RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-223ENST00000524033 COPG1Q9Y678 874 aaKnown RBP7.84□□□□□ -1.15
SPIDR-223ENST00000524033 NUP205Q92621 2012 aa7.83□□□□□ -1.16
SPIDR-223ENST00000524033 A0A0J9YVX5 310 aa7.83□□□□□ -1.16
SPIDR-223ENST00000524033 A0A1B0GTW7 788 aa7.83□□□□□ -1.16
SPIDR-223ENST00000524033 E2F8A0AVK6 867 aa7.83□□□□□ -1.16
SPIDR-223ENST00000524033 C7orf72A4D263 438 aa7.83□□□□□ -1.16
SPIDR-223ENST00000524033 ADAM12O43184 909 aa7.83□□□□□ -1.16
SPIDR-223ENST00000524033 HCRTO43612 131 aa7.83□□□□□ -1.16
SPIDR-223ENST00000524033 PI15O43692 258 aa7.83□□□□□ -1.16
SPIDR-223ENST00000524033 NARSO43776 548 aaKnown RBP7.83□□□□□ -1.16
SPIDR-223ENST00000524033 XYLBO75191 536 aa7.83□□□□□ -1.16
SPIDR-223ENST00000524033 JUNP05412 331 aaKnown RBP7.83□□□□□ -1.16
SPIDR-223ENST00000524033 SLC35E2BP0CK96 405 aa7.83□□□□□ -1.16
SPIDR-223ENST00000524033 CCDC166P0CW27 439 aa7.83□□□□□ -1.16
SPIDR-223ENST00000524033 NPR3P17342 541 aa7.83□□□□□ -1.16
SPIDR-223ENST00000524033 IGFBP6P24592 240 aaPredicted RBP7.83□□□□□ -1.16
SPIDR-223ENST00000524033 SERPINB5P36952 375 aa7.83□□□□□ -1.16
SPIDR-223ENST00000524033 CCR10P46092 362 aa7.83□□□□□ -1.16
SPIDR-223ENST00000524033 GRIA4P48058 902 aa7.83□□□□□ -1.16
SPIDR-223ENST00000524033 HCAR3P49019 387 aa7.83□□□□□ -1.16
SPIDR-223ENST00000524033 AIF1P55008 147 aa7.83□□□□□ -1.16
SPIDR-223ENST00000524033 PKNOX1P55347 436 aa7.83□□□□□ -1.16
SPIDR-223ENST00000524033 GALNT2Q10471 571 aa7.83□□□□□ -1.16
SPIDR-223ENST00000524033 TRAP1Q12931 704 aaKnown RBP7.83□□□□□ -1.16
SPIDR-223ENST00000524033 RAB33AQ14088 237 aa7.83□□□□□ -1.16
SPIDR-223ENST00000524033 MGAT5BQ3V5L5 792 aa7.83□□□□□ -1.16
SPIDR-223ENST00000524033 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.83□□□□□ -1.16
SPIDR-223ENST00000524033 HSP90AA5PQ58FG0 334 aa7.83□□□□□ -1.16
SPIDR-223ENST00000524033 XKR4Q5GH76 650 aa7.83□□□□□ -1.16
SPIDR-223ENST00000524033 ARL13AQ5H913 290 aaPredicted RBP7.83□□□□□ -1.16
SPIDR-223ENST00000524033 GLRA4Q5JXX5 417 aa7.83□□□□□ -1.16
SPIDR-223ENST00000524033 C6orf52Q5T4I8 152 aa7.83□□□□□ -1.16
SPIDR-223ENST00000524033 LRRC8EQ6NSJ5 796 aa7.83□□□□□ -1.16
SPIDR-223ENST00000524033 HMBOX1Q6NT76 420 aa7.83□□□□□ -1.16
SPIDR-223ENST00000524033 KLC3Q6P597 504 aa7.83□□□□□ -1.16
SPIDR-223ENST00000524033 OSTM1Q86WC4 334 aa7.83□□□□□ -1.16
SPIDR-223ENST00000524033 TP53INP2Q8IXH6 220 aa7.83□□□□□ -1.16
SPIDR-223ENST00000524033 RBM12BQ8IXT5 1001 aaKnown RBP7.83□□□□□ -1.16
SPIDR-223ENST00000524033 NUP93Q8N1F7 819 aa7.83□□□□□ -1.16
SPIDR-223ENST00000524033 BHLHE22Q8NFJ8 381 aaPredicted RBP7.83□□□□□ -1.16
SPIDR-223ENST00000524033 KCTD4Q8WVF5 259 aa7.83□□□□□ -1.16
SPIDR-223ENST00000524033 KCTD13Q8WZ19 329 aa7.83□□□□□ -1.16
SPIDR-223ENST00000524033 SLCO4A1Q96BD0 722 aa7.83□□□□□ -1.16
SPIDR-223ENST00000524033 PPP1R14BQ96C90 147 aa7.83□□□□□ -1.16
SPIDR-223ENST00000524033 ASB9Q96DX5 294 aa7.83□□□□□ -1.16
SPIDR-223ENST00000524033 LRGUKQ96M69 825 aa7.83□□□□□ -1.16
SPIDR-223ENST00000524033 BIRC8Q96P09 236 aa7.83□□□□□ -1.16
SPIDR-223ENST00000524033 TSGA13Q96PP4 275 aa7.83□□□□□ -1.16
SPIDR-223ENST00000524033 KIFC1Q9BW19 673 aa7.83□□□□□ -1.16
SPIDR-223ENST00000524033 BRD8Q9H0E9 1235 aa7.83□□□□□ -1.16
SPIDR-223ENST00000524033 PREBQ9HCU5 417 aa7.83□□□□□ -1.16
SPIDR-223ENST00000524033 SLC38A7Q9NVC3 462 aa7.83□□□□□ -1.16
SPIDR-223ENST00000524033 GDAP2Q9NXN4 497 aa7.83□□□□□ -1.16
SPIDR-223ENST00000524033 BFARQ9NZS9 450 aa7.83□□□□□ -1.16
SPIDR-223ENST00000524033 TUBGCP4Q9UGJ1 667 aa7.83□□□□□ -1.16
SPIDR-223ENST00000524033 CD300AQ9UGN4 299 aa7.83□□□□□ -1.16
SPIDR-223ENST00000524033 ZNHIT2Q9UHR6 403 aa7.83□□□□□ -1.16
SPIDR-223ENST00000524033 IPO11Q9UI26 975 aaKnown RBP7.83□□□□□ -1.16
SPIDR-223ENST00000524033 ZDHHC2Q9UIJ5 367 aa7.83□□□□□ -1.16
SPIDR-223ENST00000524033 ZFP37Q9Y6Q3 630 aaPredicted RBP7.83□□□□□ -1.16
SPIDR-223ENST00000524033 GOLGA8QA0A0J9YX86 632 aa7.82□□□□□ -1.16
SPIDR-223ENST00000524033 MYOCOSA0A1B0GUC4 107 aa7.82□□□□□ -1.16
SPIDR-223ENST00000524033 ARHGAP10A1A4S6 786 aa7.82□□□□□ -1.16
SPIDR-223ENST00000524033 MAGEB16A2A368 324 aa7.82□□□□□ -1.16
SPIDR-223ENST00000524033 GOLGA8OA6NCC3 632 aa7.82□□□□□ -1.16
SPIDR-223ENST00000524033 ANHXE9PGG2 379 aa7.82□□□□□ -1.16
SPIDR-223ENST00000524033 GOLGA8NF8WBI6 632 aa7.82□□□□□ -1.16
SPIDR-223ENST00000524033 H3BNH8 94 aa7.82□□□□□ -1.16
SPIDR-223ENST00000524033 TGFBR3LH3BV60 316 aa7.82□□□□□ -1.16
SPIDR-223ENST00000524033 TMEM189-UBE2V1I3L0A0 370 aa7.82□□□□□ -1.16
SPIDR-223ENST00000524033 I6L893 689 aaPredicted RBP7.82□□□□□ -1.16
SPIDR-223ENST00000524033 PIRO00625 290 aa7.82□□□□□ -1.16
SPIDR-223ENST00000524033 FBP2O00757 339 aa7.82□□□□□ -1.16
SPIDR-223ENST00000524033 TNFRSF10BO14763 440 aa7.82□□□□□ -1.16
SPIDR-223ENST00000524033 CCL16O15467 120 aa7.82□□□□□ -1.16
SPIDR-223ENST00000524033 PSMD3O43242 534 aa7.82□□□□□ -1.16
SPIDR-223ENST00000524033 MTSS1O43312 755 aa7.82□□□□□ -1.16
SPIDR-223ENST00000524033 DLX3O60479 287 aa7.82□□□□□ -1.16
SPIDR-223ENST00000524033 BMP10O95393 424 aa7.82□□□□□ -1.16
SPIDR-223ENST00000524033 C8AP07357 584 aa7.82□□□□□ -1.16
SPIDR-223ENST00000524033 F7P08709 466 aaPredicted RBP7.82□□□□□ -1.16
SPIDR-223ENST00000524033 FAM200BP0CF97 657 aa7.82□□□□□ -1.16
SPIDR-223ENST00000524033 SRFP11831 508 aa7.82□□□□□ -1.16
SPIDR-223ENST00000524033 LCP1P13796 627 aa7.82□□□□□ -1.16
SPIDR-223ENST00000524033 ENO3P13929 434 aaPredicted RBP7.82□□□□□ -1.16
SPIDR-223ENST00000524033 KCNE1P15382 129 aa7.82□□□□□ -1.16
SPIDR-223ENST00000524033 PTPN1P18031 435 aaKnown RBP7.82□□□□□ -1.16
SPIDR-223ENST00000524033 ERCC2P18074 760 aa7.82□□□□□ -1.16
SPIDR-223ENST00000524033 CDH2P19022 906 aaPredicted RBP7.82□□□□□ -1.16
SPIDR-223ENST00000524033 TFEBP19484 476 aa7.82□□□□□ -1.16
SPIDR-223ENST00000524033 FGFR3P22607 806 aa7.82□□□□□ -1.16
SPIDR-223ENST00000524033 WARSP23381 471 aaKnown RBP7.82□□□□□ -1.16
SPIDR-223ENST00000524033 NMBRP28336 390 aa7.82□□□□□ -1.16
SPIDR-223ENST00000524033 GABRB3P28472 473 aa7.82□□□□□ -1.16
SPIDR-223ENST00000524033 PCSK6P29122 969 aa7.82□□□□□ -1.16
SPIDR-223ENST00000524033 ADORA2BP29275 332 aa7.82□□□□□ -1.16
SPIDR-223ENST00000524033 HOXA9P31269 272 aa7.82□□□□□ -1.16
SPIDR-223ENST00000524033 RPL9P32969 192 aaKnown RBP7.82□□□□□ -1.16
SPIDR-223ENST00000524033 CDK9P50750 372 aaKnown RBP7.82□□□□□ -1.16
SPIDR-223ENST00000524033 ATP4BP51164 291 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms