RNA–Protein interactions for RNA: ENST00000524258.2

CLN8-207, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 2

Gene CLN8, Length 835 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-207ENST00000524258 CACNB4O00305 520 aaPredicted RBP11.88□□□□□ -0.51
CLN8-207ENST00000524258 TPP1O14773 563 aa11.88□□□□□ -0.51
CLN8-207ENST00000524258 ZNF185O15231 689 aa11.88□□□□□ -0.51
CLN8-207ENST00000524258 YY2O15391 372 aa11.88□□□□□ -0.51
CLN8-207ENST00000524258 TNFSF14O43557 240 aa11.88□□□□□ -0.51
CLN8-207ENST00000524258 KIF5CO60282 957 aa11.88□□□□□ -0.51
CLN8-207ENST00000524258 DNAJC6O75061 913 aa11.88□□□□□ -0.51
CLN8-207ENST00000524258 SUN1O94901 812 aa11.88□□□□□ -0.51
CLN8-207ENST00000524258 RASGRP1O95267 797 aa11.88□□□□□ -0.51
CLN8-207ENST00000524258 TOP3BO95985 862 aaKnown RBP11.88□□□□□ -0.51
CLN8-207ENST00000524258 IVLP07476 585 aa11.88□□□□□ -0.51
CLN8-207ENST00000524258 HTR1BP28222 390 aa11.88□□□□□ -0.51
CLN8-207ENST00000524258 GRIA1P42261 906 aa11.88□□□□□ -0.51
CLN8-207ENST00000524258 GPR1P46091 355 aa11.88□□□□□ -0.51
CLN8-207ENST00000524258 SEMA5AQ13591 1074 aa11.88□□□□□ -0.51
CLN8-207ENST00000524258 PRRT3Q5FWE3 981 aa11.88□□□□□ -0.51
CLN8-207ENST00000524258 CCDC70Q6NSX1 233 aa11.88□□□□□ -0.51
CLN8-207ENST00000524258 ARHGEF18Q6ZSZ5 1173 aa11.88□□□□□ -0.51
CLN8-207ENST00000524258 TRIM74Q86UV6 250 aa11.88□□□□□ -0.51
CLN8-207ENST00000524258 HID1Q8IV36 788 aa11.88□□□□□ -0.51
CLN8-207ENST00000524258 C17orf53Q8N3J3 647 aaPredicted RBP11.88□□□□□ -0.51
CLN8-207ENST00000524258 PDCD7Q8N8D1 485 aaKnown RBP11.88□□□□□ -0.51
CLN8-207ENST00000524258 CCL4L1Q8NHW4 92 aa11.88□□□□□ -0.51
CLN8-207ENST00000524258 CCHCR1Q8TD31 782 aa11.88□□□□□ -0.51
CLN8-207ENST00000524258 LMX1AQ8TE12 382 aa11.88□□□□□ -0.51
CLN8-207ENST00000524258 BTN2A2Q8WVV5 523 aa11.88□□□□□ -0.51
CLN8-207ENST00000524258 MAIP1Q8WWC4 291 aa11.88□□□□□ -0.51
CLN8-207ENST00000524258 HIC2Q96JB3 615 aa11.88□□□□□ -0.51
CLN8-207ENST00000524258 PPP1R2P1Q96PQ5 205 aa11.88□□□□□ -0.51
CLN8-207ENST00000524258 TBL1YQ9BQ87 522 aa11.88□□□□□ -0.51
CLN8-207ENST00000524258 BOCQ9BWV1 1114 aa11.88□□□□□ -0.51
CLN8-207ENST00000524258 GPR63Q9BZJ6 419 aa11.88□□□□□ -0.51
CLN8-207ENST00000524258 CDH19Q9H159 772 aa11.88□□□□□ -0.51
CLN8-207ENST00000524258 BPIFA1Q9NP55 256 aa11.88□□□□□ -0.51
CLN8-207ENST00000524258 PHPT1Q9NRX4 125 aaPredicted RBP11.88□□□□□ -0.51
CLN8-207ENST00000524258 NLGN3Q9NZ94 848 aa11.88□□□□□ -0.51
CLN8-207ENST00000524258 HACD3Q9P035 362 aa11.88□□□□□ -0.51
CLN8-207ENST00000524258 SPASTQ9UBP0 616 aa11.88□□□□□ -0.51
CLN8-207ENST00000524258 KLQ9UEF7 1012 aa11.88□□□□□ -0.51
CLN8-207ENST00000524258 TMEM98Q9Y2Y6 226 aa11.88□□□□□ -0.51
CLN8-207ENST00000524258 ARL5AQ9Y689 179 aa11.88□□□□□ -0.51
CLN8-207ENST00000524258 ASXL3Q9C0F0 2248 aa11.88□□□□□ -0.51
CLN8-207ENST00000524258 TPRP12270 2363 aaKnown RBP11.87□□□□□ -0.51
CLN8-207ENST00000524258 KNTC1P50748 2209 aa11.87□□□□□ -0.51
CLN8-207ENST00000524258 SCN8AQ9UQD0 1980 aa11.87□□□□□ -0.51
CLN8-207ENST00000524258 LDB2O43679 373 aa11.87□□□□□ -0.51
CLN8-207ENST00000524258 BUD23O43709 281 aaKnown RBP11.87□□□□□ -0.51
CLN8-207ENST00000524258 LDOC1O95751 146 aaPredicted RBP11.87□□□□□ -0.51
CLN8-207ENST00000524258 IFNB1P01574 187 aa11.87□□□□□ -0.51
CLN8-207ENST00000524258 PYGLP06737 847 aa11.87□□□□□ -0.51
CLN8-207ENST00000524258 FTH1P19P0C7X4 201 aa11.87□□□□□ -0.51
CLN8-207ENST00000524258 MYF5P13349 255 aa11.87□□□□□ -0.51
CLN8-207ENST00000524258 KELP23276 732 aa11.87□□□□□ -0.51
CLN8-207ENST00000524258 ACADVLP49748 655 aa11.87□□□□□ -0.51
CLN8-207ENST00000524258 ZNF140P52738 457 aaPredicted RBP11.87□□□□□ -0.51
CLN8-207ENST00000524258 XIAPP98170 497 aa11.87□□□□□ -0.51
CLN8-207ENST00000524258 DNAJC3Q13217 504 aa11.87□□□□□ -0.51
CLN8-207ENST00000524258 PRPSAP1Q14558 356 aa11.87□□□□□ -0.51
CLN8-207ENST00000524258 TAF1AQ15573 450 aaPredicted RBP11.87□□□□□ -0.51
CLN8-207ENST00000524258 KHDC1Q4VXA5 237 aaKnown RBP11.87□□□□□ -0.51
CLN8-207ENST00000524258 OGFOD3Q6PK18 319 aa11.87□□□□□ -0.51
CLN8-207ENST00000524258 MICALCLQ6ZW33 695 aa11.87□□□□□ -0.51
CLN8-207ENST00000524258 RAB44Q7Z6P3 723 aaPredicted RBP11.87□□□□□ -0.51
CLN8-207ENST00000524258 CREG2Q8IUH2 290 aa11.87□□□□□ -0.51
CLN8-207ENST00000524258 SFTPA2Q8IWL1 248 aa11.87□□□□□ -0.51
CLN8-207ENST00000524258 TAB3Q8N5C8 712 aaPredicted RBP11.87□□□□□ -0.51
CLN8-207ENST00000524258 TRAM1L1Q8N609 369 aa11.87□□□□□ -0.51
CLN8-207ENST00000524258 BRSK1Q8TDC3 778 aa11.87□□□□□ -0.51
CLN8-207ENST00000524258 BLOC1S5Q8TDH9 187 aa11.87□□□□□ -0.51
CLN8-207ENST00000524258 GPBAR1Q8TDU6 330 aa11.87□□□□□ -0.51
CLN8-207ENST00000524258 CNDP2Q96KP4 475 aaKnown RBP11.87□□□□□ -0.51
CLN8-207ENST00000524258 PLEKHG4BQ96PX9 1271 aa11.87□□□□□ -0.51
CLN8-207ENST00000524258 C19orf43Q9BQ61 176 aa11.87□□□□□ -0.51
CLN8-207ENST00000524258 FSD1LQ9BXM9 530 aa11.87□□□□□ -0.51
CLN8-207ENST00000524258 TMEM168Q9H0V1 697 aa11.87□□□□□ -0.51
CLN8-207ENST00000524258 LRRC40Q9H9A6 602 aa11.87□□□□□ -0.51
CLN8-207ENST00000524258 SUFUQ9UMX1 484 aa11.87□□□□□ -0.51
CLN8-207ENST00000524258 PLEKHM1Q9Y4G2 1056 aa11.87□□□□□ -0.51
CLN8-207ENST00000524258 FRYQ5TBA9 3013 aa11.86□□□□□ -0.51
CLN8-207ENST00000524258 FAM221BA6H8Z2 402 aa11.86□□□□□ -0.51
CLN8-207ENST00000524258 PRR19A6NJB7 356 aa11.86□□□□□ -0.51
CLN8-207ENST00000524258 AGAP14A8MT82 685 aa11.86□□□□□ -0.51
CLN8-207ENST00000524258 H3BM21 787 aa11.86□□□□□ -0.51
CLN8-207ENST00000524258 PDE2AO00408 941 aaPredicted RBP11.86□□□□□ -0.51
CLN8-207ENST00000524258 INPP4BO15327 924 aa11.86□□□□□ -0.51
CLN8-207ENST00000524258 FFAR2O15552 330 aa11.86□□□□□ -0.51
CLN8-207ENST00000524258 PSMD3O43242 534 aa11.86□□□□□ -0.51
CLN8-207ENST00000524258 TNFP01375 233 aa11.86□□□□□ -0.51
CLN8-207ENST00000524258 CKMT1AP12532 417 aa11.86□□□□□ -0.51
CLN8-207ENST00000524258 CKMT2P17540 419 aa11.86□□□□□ -0.51
CLN8-207ENST00000524258 ACP1P24666 158 aa11.86□□□□□ -0.51
CLN8-207ENST00000524258 FDFT1P37268 417 aa11.86□□□□□ -0.51
CLN8-207ENST00000524258 COILP38432 576 aaPredicted RBP11.86□□□□□ -0.51
CLN8-207ENST00000524258 BLKP51451 505 aa11.86□□□□□ -0.51
CLN8-207ENST00000524258 GNG11P61952 73 aa11.86□□□□□ -0.51
CLN8-207ENST00000524258 DEFB133Q30KQ1 61 aa11.86□□□□□ -0.51
CLN8-207ENST00000524258 INAVAQ3KP66 663 aa11.86□□□□□ -0.51
CLN8-207ENST00000524258 ATP13A5Q4VNC0 1218 aa11.86□□□□□ -0.51
CLN8-207ENST00000524258 PYCR3Q53H96 274 aa11.86□□□□□ -0.51
CLN8-207ENST00000524258 ZNF648Q5T619 568 aaPredicted RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms