RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 MDFIQ99750 246 aa8.83□□□□□ -1
TRAPPC9-212ENST00000521944 TRIM62Q9BVG3 475 aa8.83□□□□□ -1
TRAPPC9-212ENST00000521944 GSDMCQ9BYG8 508 aa8.83□□□□□ -1
TRAPPC9-212ENST00000521944 TKTL2Q9H0I9 626 aa8.83□□□□□ -1
TRAPPC9-212ENST00000521944 LHX9Q9NQ69 397 aa8.83□□□□□ -1
TRAPPC9-212ENST00000521944 TRNAU1APQ9NX07 287 aaKnown RBP8.83□□□□□ -1
TRAPPC9-212ENST00000521944 COPG2Q9UBF2 871 aa8.83□□□□□ -1
TRAPPC9-212ENST00000521944 KLHL3Q9UH77 587 aa8.83□□□□□ -1
TRAPPC9-212ENST00000521944 MOSPD1Q9UJG1 213 aa8.83□□□□□ -1
TRAPPC9-212ENST00000521944 PADI1Q9ULC6 663 aa8.83□□□□□ -1
TRAPPC9-212ENST00000521944 SUFUQ9UMX1 484 aa8.83□□□□□ -1
TRAPPC9-212ENST00000521944 SMC3Q9UQE7 1217 aa8.83□□□□□ -1
TRAPPC9-212ENST00000521944 OSGIN2Q9Y236 505 aa8.83□□□□□ -1
TRAPPC9-212ENST00000521944 MFHAS1Q9Y4C4 1052 aa8.83□□□□□ -1
TRAPPC9-212ENST00000521944 PCDHB4Q9Y5E5 795 aa8.83□□□□□ -1
TRAPPC9-212ENST00000521944 KLF2Q9Y5W3 355 aaPredicted RBP8.83□□□□□ -1
TRAPPC9-212ENST00000521944 FBN1P35555 2871 aaKnown RBP8.83□□□□□ -1
TRAPPC9-212ENST00000521944 MN1Q10571 1320 aaPredicted RBP8.82□□□□□ -1
TRAPPC9-212ENST00000521944 CXorf51AA0A1B0GTR3 108 aa8.82□□□□□ -1
TRAPPC9-212ENST00000521944 TSPAN11A1L157 253 aa8.82□□□□□ -1
TRAPPC9-212ENST00000521944 A6NL46 340 aa8.82□□□□□ -1
TRAPPC9-212ENST00000521944 NDUFA10O95299 355 aa8.82□□□□□ -1
TRAPPC9-212ENST00000521944 PIGNO95427 931 aa8.82□□□□□ -1
TRAPPC9-212ENST00000521944 NADKO95544 446 aaPredicted RBP8.82□□□□□ -1
TRAPPC9-212ENST00000521944 SPTBP11277 2137 aa8.82□□□□□ -1
TRAPPC9-212ENST00000521944 PTPN4P29074 926 aa8.82□□□□□ -1
TRAPPC9-212ENST00000521944 ADCY8P40145 1251 aa8.82□□□□□ -1
TRAPPC9-212ENST00000521944 GARSP41250 739 aaKnown RBP8.82□□□□□ -1
TRAPPC9-212ENST00000521944 GNPDA1P46926 289 aa8.82□□□□□ -1
TRAPPC9-212ENST00000521944 POLD2P49005 469 aa8.82□□□□□ -1
TRAPPC9-212ENST00000521944 HDAC4P56524 1084 aa8.82□□□□□ -1
TRAPPC9-212ENST00000521944 YWHAEP62258 255 aaKnown RBP8.82□□□□□ -1
TRAPPC9-212ENST00000521944 SNRPD1P62314 119 aaKnown RBP8.82□□□□□ -1
TRAPPC9-212ENST00000521944 FOXM1Q08050 763 aa8.82□□□□□ -1
TRAPPC9-212ENST00000521944 ILF3Q12906 894 aaKnown RBP eCLIP8.82□□□□□ -1
TRAPPC9-212ENST00000521944 STILQ15468 1287 aa8.82□□□□□ -1
TRAPPC9-212ENST00000521944 SMTNL2Q2TAL5 461 aa8.82□□□□□ -1
TRAPPC9-212ENST00000521944 FAM69BQ5VUD6 431 aa8.82□□□□□ -1
TRAPPC9-212ENST00000521944 PNCKQ6P2M8 343 aa8.82□□□□□ -1
TRAPPC9-212ENST00000521944 KCNMB4Q86W47 210 aa8.82□□□□□ -1
TRAPPC9-212ENST00000521944 SFRP1Q8N474 314 aa8.82□□□□□ -1
TRAPPC9-212ENST00000521944 OR10G6Q8NH81 332 aa8.82□□□□□ -1
TRAPPC9-212ENST00000521944 SLC37A2Q8TED4 501 aa8.82□□□□□ -1
TRAPPC9-212ENST00000521944 STAMBPL1Q96FJ0 436 aa8.82□□□□□ -1
TRAPPC9-212ENST00000521944 SCARF2Q96GP6 870 aaPredicted RBP8.82□□□□□ -1
TRAPPC9-212ENST00000521944 ELMO2Q96JJ3 720 aa8.82□□□□□ -1
TRAPPC9-212ENST00000521944 FRMD8Q9BZ67 464 aaPredicted RBP8.82□□□□□ -1
TRAPPC9-212ENST00000521944 TTYH3Q9C0H2 523 aa8.82□□□□□ -1
TRAPPC9-212ENST00000521944 BRD8Q9H0E9 1235 aa8.82□□□□□ -1
TRAPPC9-212ENST00000521944 MAGEF1Q9HAY2 307 aa8.82□□□□□ -1
TRAPPC9-212ENST00000521944 ACP6Q9NPH0 428 aa8.82□□□□□ -1
TRAPPC9-212ENST00000521944 MAPK8IP1Q9UQF2 711 aa8.82□□□□□ -1
TRAPPC9-212ENST00000521944 B3GNT3Q9Y2A9 372 aa8.82□□□□□ -1
TRAPPC9-212ENST00000521944 COPG1Q9Y678 874 aaKnown RBP8.82□□□□□ -1
TRAPPC9-212ENST00000521944 C21orf140B9A014 251 aa8.81□□□□□ -1
TRAPPC9-212ENST00000521944 ZNF185O15231 689 aa8.81□□□□□ -1
TRAPPC9-212ENST00000521944 TEX33O43247 280 aa8.81□□□□□ -1
TRAPPC9-212ENST00000521944 SRGAP2O75044 1071 aa8.81□□□□□ -1
TRAPPC9-212ENST00000521944 SPAG6O75602 509 aa8.81□□□□□ -1
TRAPPC9-212ENST00000521944 GLI1P08151 1106 aa8.81□□□□□ -1
TRAPPC9-212ENST00000521944 STSP08842 583 aa8.81□□□□□ -1
TRAPPC9-212ENST00000521944 ANKRD34CP0C6C1 535 aa8.81□□□□□ -1
TRAPPC9-212ENST00000521944 BPIP17213 487 aa8.81□□□□□ -1
TRAPPC9-212ENST00000521944 LPOP22079 712 aaPredicted RBP8.81□□□□□ -1
TRAPPC9-212ENST00000521944 KELP23276 732 aa8.81□□□□□ -1
TRAPPC9-212ENST00000521944 GFERP55789 205 aa8.81□□□□□ -1
TRAPPC9-212ENST00000521944 ELP6Q0PNE2 266 aa8.81□□□□□ -1
TRAPPC9-212ENST00000521944 MTA1Q13330 715 aa8.81□□□□□ -1
TRAPPC9-212ENST00000521944 PDCLQ13371 301 aa8.81□□□□□ -1
TRAPPC9-212ENST00000521944 RAPSNQ13702 412 aa8.81□□□□□ -1
TRAPPC9-212ENST00000521944 ZNF630Q2M218 657 aaPredicted RBP8.81□□□□□ -1
TRAPPC9-212ENST00000521944 ANO6Q4KMQ2 910 aa8.81□□□□□ -1
TRAPPC9-212ENST00000521944 LIPIQ6XZB0 460 aa8.81□□□□□ -1
TRAPPC9-212ENST00000521944 CDH24Q86UP0 819 aa8.81□□□□□ -1
TRAPPC9-212ENST00000521944 CUZD1Q86UP6 607 aa8.81□□□□□ -1
TRAPPC9-212ENST00000521944 FJX1Q86VR8 437 aa8.81□□□□□ -1
TRAPPC9-212ENST00000521944 DRC7Q8IY82 874 aa8.81□□□□□ -1
TRAPPC9-212ENST00000521944 CBARPQ8N350 705 aaPredicted RBP8.81□□□□□ -1
TRAPPC9-212ENST00000521944 GLIS1Q8NBF1 620 aa8.81□□□□□ -1
TRAPPC9-212ENST00000521944 LMO3Q8TAP4 145 aa8.81□□□□□ -1
TRAPPC9-212ENST00000521944 EDARADDQ8WWZ3 215 aa8.81□□□□□ -1
TRAPPC9-212ENST00000521944 NT5C3BQ969T7 300 aa8.81□□□□□ -1
TRAPPC9-212ENST00000521944 PAGE5Q96GU1 130 aa8.81□□□□□ -1
TRAPPC9-212ENST00000521944 AHCYL2Q96HN2 611 aaKnown RBP8.81□□□□□ -1
TRAPPC9-212ENST00000521944 OR6C1Q96RD1 312 aa8.81□□□□□ -1
TRAPPC9-212ENST00000521944 CPXM1Q96SM3 734 aa8.81□□□□□ -1
TRAPPC9-212ENST00000521944 NPY6RQ99463 290 aa8.81□□□□□ -1
TRAPPC9-212ENST00000521944 SLC38A3Q99624 504 aa8.81□□□□□ -1
TRAPPC9-212ENST00000521944 TEX101Q9BY14 249 aa8.81□□□□□ -1
TRAPPC9-212ENST00000521944 KLC2Q9H0B6 622 aa8.81□□□□□ -1
TRAPPC9-212ENST00000521944 WDCPQ9H6R7 721 aa8.81□□□□□ -1
TRAPPC9-212ENST00000521944 WDR26Q9H7D7 661 aa8.81□□□□□ -1
TRAPPC9-212ENST00000521944 OGFRQ9NZT2 677 aa8.81□□□□□ -1
TRAPPC9-212ENST00000521944 DNMT3AQ9Y6K1 912 aaPredicted RBP8.81□□□□□ -1
TRAPPC9-212ENST00000521944 VPS13CQ709C8 3753 aa8.81□□□□□ -1
TRAPPC9-212ENST00000521944 SSU72P8A0A1W2PR75 194 aa8.8□□□□□ -1
TRAPPC9-212ENST00000521944 F5H423 210 aaPredicted RBP8.8□□□□□ -1
TRAPPC9-212ENST00000521944 HSF2BPO75031 334 aa8.8□□□□□ -1
TRAPPC9-212ENST00000521944 FAM155BO75949 473 aa8.8□□□□□ -1
TRAPPC9-212ENST00000521944 TMCC1O94876 653 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms