RNA–Protein interactions for RNA: ENST00000517713.5

COL13A1-210, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-210ENST00000517713 FUT11Q495W5 492 aa26.43■■□□□ 1.82
COL13A1-210ENST00000517713 DNAL1Q4LDG9 190 aa26.43■■□□□ 1.82
COL13A1-210ENST00000517713 ZNF678Q5SXM1 525 aa26.43■■□□□ 1.82
COL13A1-210ENST00000517713 RPS27LQ71UM5 84 aaKnown RBP26.43■■□□□ 1.82
COL13A1-210ENST00000517713 CMTM5Q96DZ9 223 aa26.43■■□□□ 1.82
COL13A1-210ENST00000517713 CCDC28BQ9BUN5 200 aa26.43■■□□□ 1.82
COL13A1-210ENST00000517713 DERL2Q9GZP9 239 aa26.43■■□□□ 1.82
COL13A1-210ENST00000517713 VPS26AO75436 327 aa26.42■■□□□ 1.82
COL13A1-210ENST00000517713 JUNP05412 331 aaKnown RBP26.42■■□□□ 1.82
COL13A1-210ENST00000517713 PTGER3P43115 390 aa26.42■■□□□ 1.82
COL13A1-210ENST00000517713 SNRPD1P62314 119 aaKnown RBP26.42■■□□□ 1.82
COL13A1-210ENST00000517713 SPRED2Q7Z698 418 aa26.42■■□□□ 1.82
COL13A1-210ENST00000517713 C7orf61Q8IZ16 206 aa26.42■■□□□ 1.82
COL13A1-210ENST00000517713 POU5F2Q8N7G0 328 aa26.42■■□□□ 1.82
COL13A1-210ENST00000517713 EXT2Q93063 718 aa26.42■■□□□ 1.82
COL13A1-210ENST00000517713 GSTO2Q9H4Y5 243 aa26.42■■□□□ 1.82
COL13A1-210ENST00000517713 ZFYVE1Q9HBF4 777 aa26.42■■□□□ 1.82
COL13A1-210ENST00000517713 TRPC5OSA6NMA1 111 aa26.41■■□□□ 1.82
COL13A1-210ENST00000517713 NEDD8-MDP1E9PL57 170 aa26.41■■□□□ 1.82
COL13A1-210ENST00000517713 GRM6O15303 877 aa26.41■■□□□ 1.82
COL13A1-210ENST00000517713 SERPINA4P29622 427 aa26.41■■□□□ 1.82
COL13A1-210ENST00000517713 SULT2A1Q06520 285 aa26.41■■□□□ 1.82
COL13A1-210ENST00000517713 CTSL3PQ5NE16 218 aa26.41■■□□□ 1.82
COL13A1-210ENST00000517713 LEMD2Q8NC56 503 aa26.41■■□□□ 1.82
COL13A1-210ENST00000517713 FAR2Q96K12 515 aa26.41■■□□□ 1.82
COL13A1-210ENST00000517713 TRMOQ9BU70 441 aa26.41■■□□□ 1.82
COL13A1-210ENST00000517713 PLA2G4CQ9UP65 541 aa26.41■■□□□ 1.82
COL13A1-210ENST00000517713 HS3ST2Q9Y278 367 aa26.41■■□□□ 1.82
COL13A1-210ENST00000517713 GBF1Q92538 1859 aa26.41■■□□□ 1.82
COL13A1-210ENST00000517713 C1orf232A0A0U1RR37 186 aa26.41■■□□□ 1.82
COL13A1-210ENST00000517713 MAGEC1O60732 1142 aa26.41■■□□□ 1.82
COL13A1-210ENST00000517713 XYLBO75191 536 aa26.41■■□□□ 1.82
COL13A1-210ENST00000517713 BMP1P13497 986 aa26.41■■□□□ 1.82
COL13A1-210ENST00000517713 CD9P21926 228 aa26.41■■□□□ 1.82
COL13A1-210ENST00000517713 HNF1BP35680 557 aa26.41■■□□□ 1.82
COL13A1-210ENST00000517713 COPAP53621 1224 aa26.41■■□□□ 1.82
COL13A1-210ENST00000517713 HERVK_113P63132 956 aa26.41■■□□□ 1.82
COL13A1-210ENST00000517713 NTHL1P78549 312 aa26.41■■□□□ 1.82
COL13A1-210ENST00000517713 KLF10Q13118 480 aa26.41■■□□□ 1.82
COL13A1-210ENST00000517713 CAMK1Q14012 370 aa26.41■■□□□ 1.82
COL13A1-210ENST00000517713 NAA25Q14CX7 972 aa26.41■■□□□ 1.82
COL13A1-210ENST00000517713 ASTLQ6HA08 431 aaPredicted RBP26.41■■□□□ 1.82
COL13A1-210ENST00000517713 CUZD1Q86UP6 607 aa26.41■■□□□ 1.82
COL13A1-210ENST00000517713 AFAP1L2Q8N4X5 818 aa26.41■■□□□ 1.82
COL13A1-210ENST00000517713 KIAA1191Q96A73 305 aa26.41■■□□□ 1.82
COL13A1-210ENST00000517713 ISG20Q96AZ6 181 aaKnown RBP26.41■■□□□ 1.82
COL13A1-210ENST00000517713 ATOH8Q96SQ7 321 aa26.41■■□□□ 1.82
COL13A1-210ENST00000517713 BBS2Q9BXC9 721 aa26.41■■□□□ 1.82
COL13A1-210ENST00000517713 ERVK-6Q9BXR3 956 aa26.41■■□□□ 1.82
COL13A1-210ENST00000517713 GALPQ9UBC7 116 aa26.41■■□□□ 1.82
COL13A1-210ENST00000517713 COMMD10Q9Y6G5 202 aa26.41■■□□□ 1.82
COL13A1-210ENST00000517713 SOBPA7XYQ1 873 aa26.4■■□□□ 1.82
COL13A1-210ENST00000517713 C5orf67F2Z3F1 127 aa26.4■■□□□ 1.82
COL13A1-210ENST00000517713 CLASP2O75122 1294 aaKnown RBP26.4■■□□□ 1.82
COL13A1-210ENST00000517713 SUPT7LO94864 414 aa26.4■■□□□ 1.82
COL13A1-210ENST00000517713 HNRNPA1P09651 372 aaKnown RBP eCLIP26.4■■□□□ 1.82
COL13A1-210ENST00000517713 PRDX6P30041 224 aa26.4■■□□□ 1.82
COL13A1-210ENST00000517713 ADARP55265 1226 aaKnown RBP26.4■■□□□ 1.82
COL13A1-210ENST00000517713 ATP6V0D1P61421 351 aa26.4■■□□□ 1.82
COL13A1-210ENST00000517713 STK40Q8N2I9 435 aa26.4■■□□□ 1.82
COL13A1-210ENST00000517713 NKAPQ8N5F7 415 aaKnown RBP26.4■■□□□ 1.82
COL13A1-210ENST00000517713 STAG3L4Q8TBR4 150 aa26.4■■□□□ 1.82
COL13A1-210ENST00000517713 IRF7Q92985 503 aa26.4■■□□□ 1.82
COL13A1-210ENST00000517713 TBRG4Q969Z0 631 aaKnown RBP eCLIP26.4■■□□□ 1.82
COL13A1-210ENST00000517713 LAMA2P24043 3122 aaKnown RBP26.4■■□□□ 1.82
COL13A1-210ENST00000517713 UBXN8O00124 270 aa26.39■■□□□ 1.82
COL13A1-210ENST00000517713 NIPSNAP2O75323 286 aa26.39■■□□□ 1.82
COL13A1-210ENST00000517713 SYN1P17600 705 aa26.39■■□□□ 1.82
COL13A1-210ENST00000517713 GM2AP17900 193 aa26.39■■□□□ 1.82
COL13A1-210ENST00000517713 MYLK3Q32MK0 819 aa26.39■■□□□ 1.82
COL13A1-210ENST00000517713 UNC50Q53HI1 259 aa26.39■■□□□ 1.82
COL13A1-210ENST00000517713 NXNQ6DKJ4 435 aa26.39■■□□□ 1.82
COL13A1-210ENST00000517713 C22orf39Q6P5X5 142 aa26.39■■□□□ 1.82
COL13A1-210ENST00000517713 RAB44Q7Z6P3 723 aaPredicted RBP26.39■■□□□ 1.82
COL13A1-210ENST00000517713 PTGR2Q8N8N7 351 aaPredicted RBP26.39■■□□□ 1.82
COL13A1-210ENST00000517713 C19orf43Q9BQ61 176 aa26.39■■□□□ 1.82
COL13A1-210ENST00000517713 TRMT6Q9UJA5 497 aaKnown RBP26.39■■□□□ 1.82
COL13A1-210ENST00000517713 SLC25A13Q9UJS0 675 aa26.39■■□□□ 1.82
COL13A1-210ENST00000517713 GPR39O43194 453 aa26.39■■□□□ 1.81
COL13A1-210ENST00000517713 KERAO60938 352 aa26.39■■□□□ 1.81
COL13A1-210ENST00000517713 ESR1P03372 595 aa26.39■■□□□ 1.81
COL13A1-210ENST00000517713 MTHFD2P13995 350 aa26.39■■□□□ 1.81
COL13A1-210ENST00000517713 CPOXP36551 454 aa26.39■■□□□ 1.81
COL13A1-210ENST00000517713 CDKN3Q16667 212 aa26.39■■□□□ 1.81
COL13A1-210ENST00000517713 PRSS36Q5K4E3 855 aa26.39■■□□□ 1.81
COL13A1-210ENST00000517713 SLC30A3Q99726 388 aa26.39■■□□□ 1.81
COL13A1-210ENST00000517713 LINC00597Q9H2U6 94 aa26.39■■□□□ 1.81
COL13A1-210ENST00000517713 SPHK2Q9NRA0 654 aa26.39■■□□□ 1.81
COL13A1-210ENST00000517713 TBC1D14Q9P2M4 693 aa26.39■■□□□ 1.81
COL13A1-210ENST00000517713 CAPN8A6NHC0 703 aa26.38■■□□□ 1.81
COL13A1-210ENST00000517713 MEI4A8MW99 385 aa26.38■■□□□ 1.81
COL13A1-210ENST00000517713 CLDN7O95471 211 aa26.38■■□□□ 1.81
COL13A1-210ENST00000517713 ZNF77Q15935 545 aa26.38■■□□□ 1.81
COL13A1-210ENST00000517713 FAM151BQ6UXP7 276 aa26.38■■□□□ 1.81
COL13A1-210ENST00000517713 CERS6Q6ZMG9 384 aa26.38■■□□□ 1.81
COL13A1-210ENST00000517713 ZSWIM9Q86XI8 627 aa26.38■■□□□ 1.81
COL13A1-210ENST00000517713 SIDT2Q8NBJ9 832 aaKnown RBP26.38■■□□□ 1.81
COL13A1-210ENST00000517713 KCNJ9Q92806 393 aa26.38■■□□□ 1.81
COL13A1-210ENST00000517713 MAELQ96JY0 434 aaKnown RBP26.38■■□□□ 1.81
COL13A1-210ENST00000517713 P2RY12Q9H244 342 aa26.38■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms