RNA–Protein interactions for RNA: ENST00000524115.2

NKX6-3-202, Transcript of NK6 homeobox 3, humanhuman

TSL 2 BASIC

Gene NKX6-3, Length 1,683 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-3-202ENST00000524115 MOCOSQ96EN8 888 aa22.42■■□□□ 1.18
NKX6-3-202ENST00000524115 MGME1Q9BQP7 344 aa22.42■■□□□ 1.18
NKX6-3-202ENST00000524115 EBF3Q9H4W6 596 aa22.42■■□□□ 1.18
NKX6-3-202ENST00000524115 CYP4F12Q9HCS2 524 aa22.42■■□□□ 1.18
NKX6-3-202ENST00000524115 DNMT3LQ9UJW3 386 aa22.42■■□□□ 1.18
NKX6-3-202ENST00000524115 RAB26Q9ULW5 256 aa22.42■■□□□ 1.18
NKX6-3-202ENST00000524115 NEMP2A6NFY4 417 aa22.42■■□□□ 1.18
NKX6-3-202ENST00000524115 ACSL4O60488 711 aa22.42■■□□□ 1.18
NKX6-3-202ENST00000524115 JUNP05412 331 aaKnown RBP22.42■■□□□ 1.18
NKX6-3-202ENST00000524115 CD1DP15813 335 aa22.42■■□□□ 1.18
NKX6-3-202ENST00000524115 VCLP18206 1134 aa22.42■■□□□ 1.18
NKX6-3-202ENST00000524115 PSMA3P25788 255 aa22.42■■□□□ 1.18
NKX6-3-202ENST00000524115 PEX2P28328 305 aa22.42■■□□□ 1.18
NKX6-3-202ENST00000524115 PMLP29590 882 aa22.42■■□□□ 1.18
NKX6-3-202ENST00000524115 ETFBP38117 255 aa22.42■■□□□ 1.18
NKX6-3-202ENST00000524115 ERFP50548 548 aa22.42■■□□□ 1.18
NKX6-3-202ENST00000524115 ARSDP51689 593 aa22.42■■□□□ 1.18
NKX6-3-202ENST00000524115 CDKN2DP55273 166 aa22.42■■□□□ 1.18
NKX6-3-202ENST00000524115 CEACAM7Q14002 265 aa22.42■■□□□ 1.18
NKX6-3-202ENST00000524115 GRAMD1BQ3KR37 738 aa22.42■■□□□ 1.18
NKX6-3-202ENST00000524115 SFT2D3Q587I9 215 aa22.42■■□□□ 1.18
NKX6-3-202ENST00000524115 GPR158Q5T848 1215 aa22.42■■□□□ 1.18
NKX6-3-202ENST00000524115 IRAK1BP1Q5VVH5 260 aa22.42■■□□□ 1.18
NKX6-3-202ENST00000524115 LPCAT4Q643R3 524 aa22.42■■□□□ 1.18
NKX6-3-202ENST00000524115 EFL1Q7Z2Z2 1120 aaKnown RBP22.42■■□□□ 1.18
NKX6-3-202ENST00000524115 SHKBP1Q8TBC3 707 aa22.42■■□□□ 1.18
NKX6-3-202ENST00000524115 BCL7CQ8WUZ0 217 aaPredicted RBP22.42■■□□□ 1.18
NKX6-3-202ENST00000524115 TBATAQ96M53 351 aa22.42■■□□□ 1.18
NKX6-3-202ENST00000524115 TSC22D3Q99576 134 aa22.42■■□□□ 1.18
NKX6-3-202ENST00000524115 CDCA3Q99618 268 aaPredicted RBP22.42■■□□□ 1.18
NKX6-3-202ENST00000524115 CENPKQ9BS16 269 aa22.42■■□□□ 1.18
NKX6-3-202ENST00000524115 ALG9Q9H6U8 611 aa22.42■■□□□ 1.18
NKX6-3-202ENST00000524115 CLEC1BQ9P126 229 aa22.42■■□□□ 1.18
NKX6-3-202ENST00000524115 CNOT11Q9UKZ1 510 aaKnown RBP22.42■■□□□ 1.18
NKX6-3-202ENST00000524115 BDP1A6H8Y1 2624 aa22.42■■□□□ 1.18
NKX6-3-202ENST00000524115 KIAA1671Q9BY89 1806 aa22.41■■□□□ 1.18
NKX6-3-202ENST00000524115 DENRO43583 198 aaKnown RBP22.41■■□□□ 1.18
NKX6-3-202ENST00000524115 AP1G1O43747 822 aa22.41■■□□□ 1.18
NKX6-3-202ENST00000524115 AHCYL1O43865 530 aa22.41■■□□□ 1.18
NKX6-3-202ENST00000524115 TBC1D4O60343 1298 aa22.41■■□□□ 1.18
NKX6-3-202ENST00000524115 TLR5O60602 858 aa22.41■■□□□ 1.18
NKX6-3-202ENST00000524115 SKAP2O75563 359 aaPredicted RBP22.41■■□□□ 1.18
NKX6-3-202ENST00000524115 SUPT7LO94864 414 aa22.41■■□□□ 1.18
NKX6-3-202ENST00000524115 SORBS2O94875 1100 aaKnown RBP22.41■■□□□ 1.18
NKX6-3-202ENST00000524115 XRCC1P18887 633 aaPredicted RBP22.41■■□□□ 1.18
NKX6-3-202ENST00000524115 KLHDC10Q6PID8 442 aa22.41■■□□□ 1.18
NKX6-3-202ENST00000524115 AFTPHQ6ULP2 937 aa22.41■■□□□ 1.18
NKX6-3-202ENST00000524115 LGI2Q8N0V4 545 aa22.41■■□□□ 1.18
NKX6-3-202ENST00000524115 MRPL43Q8N983 215 aaKnown RBP22.41■■□□□ 1.18
NKX6-3-202ENST00000524115 ANKRD49Q8WVL7 239 aa22.41■■□□□ 1.18
NKX6-3-202ENST00000524115 ROPN1LQ96C74 230 aa22.41■■□□□ 1.18
NKX6-3-202ENST00000524115 CYP2S1Q96SQ9 504 aa22.41■■□□□ 1.18
NKX6-3-202ENST00000524115 SEPT5Q99719 369 aaPredicted RBP22.41■■□□□ 1.18
NKX6-3-202ENST00000524115 AARSD1Q9BTE6 412 aaKnown RBP22.41■■□□□ 1.18
NKX6-3-202ENST00000524115 PFDN4Q9NQP4 134 aa22.41■■□□□ 1.18
NKX6-3-202ENST00000524115 ACSS2Q9NR19 701 aa22.41■■□□□ 1.18
NKX6-3-202ENST00000524115 NLE1Q9NVX2 485 aaPredicted RBP22.41■■□□□ 1.18
NKX6-3-202ENST00000524115 NCOR1O75376 2440 aa22.4■■□□□ 1.18
NKX6-3-202ENST00000524115 TMEM233B4DJY2 109 aa22.4■■□□□ 1.18
NKX6-3-202ENST00000524115 H0YJX3 145 aa22.4■■□□□ 1.18
NKX6-3-202ENST00000524115 TBX18O95935 607 aa22.4■■□□□ 1.18
NKX6-3-202ENST00000524115 HMBSP08397 361 aa22.4■■□□□ 1.18
NKX6-3-202ENST00000524115 UBTFL6P0CB48 400 aaPredicted RBP22.4■■□□□ 1.18
NKX6-3-202ENST00000524115 ATP5C1P36542 298 aaKnown RBP22.4■■□□□ 1.18
NKX6-3-202ENST00000524115 STC1P52823 247 aa22.4■■□□□ 1.18
NKX6-3-202ENST00000524115 GNA12Q03113 381 aa22.4■■□□□ 1.18
NKX6-3-202ENST00000524115 PDAP1Q13442 181 aaKnown RBP22.4■■□□□ 1.18
NKX6-3-202ENST00000524115 SPATS1Q496A3 300 aa22.4■■□□□ 1.18
NKX6-3-202ENST00000524115 PRMT9Q6P2P2 845 aa22.4■■□□□ 1.18
NKX6-3-202ENST00000524115 DDX53Q86TM3 631 aaKnown RBP22.4■■□□□ 1.18
NKX6-3-202ENST00000524115 PCYOX1LQ8NBM8 494 aa22.4■■□□□ 1.18
NKX6-3-202ENST00000524115 BLOC1S5Q8TDH9 187 aa22.4■■□□□ 1.18
NKX6-3-202ENST00000524115 PHF21BQ96EK2 531 aa22.4■■□□□ 1.18
NKX6-3-202ENST00000524115 MSLNLQ96KJ4 702 aa22.4■■□□□ 1.18
NKX6-3-202ENST00000524115 PSKH2Q96QS6 385 aa22.4■■□□□ 1.18
NKX6-3-202ENST00000524115 CINPQ9BW66 212 aaPredicted RBP22.4■■□□□ 1.18
NKX6-3-202ENST00000524115 CCDC68Q9H2F9 335 aa22.4■■□□□ 1.18
NKX6-3-202ENST00000524115 NDUFA13Q9P0J0 144 aa22.4■■□□□ 1.18
NKX6-3-202ENST00000524115 MARCH4Q9P2E8 410 aaPredicted RBP22.4■■□□□ 1.18
NKX6-3-202ENST00000524115 UBA2Q9UBT2 640 aaPredicted RBP22.4■■□□□ 1.18
NKX6-3-202ENST00000524115 CD207Q9UJ71 328 aa22.4■■□□□ 1.18
NKX6-3-202ENST00000524115 FAM50BQ9Y247 325 aa22.4■■□□□ 1.18
NKX6-3-202ENST00000524115 CCDC162PA2VCL2 907 aa22.39■■□□□ 1.18
NKX6-3-202ENST00000524115 EIF4E1BA6NMX2 242 aaKnown RBP22.39■■□□□ 1.18
NKX6-3-202ENST00000524115 SLC38A8A6NNN8 435 aa22.39■■□□□ 1.18
NKX6-3-202ENST00000524115 SYCE1LA8MT33 242 aa22.39■■□□□ 1.18
NKX6-3-202ENST00000524115 ACOT8O14734 319 aa22.39■■□□□ 1.18
NKX6-3-202ENST00000524115 KDELR3O43731 214 aa22.39■■□□□ 1.18
NKX6-3-202ENST00000524115 CLDN11O75508 207 aa22.39■■□□□ 1.18
NKX6-3-202ENST00000524115 CAPNS1P04632 268 aa22.39■■□□□ 1.18
NKX6-3-202ENST00000524115 FESP07332 822 aa22.39■■□□□ 1.18
NKX6-3-202ENST00000524115 CD9P21926 228 aa22.39■■□□□ 1.18
NKX6-3-202ENST00000524115 ACVRL1P37023 503 aa22.39■■□□□ 1.18
NKX6-3-202ENST00000524115 AQP4P55087 323 aa22.39■■□□□ 1.18
NKX6-3-202ENST00000524115 SH3BGRP55822 239 aaPredicted RBP22.39■■□□□ 1.18
NKX6-3-202ENST00000524115 ARPP19P56211 112 aa22.39■■□□□ 1.18
NKX6-3-202ENST00000524115 LRP8Q14114 963 aa22.39■■□□□ 1.18
NKX6-3-202ENST00000524115 TRIM25Q14258 630 aaKnown RBP22.39■■□□□ 1.18
NKX6-3-202ENST00000524115 GRM2Q14416 872 aa22.39■■□□□ 1.18
NKX6-3-202ENST00000524115 AGKQ53H12 422 aa22.39■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms