RNA–Protein interactions for RNA: ENST00000523483.5

SDCBP-212, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-212ENST00000523483 FMO4P31512 558 aa9.31□□□□□ -0.92
SDCBP-212ENST00000523483 MMP12P39900 470 aa9.31□□□□□ -0.92
SDCBP-212ENST00000523483 GP5P40197 560 aa9.31□□□□□ -0.92
SDCBP-212ENST00000523483 SEMA3AQ14563 771 aa9.31□□□□□ -0.92
SDCBP-212ENST00000523483 ZNF460Q14592 562 aa9.31□□□□□ -0.92
SDCBP-212ENST00000523483 USP10Q14694 798 aaKnown RBP9.31□□□□□ -0.92
SDCBP-212ENST00000523483 TTMPQ5BVD1 217 aa9.31□□□□□ -0.92
SDCBP-212ENST00000523483 ZNF648Q5T619 568 aaPredicted RBP9.31□□□□□ -0.92
SDCBP-212ENST00000523483 LIPIQ6XZB0 460 aa9.31□□□□□ -0.92
SDCBP-212ENST00000523483 ZNF398Q8TD17 642 aa9.31□□□□□ -0.92
SDCBP-212ENST00000523483 CALML6Q8TD86 181 aa9.31□□□□□ -0.92
SDCBP-212ENST00000523483 GABRG3Q99928 467 aa9.31□□□□□ -0.92
SDCBP-212ENST00000523483 FAM167BQ9BTA0 163 aa9.31□□□□□ -0.92
SDCBP-212ENST00000523483 PCMTD2Q9NV79 361 aa9.31□□□□□ -0.92
SDCBP-212ENST00000523483 MOSPD1Q9UJG1 213 aa9.31□□□□□ -0.92
SDCBP-212ENST00000523483 CXorf51AA0A1B0GTR3 108 aa9.31□□□□□ -0.92
SDCBP-212ENST00000523483 PHGDHO43175 533 aaKnown RBP9.31□□□□□ -0.92
SDCBP-212ENST00000523483 SLC7A4O43246 635 aa9.31□□□□□ -0.92
SDCBP-212ENST00000523483 PCCBP05166 539 aa9.31□□□□□ -0.92
SDCBP-212ENST00000523483 KRT4P19013 534 aa9.31□□□□□ -0.92
SDCBP-212ENST00000523483 GCAP28676 217 aa9.31□□□□□ -0.92
SDCBP-212ENST00000523483 TYK2P29597 1187 aa9.31□□□□□ -0.92
SDCBP-212ENST00000523483 ACSL1P33121 698 aa9.31□□□□□ -0.92
SDCBP-212ENST00000523483 SPINT3P49223 89 aa9.31□□□□□ -0.92
SDCBP-212ENST00000523483 ATP13A5Q4VNC0 1218 aa9.31□□□□□ -0.92
SDCBP-212ENST00000523483 SPDYCQ5MJ68 293 aa9.31□□□□□ -0.92
SDCBP-212ENST00000523483 PIP5KL1Q5T9C9 394 aa9.31□□□□□ -0.92
SDCBP-212ENST00000523483 DOK6Q6PKX4 331 aa9.31□□□□□ -0.92
SDCBP-212ENST00000523483 NAPRTQ6XQN6 538 aa9.31□□□□□ -0.92
SDCBP-212ENST00000523483 TAOK1Q7L7X3 1001 aa9.31□□□□□ -0.92
SDCBP-212ENST00000523483 FRMD1Q8N878 549 aa9.31□□□□□ -0.92
SDCBP-212ENST00000523483 VPS39Q96JC1 886 aa9.31□□□□□ -0.92
SDCBP-212ENST00000523483 MCCC1Q96RQ3 725 aaPredicted RBP9.31□□□□□ -0.92
SDCBP-212ENST00000523483 RANBP9Q96S59 729 aa9.31□□□□□ -0.92
SDCBP-212ENST00000523483 WNT9AO14904 365 aa9.3□□□□□ -0.92
SDCBP-212ENST00000523483 SCAMP1O15126 338 aa9.3□□□□□ -0.92
SDCBP-212ENST00000523483 ASMTLO95671 621 aa9.3□□□□□ -0.92
SDCBP-212ENST00000523483 ITGA2BP08514 1039 aa9.3□□□□□ -0.92
SDCBP-212ENST00000523483 GSTA2P09210 222 aa9.3□□□□□ -0.92
SDCBP-212ENST00000523483 GABRG2P18507 467 aa9.3□□□□□ -0.92
SDCBP-212ENST00000523483 SPRP35270 261 aaPredicted RBP9.3□□□□□ -0.92
SDCBP-212ENST00000523483 CD151P48509 253 aa9.3□□□□□ -0.92
SDCBP-212ENST00000523483 CCDC15Q0P6D6 951 aa9.3□□□□□ -0.92
SDCBP-212ENST00000523483 SGCGQ13326 291 aa9.3□□□□□ -0.92
SDCBP-212ENST00000523483 PEX6Q13608 980 aa9.3□□□□□ -0.92
SDCBP-212ENST00000523483 SEPT7Q16181 437 aaKnown RBP9.3□□□□□ -0.92
SDCBP-212ENST00000523483 AGBL4Q5VU57 503 aa9.3□□□□□ -0.92
SDCBP-212ENST00000523483 TTC19Q6DKK2 380 aaPredicted RBP9.3□□□□□ -0.92
SDCBP-212ENST00000523483 SERPINA9Q86WD7 417 aa9.3□□□□□ -0.92
SDCBP-212ENST00000523483 CILP2Q8IUL8 1156 aa9.3□□□□□ -0.92
SDCBP-212ENST00000523483 UBALD2Q8IYN6 164 aa9.3□□□□□ -0.92
SDCBP-212ENST00000523483 SPATA6LQ8N4H0 392 aa9.3□□□□□ -0.92
SDCBP-212ENST00000523483 ACVR1CQ8NER5 493 aa9.3□□□□□ -0.92
SDCBP-212ENST00000523483 DCAKDQ8WVC6 231 aa9.3□□□□□ -0.92
SDCBP-212ENST00000523483 CCDC97Q96F63 343 aaPredicted RBP9.3□□□□□ -0.92
SDCBP-212ENST00000523483 ATP6V1G3Q96LB4 118 aa9.3□□□□□ -0.92
SDCBP-212ENST00000523483 TMBIM4Q9HC24 238 aa9.3□□□□□ -0.92
SDCBP-212ENST00000523483 MRM3Q9HC36 420 aaKnown RBP9.3□□□□□ -0.92
SDCBP-212ENST00000523483 DKK3Q9UBP4 350 aa9.3□□□□□ -0.92
SDCBP-212ENST00000523483 MTO1Q9Y2Z2 717 aaKnown RBP9.3□□□□□ -0.92
SDCBP-212ENST00000523483 IQCF5A8MTL0 148 aa9.3□□□□□ -0.92
SDCBP-212ENST00000523483 ATP8B1O43520 1251 aa9.3□□□□□ -0.92
SDCBP-212ENST00000523483 ALDH1A2O94788 518 aa9.3□□□□□ -0.92
SDCBP-212ENST00000523483 PAPSS2O95340 614 aaPredicted RBP9.3□□□□□ -0.92
SDCBP-212ENST00000523483 TOP3BO95985 862 aaKnown RBP9.3□□□□□ -0.92
SDCBP-212ENST00000523483 SNRPAP09012 282 aaKnown RBP9.3□□□□□ -0.92
SDCBP-212ENST00000523483 TSSK4Q6SA08 328 aa9.3□□□□□ -0.92
SDCBP-212ENST00000523483 MARK2Q7KZI7 788 aaKnown RBP9.3□□□□□ -0.92
SDCBP-212ENST00000523483 SLC41A1Q8IVJ1 513 aa9.3□□□□□ -0.92
SDCBP-212ENST00000523483 MSANTD3Q96H12 275 aa9.3□□□□□ -0.92
SDCBP-212ENST00000523483 UHRF1Q96T88 793 aaPredicted RBP9.3□□□□□ -0.92
SDCBP-212ENST00000523483 CPNE1Q99829 537 aa9.3□□□□□ -0.92
SDCBP-212ENST00000523483 BOCQ9BWV1 1114 aa9.3□□□□□ -0.92
SDCBP-212ENST00000523483 ROPN1BQ9BZX4 212 aaPredicted RBP9.3□□□□□ -0.92
SDCBP-212ENST00000523483 IQCGQ9H095 443 aaKnown RBP9.3□□□□□ -0.92
SDCBP-212ENST00000523483 ROPN1Q9HAT0 212 aaPredicted RBP9.3□□□□□ -0.92
SDCBP-212ENST00000523483 SLC24A2Q9UI40 661 aa9.3□□□□□ -0.92
SDCBP-212ENST00000523483 APPL1Q9UKG1 709 aa9.3□□□□□ -0.92
SDCBP-212ENST00000523483 A0A1W2PQU0 124 aa9.3□□□□□ -0.92
SDCBP-212ENST00000523483 K7ESM1 405 aa9.3□□□□□ -0.92
SDCBP-212ENST00000523483 PYGBP11216 843 aa9.3□□□□□ -0.92
SDCBP-212ENST00000523483 BRAFP15056 766 aa9.3□□□□□ -0.92
SDCBP-212ENST00000523483 TSHRP16473 764 aa9.3□□□□□ -0.92
SDCBP-212ENST00000523483 CHRM3P20309 590 aa9.3□□□□□ -0.92
SDCBP-212ENST00000523483 GPR1P46091 355 aa9.3□□□□□ -0.92
SDCBP-212ENST00000523483 TPMTP51580 245 aa9.3□□□□□ -0.92
SDCBP-212ENST00000523483 RALGDSQ12967 914 aa9.3□□□□□ -0.92
SDCBP-212ENST00000523483 MTAPQ13126 283 aa9.3□□□□□ -0.92
SDCBP-212ENST00000523483 NFATC2Q13469 925 aa9.3□□□□□ -0.92
SDCBP-212ENST00000523483 PPM1JQ5JR12 505 aa9.3□□□□□ -0.92
SDCBP-212ENST00000523483 RBM20Q5T481 1227 aaKnown RBP9.3□□□□□ -0.92
SDCBP-212ENST00000523483 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.3□□□□□ -0.92
SDCBP-212ENST00000523483 DCLK2Q8N568 766 aa9.3□□□□□ -0.92
SDCBP-212ENST00000523483 CCDC63Q8NA47 563 aa9.3□□□□□ -0.92
SDCBP-212ENST00000523483 SMC6Q96SB8 1091 aa9.3□□□□□ -0.92
SDCBP-212ENST00000523483 BTBD1Q9H0C5 482 aa9.3□□□□□ -0.92
SDCBP-212ENST00000523483 C12orf65Q9H3J6 166 aaKnown RBP9.3□□□□□ -0.92
SDCBP-212ENST00000523483 FADS3Q9Y5Q0 445 aa9.3□□□□□ -0.92
SDCBP-212ENST00000523483 MYLKQ15746 1914 aa9.3□□□□□ -0.92
SDCBP-212ENST00000523483 FAM95CA0A1B0GW59 222 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms