RNA–Protein interactions for RNA: ENST00000520339.5

CTNNA1-221, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-221ENST00000520339 THSD1Q9NS62 852 aa9.3□□□□□ -0.92
CTNNA1-221ENST00000520339 GULP1Q9UBP9 304 aa9.3□□□□□ -0.92
CTNNA1-221ENST00000520339 SATB2Q9UPW6 733 aa9.3□□□□□ -0.92
CTNNA1-221ENST00000520339 DGKBQ9Y6T7 804 aa9.3□□□□□ -0.92
CTNNA1-221ENST00000520339 DOCK9Q9BZ29 2069 aa9.3□□□□□ -0.92
CTNNA1-221ENST00000520339 IGSF10Q6WRI0 2623 aa9.29□□□□□ -0.92
CTNNA1-221ENST00000520339 TEX51A0A1B0GUA7 166 aa9.29□□□□□ -0.92
CTNNA1-221ENST00000520339 PMS2P1A4D2B8 440 aa9.29□□□□□ -0.92
CTNNA1-221ENST00000520339 TMEM202A6NGA9 273 aa9.29□□□□□ -0.92
CTNNA1-221ENST00000520339 HTRA2O43464 458 aaPredicted RBP9.29□□□□□ -0.92
CTNNA1-221ENST00000520339 C1QL1O75973 258 aa9.29□□□□□ -0.92
CTNNA1-221ENST00000520339 TNFP01375 233 aa9.29□□□□□ -0.92
CTNNA1-221ENST00000520339 PRB1P04280 392 aa9.29□□□□□ -0.92
CTNNA1-221ENST00000520339 MYBL1P10243 752 aa9.29□□□□□ -0.92
CTNNA1-221ENST00000520339 SKILP12757 684 aa9.29□□□□□ -0.92
CTNNA1-221ENST00000520339 CTSEP14091 401 aa9.29□□□□□ -0.92
CTNNA1-221ENST00000520339 CR2P20023 1033 aa9.29□□□□□ -0.92
CTNNA1-221ENST00000520339 RBMS1P29558 406 aaKnown RBP9.29□□□□□ -0.92
CTNNA1-221ENST00000520339 TRIM23P36406 574 aa9.29□□□□□ -0.92
CTNNA1-221ENST00000520339 SCNN1BP51168 640 aa9.29□□□□□ -0.92
CTNNA1-221ENST00000520339 RENBPP51606 427 aa9.29□□□□□ -0.92
CTNNA1-221ENST00000520339 KIAA1024LP59773 190 aa9.29□□□□□ -0.92
CTNNA1-221ENST00000520339 AP1S1P61966 158 aa9.29□□□□□ -0.92
CTNNA1-221ENST00000520339 SLC10A7Q0GE19 358 aa9.29□□□□□ -0.92
CTNNA1-221ENST00000520339 IQCB1Q15051 598 aa9.29□□□□□ -0.92
CTNNA1-221ENST00000520339 TCEA2Q15560 299 aa9.29□□□□□ -0.92
CTNNA1-221ENST00000520339 DPYSL2Q16555 572 aa9.29□□□□□ -0.92
CTNNA1-221ENST00000520339 BOLA3Q53S33 107 aa9.29□□□□□ -0.92
CTNNA1-221ENST00000520339 C3orf38Q5JPI3 329 aa9.29□□□□□ -0.92
CTNNA1-221ENST00000520339 OGFOD3Q6PK18 319 aa9.29□□□□□ -0.92
CTNNA1-221ENST00000520339 PCSK4Q6UW60 755 aa9.29□□□□□ -0.92
CTNNA1-221ENST00000520339 RD3Q7Z3Z2 195 aa9.29□□□□□ -0.92
CTNNA1-221ENST00000520339 POLNQ7Z5Q5 900 aa9.29□□□□□ -0.92
CTNNA1-221ENST00000520339 GKN2Q86XP6 184 aa9.29□□□□□ -0.92
CTNNA1-221ENST00000520339 PELI3Q8N2H9 469 aa9.29□□□□□ -0.92
CTNNA1-221ENST00000520339 CBARPQ8N350 705 aaPredicted RBP9.29□□□□□ -0.92
CTNNA1-221ENST00000520339 GPR156Q8NFN8 814 aa9.29□□□□□ -0.92
CTNNA1-221ENST00000520339 ATL2Q8NHH9 583 aa9.29□□□□□ -0.92
CTNNA1-221ENST00000520339 KCNE4Q8WWG9 221 aa9.29□□□□□ -0.92
CTNNA1-221ENST00000520339 GATAD2BQ8WXI9 593 aa9.29□□□□□ -0.92
CTNNA1-221ENST00000520339 OR1E3Q8WZA6 343 aa9.29□□□□□ -0.92
CTNNA1-221ENST00000520339 FUBP1Q96AE4 644 aaKnown RBP9.29□□□□□ -0.92
CTNNA1-221ENST00000520339 ZNF653Q96CK0 615 aa9.29□□□□□ -0.92
CTNNA1-221ENST00000520339 PDXPQ96GD0 296 aa9.29□□□□□ -0.92
CTNNA1-221ENST00000520339 WDR92Q96MX6 357 aa9.29□□□□□ -0.92
CTNNA1-221ENST00000520339 ZNF599Q96NL3 588 aa9.29□□□□□ -0.92
CTNNA1-221ENST00000520339 RBM15Q96T37 977 aaKnown RBP eCLIP9.29□□□□□ -0.92
CTNNA1-221ENST00000520339 DPH1Q9BZG8 443 aa9.29□□□□□ -0.92
CTNNA1-221ENST00000520339 SOX17Q9H6I2 414 aaPredicted RBP9.29□□□□□ -0.92
CTNNA1-221ENST00000520339 FGF22Q9HCT0 170 aa9.29□□□□□ -0.92
CTNNA1-221ENST00000520339 ETNK2Q9NVF9 386 aa9.29□□□□□ -0.92
CTNNA1-221ENST00000520339 SIRPGQ9P1W8 387 aa9.29□□□□□ -0.92
CTNNA1-221ENST00000520339 KLQ9UEF7 1012 aa9.29□□□□□ -0.92
CTNNA1-221ENST00000520339 GPR34Q9UPC5 381 aa9.29□□□□□ -0.92
CTNNA1-221ENST00000520339 SCINQ9Y6U3 715 aa9.29□□□□□ -0.92
CTNNA1-221ENST00000520339 ITPR1Q14643 2758 aa9.29□□□□□ -0.92
CTNNA1-221ENST00000520339 A0A1W2PQM1 296 aa9.28□□□□□ -0.92
CTNNA1-221ENST00000520339 CDRT15L2A8MXV6 281 aa9.28□□□□□ -0.92
CTNNA1-221ENST00000520339 SHISA8B8ZZ34 492 aa9.28□□□□□ -0.92
CTNNA1-221ENST00000520339 CACNB4O00305 520 aaPredicted RBP9.28□□□□□ -0.92
CTNNA1-221ENST00000520339 TNFRSF10CO14798 259 aa9.28□□□□□ -0.92
CTNNA1-221ENST00000520339 KLK10O43240 276 aa9.28□□□□□ -0.92
CTNNA1-221ENST00000520339 MAFKO60675 156 aa9.28□□□□□ -0.92
CTNNA1-221ENST00000520339 TCF4P15884 667 aa9.28□□□□□ -0.92
CTNNA1-221ENST00000520339 HSPA9P38646 679 aaKnown RBP9.28□□□□□ -0.92
CTNNA1-221ENST00000520339 ZNF165P49910 485 aa9.28□□□□□ -0.92
CTNNA1-221ENST00000520339 POLR2LP62875 67 aaKnown RBP9.28□□□□□ -0.92
CTNNA1-221ENST00000520339 CXADRP78310 365 aa9.28□□□□□ -0.92
CTNNA1-221ENST00000520339 CCL7P80098 99 aa9.28□□□□□ -0.92
CTNNA1-221ENST00000520339 SPIDRQ14159 915 aa9.28□□□□□ -0.92
CTNNA1-221ENST00000520339 FIGNQ5HY92 759 aa9.28□□□□□ -0.92
CTNNA1-221ENST00000520339 TXNRD3NBQ6F5E7 133 aa9.28□□□□□ -0.92
CTNNA1-221ENST00000520339 PNCKQ6P2M8 343 aa9.28□□□□□ -0.92
CTNNA1-221ENST00000520339 B3GNT8Q7Z7M8 397 aa9.28□□□□□ -0.92
CTNNA1-221ENST00000520339 CLEC14AQ86T13 490 aa9.28□□□□□ -0.92
CTNNA1-221ENST00000520339 PGBD5Q8N414 524 aa9.28□□□□□ -0.92
CTNNA1-221ENST00000520339 RNF214Q8ND24 703 aa9.28□□□□□ -0.92
CTNNA1-221ENST00000520339 OR56A4Q8NGH8 313 aa9.28□□□□□ -0.92
CTNNA1-221ENST00000520339 WDR36Q8NI36 951 aaKnown RBP9.28□□□□□ -0.92
CTNNA1-221ENST00000520339 SNRNP27Q8WVK2 155 aaKnown RBP9.28□□□□□ -0.92
CTNNA1-221ENST00000520339 ANP32BQ92688 251 aaKnown RBP9.28□□□□□ -0.92
CTNNA1-221ENST00000520339 TRIM11Q96F44 468 aa9.28□□□□□ -0.92
CTNNA1-221ENST00000520339 COQ10AQ96MF6 247 aa9.28□□□□□ -0.92
CTNNA1-221ENST00000520339 CSPG4P5Q96PW8 444 aa9.28□□□□□ -0.92
CTNNA1-221ENST00000520339 NUDCD1Q96RS6 583 aa9.28□□□□□ -0.92
CTNNA1-221ENST00000520339 LGR4Q9BXB1 951 aa9.28□□□□□ -0.92
CTNNA1-221ENST00000520339 ZWILCHQ9H900 591 aa9.28□□□□□ -0.92
CTNNA1-221ENST00000520339 NOD2Q9HC29 1040 aa9.28□□□□□ -0.92
CTNNA1-221ENST00000520339 MRPL47Q9HD33 250 aaKnown RBP9.28□□□□□ -0.92
CTNNA1-221ENST00000520339 MYO1AQ9UBC5 1043 aa9.28□□□□□ -0.92
CTNNA1-221ENST00000520339 B4GALT6Q9UBX8 382 aa9.28□□□□□ -0.92
CTNNA1-221ENST00000520339 DOCK4Q8N1I0 1966 aa9.28□□□□□ -0.92
CTNNA1-221ENST00000520339 CCDC187A0A096LP49 1063 aa9.27□□□□□ -0.93
CTNNA1-221ENST00000520339 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.27□□□□□ -0.93
CTNNA1-221ENST00000520339 A0A1W2PQ67 120 aa9.27□□□□□ -0.93
CTNNA1-221ENST00000520339 FAM221AA4D161 298 aa9.27□□□□□ -0.93
CTNNA1-221ENST00000520339 A8MX80 341 aa9.27□□□□□ -0.93
CTNNA1-221ENST00000520339 TMX2-CTNND1H3BSU7 103 aa9.27□□□□□ -0.93
CTNNA1-221ENST00000520339 NOBOXO60393 691 aa9.27□□□□□ -0.93
CTNNA1-221ENST00000520339 SOCS5O75159 536 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms