208ENST00000524652 CAMK4Q16566 473 aa3.15□□□□□ -1.91
CSDE1-208ENST00000524652 ZC2HC1CQ53FD0 456 aaPredicted RBP3.15□□□□□ -1.91
CSDE1-208ENST00000524652 FBXO47Q5MNV8 452 aa3.15□□□□□ -1.91
CSDE1-208ENST00000524652 ASPHD1Q5U4P2 390 aa3.15□□□□□ -1.91
CSDE1-208ENST00000524652 ZNF324BQ6AW86 544 aaPredicted RBP3.15□□□□□ -1.91
CSDE1-208ENST00000524652 SLC39A4Q6P5W5 647 aa3.15□□□□□ -1.91
CSDE1-208ENST00000524652 CCDC73Q6ZRK6 1079 aa3.15□□□□□ -1.91
CSDE1-208ENST00000524652 RBM43Q6ZSC3 357 aaKnown RBP3.15□□□□□ -1.91
CSDE1-208ENST00000524652 BEND5Q7L4P6 421 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms