RNA–Protein interactions for RNA: ENST00000522963.5

PVT1-215, Transcript of Pvt1 oncogene, humanhuman

TSL 4

Gene PVT1, Length 568 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-215ENST00000522963 TP53BP1Q12888 1972 aaPredicted RBP11.89□□□□□ -0.51
PVT1-215ENST00000522963 CABIN1Q9Y6J0 2220 aa11.89□□□□□ -0.51
PVT1-215ENST00000522963 FAM237BA0A1B0GVD1 139 aa11.89□□□□□ -0.51
PVT1-215ENST00000522963 MAGEB16A2A368 324 aa11.89□□□□□ -0.51
PVT1-215ENST00000522963 C10orf142B7Z368 130 aa11.89□□□□□ -0.51
PVT1-215ENST00000522963 PSMD11O00231 422 aa11.89□□□□□ -0.51
PVT1-215ENST00000522963 CCL22O00626 93 aa11.89□□□□□ -0.51
PVT1-215ENST00000522963 ARHGAP33O14559 1287 aa11.89□□□□□ -0.51
PVT1-215ENST00000522963 WNT9AO14904 365 aa11.89□□□□□ -0.51
PVT1-215ENST00000522963 STX7O15400 261 aaKnown RBP11.89□□□□□ -0.51
PVT1-215ENST00000522963 BPIP17213 487 aa11.89□□□□□ -0.51
PVT1-215ENST00000522963 MCM3P25205 808 aa11.89□□□□□ -0.51
PVT1-215ENST00000522963 PSMA3P25788 255 aa11.89□□□□□ -0.51
PVT1-215ENST00000522963 NMBRP28336 390 aa11.89□□□□□ -0.51
PVT1-215ENST00000522963 HMGCLP35914 325 aa11.89□□□□□ -0.51
PVT1-215ENST00000522963 ETV3P41162 512 aa11.89□□□□□ -0.51
PVT1-215ENST00000522963 MAGEA4P43358 317 aa11.89□□□□□ -0.51
PVT1-215ENST00000522963 SPINT3P49223 89 aa11.89□□□□□ -0.51
PVT1-215ENST00000522963 AFF3P51826 1226 aaKnown RBP11.89□□□□□ -0.51
PVT1-215ENST00000522963 C21orf59P57076 290 aa11.89□□□□□ -0.51
PVT1-215ENST00000522963 TMPRSS15P98073 1019 aa11.89□□□□□ -0.51
PVT1-215ENST00000522963 GRIK2Q13002 908 aa11.89□□□□□ -0.51
PVT1-215ENST00000522963 LAMB3Q13751 1172 aa11.89□□□□□ -0.51
PVT1-215ENST00000522963 FGL2Q14314 439 aa11.89□□□□□ -0.51
PVT1-215ENST00000522963 ACOX1Q15067 660 aa11.89□□□□□ -0.51
PVT1-215ENST00000522963 ANKRD20A4Q4UJ75 823 aa11.89□□□□□ -0.51
PVT1-215ENST00000522963 TMEM259Q4ZIN3 620 aa11.89□□□□□ -0.51
PVT1-215ENST00000522963 SETMARQ53H47 684 aaPredicted RBP11.89□□□□□ -0.51
PVT1-215ENST00000522963 ARMC3Q5W041 872 aa11.89□□□□□ -0.51
PVT1-215ENST00000522963 KIAA1161Q6NSJ0 714 aa11.89□□□□□ -0.51
PVT1-215ENST00000522963 ESRP1Q6NXG1 681 aaKnown RBP11.89□□□□□ -0.51
PVT1-215ENST00000522963 NEK5Q6P3R8 708 aa11.89□□□□□ -0.51
PVT1-215ENST00000522963 Q6ZVL8 140 aa11.89□□□□□ -0.51
PVT1-215ENST00000522963 TECPR1Q7Z6L1 1165 aa11.89□□□□□ -0.51
PVT1-215ENST00000522963 TRIM69Q86WT6 500 aa11.89□□□□□ -0.51
PVT1-215ENST00000522963 MINDY1Q8N5J2 469 aa11.89□□□□□ -0.51
PVT1-215ENST00000522963 OR4K2Q8NGD2 314 aa11.89□□□□□ -0.51
PVT1-215ENST00000522963 OR13J1Q8NGT2 312 aa11.89□□□□□ -0.51
PVT1-215ENST00000522963 PYROXD1Q8WU10 500 aa11.89□□□□□ -0.51
PVT1-215ENST00000522963 STYXQ8WUJ0 223 aa11.89□□□□□ -0.51
PVT1-215ENST00000522963 MFSD3Q96ES6 412 aa11.89□□□□□ -0.51
PVT1-215ENST00000522963 C9orf72Q96LT7 481 aa11.89□□□□□ -0.51
PVT1-215ENST00000522963 FCRL3Q96P31 734 aaPredicted RBP11.89□□□□□ -0.51
PVT1-215ENST00000522963 TREX1Q9NSU2 369 aa11.89□□□□□ -0.51
PVT1-215ENST00000522963 ZC3H7BQ9UGR2 993 aaKnown RBP11.89□□□□□ -0.51
PVT1-215ENST00000522963 RIMKLBQ9ULI2 386 aa11.89□□□□□ -0.51
PVT1-215ENST00000522963 TDRD6O60522 2096 aaKnown RBP11.88□□□□□ -0.51
PVT1-215ENST00000522963 DMDP11532 3685 aa11.88□□□□□ -0.51
PVT1-215ENST00000522963 DCDC2BA2VCK2 349 aa11.88□□□□□ -0.51
PVT1-215ENST00000522963 LZTS3O60299 673 aaPredicted RBP11.88□□□□□ -0.51
PVT1-215ENST00000522963 TM7SF2O76062 418 aa11.88□□□□□ -0.51
PVT1-215ENST00000522963 RECQL5O94762 991 aaPredicted RBP11.88□□□□□ -0.51
PVT1-215ENST00000522963 TUBBP07437 444 aa11.88□□□□□ -0.51
PVT1-215ENST00000522963 PGAM1P18669 254 aa11.88□□□□□ -0.51
PVT1-215ENST00000522963 CD38P28907 300 aa11.88□□□□□ -0.51
PVT1-215ENST00000522963 ARSDP51689 593 aa11.88□□□□□ -0.51
PVT1-215ENST00000522963 RPS21P63220 83 aaKnown RBP11.88□□□□□ -0.51
PVT1-215ENST00000522963 RACK1P63244 317 aaKnown RBP11.88□□□□□ -0.51
PVT1-215ENST00000522963 PDE1BQ01064 536 aa11.88□□□□□ -0.51
PVT1-215ENST00000522963 ACVR1Q04771 509 aa11.88□□□□□ -0.51
PVT1-215ENST00000522963 SGCGQ13326 291 aa11.88□□□□□ -0.51
PVT1-215ENST00000522963 STAT4Q14765 748 aa11.88□□□□□ -0.51
PVT1-215ENST00000522963 SKIDA1Q1XH10 827 aa11.88□□□□□ -0.51
PVT1-215ENST00000522963 KIF19Q2TAC6 998 aa11.88□□□□□ -0.51
PVT1-215ENST00000522963 ZNF284Q2VY69 593 aa11.88□□□□□ -0.51
PVT1-215ENST00000522963 UBAP2Q5T6F2 1119 aaKnown RBP11.88□□□□□ -0.51
PVT1-215ENST00000522963 STEAP4Q687X5 459 aa11.88□□□□□ -0.51
PVT1-215ENST00000522963 UNC5AQ6ZN44 842 aa11.88□□□□□ -0.51
PVT1-215ENST00000522963 CEP128Q6ZU80 1094 aa11.88□□□□□ -0.51
PVT1-215ENST00000522963 NLRP9Q7RTR0 991 aa11.88□□□□□ -0.51
PVT1-215ENST00000522963 TMEM135Q86UB9 458 aa11.88□□□□□ -0.51
PVT1-215ENST00000522963 RELL1Q8IUW5 271 aa11.88□□□□□ -0.51
PVT1-215ENST00000522963 GPR26Q8NDV2 337 aa11.88□□□□□ -0.51
PVT1-215ENST00000522963 C1orf216Q8TAB5 229 aa11.88□□□□□ -0.51
PVT1-215ENST00000522963 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.88□□□□□ -0.51
PVT1-215ENST00000522963 ZNF669Q96BR6 464 aaPredicted RBP11.88□□□□□ -0.51
PVT1-215ENST00000522963 DTD2Q96FN9 168 aa11.88□□□□□ -0.51
PVT1-215ENST00000522963 CFAP36Q96G28 342 aa11.88□□□□□ -0.51
PVT1-215ENST00000522963 ORAI3Q9BRQ5 295 aa11.88□□□□□ -0.51
PVT1-215ENST00000522963 NAT9Q9BTE0 207 aa11.88□□□□□ -0.51
PVT1-215ENST00000522963 C1QTNF2Q9BXJ5 285 aa11.88□□□□□ -0.51
PVT1-215ENST00000522963 TXLNGYQ9BZA5 131 aa11.88□□□□□ -0.51
PVT1-215ENST00000522963 TSPYL1Q9H0U9 437 aa11.88□□□□□ -0.51
PVT1-215ENST00000522963 NLE1Q9NVX2 485 aaPredicted RBP11.88□□□□□ -0.51
PVT1-215ENST00000522963 PKD2L2Q9NZM6 624 aa11.88□□□□□ -0.51
PVT1-215ENST00000522963 CD84Q9UIB8 345 aa11.88□□□□□ -0.51
PVT1-215ENST00000522963 FKBPLQ9UIM3 349 aa11.88□□□□□ -0.51
PVT1-215ENST00000522963 PKP3Q9Y446 797 aa11.88□□□□□ -0.51
PVT1-215ENST00000522963 SNX11Q9Y5W9 270 aa11.88□□□□□ -0.51
PVT1-215ENST00000522963 RPS6KL1Q9Y6S9 549 aa11.88□□□□□ -0.51
PVT1-215ENST00000522963 PCDH15Q96QU1 1955 aa11.88□□□□□ -0.51
PVT1-215ENST00000522963 WDR87Q6ZQQ6 2873 aa11.88□□□□□ -0.51
PVT1-215ENST00000522963 CNOT1A5YKK6 2376 aaKnown RBP11.87□□□□□ -0.51
PVT1-215ENST00000522963 ZCWPW2A0A1B0GU75 182 aa11.87□□□□□ -0.51
PVT1-215ENST00000522963 RGSL1A5PLK6 1076 aa11.87□□□□□ -0.51
PVT1-215ENST00000522963 CDX4O14627 284 aaPredicted RBP11.87□□□□□ -0.51
PVT1-215ENST00000522963 SLC30A4O14863 429 aa11.87□□□□□ -0.51
PVT1-215ENST00000522963 LATO43561 262 aa11.87□□□□□ -0.51
PVT1-215ENST00000522963 USP1O94782 785 aa11.87□□□□□ -0.51
PVT1-215ENST00000522963 PAK4O96013 591 aaPredicted RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms