RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 SMSP52788 366 aa3.96□□□□□ -1.78
RNU4-60P-201ENST00000517239 VCPP55072 806 aaKnown RBP3.96□□□□□ -1.78
RNU4-60P-201ENST00000517239 MTTPP55157 894 aa3.96□□□□□ -1.78
RNU4-60P-201ENST00000517239 PTENP60484 403 aa3.96□□□□□ -1.78
RNU4-60P-201ENST00000517239 SHC2P98077 582 aa3.96□□□□□ -1.78
RNU4-60P-201ENST00000517239 MC2RQ01718 297 aa3.96□□□□□ -1.78
RNU4-60P-201ENST00000517239 SPP2Q13103 211 aa3.96□□□□□ -1.78
RNU4-60P-201ENST00000517239 KLF10Q13118 480 aa3.96□□□□□ -1.78
RNU4-60P-201ENST00000517239 DDX39BQ13838 428 aaKnown RBP3.96□□□□□ -1.78
RNU4-60P-201ENST00000517239 GIT2Q14161 759 aa3.96□□□□□ -1.78
RNU4-60P-201ENST00000517239 ADGRE1Q14246 886 aa3.96□□□□□ -1.78
RNU4-60P-201ENST00000517239 KRT33BQ14525 404 aa3.96□□□□□ -1.78
RNU4-60P-201ENST00000517239 PTPRCAPQ14761 206 aa3.96□□□□□ -1.78
RNU4-60P-201ENST00000517239 TBR1Q16650 682 aa3.96□□□□□ -1.78
RNU4-60P-201ENST00000517239 CCDC142Q17RM4 750 aa3.96□□□□□ -1.78
RNU4-60P-201ENST00000517239 VWC2Q2TAL6 325 aa3.96□□□□□ -1.78
RNU4-60P-201ENST00000517239 IQCCQ4KMZ1 466 aa3.96□□□□□ -1.78
RNU4-60P-201ENST00000517239 FILIP1LQ4L180 1135 aa3.96□□□□□ -1.78
RNU4-60P-201ENST00000517239 ZNF789Q5FWF6 425 aa3.96□□□□□ -1.78
RNU4-60P-201ENST00000517239 SPOUT1Q5T280 376 aaKnown RBP3.96□□□□□ -1.78
RNU4-60P-201ENST00000517239 RNF43Q68DV7 783 aa3.96□□□□□ -1.78
RNU4-60P-201ENST00000517239 DHRS7BQ6IAN0 325 aaPredicted RBP3.96□□□□□ -1.78
RNU4-60P-201ENST00000517239 TEX38Q6PEX7 206 aa3.96□□□□□ -1.78
RNU4-60P-201ENST00000517239 BRAT1Q6PJG6 821 aa3.96□□□□□ -1.78
RNU4-60P-201ENST00000517239 LRIG3Q6UXM1 1119 aa3.96□□□□□ -1.78
RNU4-60P-201ENST00000517239 SEPT14Q6ZU15 432 aa3.96□□□□□ -1.78
RNU4-60P-201ENST00000517239 LDB1Q86U70 411 aaPredicted RBP3.96□□□□□ -1.78
RNU4-60P-201ENST00000517239 ADIPOR2Q86V24 386 aa3.96□□□□□ -1.78
RNU4-60P-201ENST00000517239 TMEM151BQ8IW70 566 aa3.96□□□□□ -1.78
RNU4-60P-201ENST00000517239 PM20D2Q8IYS1 436 aa3.96□□□□□ -1.78
RNU4-60P-201ENST00000517239 CLEC1AQ8NC01 280 aa3.96□□□□□ -1.78
RNU4-60P-201ENST00000517239 SLC24A4Q8NFF2 622 aa3.96□□□□□ -1.78
RNU4-60P-201ENST00000517239 OR52L2PQ8NGH6 319 aa3.96□□□□□ -1.78
RNU4-60P-201ENST00000517239 OR2T34Q8NGX1 318 aa3.96□□□□□ -1.78
RNU4-60P-201ENST00000517239 OR8K5Q8NH50 307 aa3.96□□□□□ -1.78
RNU4-60P-201ENST00000517239 FAM110DQ8TAY7 271 aaPredicted RBP3.96□□□□□ -1.78
RNU4-60P-201ENST00000517239 CAGE1Q8TC20 777 aa3.96□□□□□ -1.78
RNU4-60P-201ENST00000517239 GANCQ8TET4 914 aa3.96□□□□□ -1.78
RNU4-60P-201ENST00000517239 GLMPQ8WWB7 406 aa3.96□□□□□ -1.78
RNU4-60P-201ENST00000517239 ATG4AQ8WYN0 398 aa3.96□□□□□ -1.78
RNU4-60P-201ENST00000517239 RAPGEF5Q92565 580 aa3.96□□□□□ -1.78
RNU4-60P-201ENST00000517239 NSMAFQ92636 917 aa3.96□□□□□ -1.78
RNU4-60P-201ENST00000517239 FYTTD1Q96QD9 318 aaKnown RBP3.96□□□□□ -1.78
RNU4-60P-201ENST00000517239 NACC1Q96RE7 527 aa3.96□□□□□ -1.78
RNU4-60P-201ENST00000517239 DCLRE1CQ96SD1 692 aaKnown RBP3.96□□□□□ -1.78
RNU4-60P-201ENST00000517239 PNKPQ96T60 521 aa3.96□□□□□ -1.78
RNU4-60P-201ENST00000517239 CADM1Q9BY67 442 aaKnown RBP3.96□□□□□ -1.78
RNU4-60P-201ENST00000517239 RAB33BQ9H082 229 aa3.96□□□□□ -1.78
RNU4-60P-201ENST00000517239 SPATC1LQ9H0A9 340 aa3.96□□□□□ -1.78
RNU4-60P-201ENST00000517239 OR10A2Q9H208 303 aa3.96□□□□□ -1.78
RNU4-60P-201ENST00000517239 CARD9Q9H257 536 aa3.96□□□□□ -1.78
RNU4-60P-201ENST00000517239 SLCO5A1Q9H2Y9 848 aa3.96□□□□□ -1.78
RNU4-60P-201ENST00000517239 TFB2MQ9H5Q4 396 aaKnown RBP3.96□□□□□ -1.78
RNU4-60P-201ENST00000517239 CDCP1Q9H5V8 836 aa3.96□□□□□ -1.78
RNU4-60P-201ENST00000517239 RPRD1BQ9NQG5 326 aaKnown RBP3.96□□□□□ -1.78
RNU4-60P-201ENST00000517239 TCP11L1Q9NUJ3 509 aa3.96□□□□□ -1.78
RNU4-60P-201ENST00000517239 CTTNBP2NLQ9P2B4 639 aa3.96□□□□□ -1.78
RNU4-60P-201ENST00000517239 KLHL14Q9P2G3 628 aa3.96□□□□□ -1.78
RNU4-60P-201ENST00000517239 ANKFY1Q9P2R3 1169 aa3.96□□□□□ -1.78
RNU4-60P-201ENST00000517239 UPB1Q9UBR1 384 aa3.96□□□□□ -1.78
RNU4-60P-201ENST00000517239 KCNN3Q9UGI6 736 aa3.96□□□□□ -1.78
RNU4-60P-201ENST00000517239 IL17BQ9UHF5 180 aa3.96□□□□□ -1.78
RNU4-60P-201ENST00000517239 MBD1Q9UIS9 605 aaPredicted RBP3.96□□□□□ -1.78
RNU4-60P-201ENST00000517239 SLC5A6Q9Y289 635 aa3.96□□□□□ -1.78
RNU4-60P-201ENST00000517239 PLEKHA6Q9Y2H5 1048 aa3.96□□□□□ -1.78
RNU4-60P-201ENST00000517239 WBP11Q9Y2W2 641 aaKnown RBP3.96□□□□□ -1.78
RNU4-60P-201ENST00000517239 N6AMT1Q9Y5N5 214 aa3.96□□□□□ -1.78
RNU4-60P-201ENST00000517239 TMEM94Q12767 1356 aa3.96□□□□□ -1.78
RNU4-60P-201ENST00000517239 UTYO14607 1347 aa3.95□□□□□ -1.78
RNU4-60P-201ENST00000517239 CNTNAP5Q8WYK1 1306 aa3.95□□□□□ -1.78
RNU4-60P-201ENST00000517239 AATKQ6ZMQ8 1374 aa3.95□□□□□ -1.78
RNU4-60P-201ENST00000517239 A0A087WZY1 265 aa3.95□□□□□ -1.78
RNU4-60P-201ENST00000517239 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.95□□□□□ -1.78
RNU4-60P-201ENST00000517239 UBE2QL1A1L167 161 aa3.95□□□□□ -1.78
RNU4-60P-201ENST00000517239 C1orf226A1L170 272 aa3.95□□□□□ -1.78
RNU4-60P-201ENST00000517239 TARSL2A2RTX5 802 aaKnown RBP3.95□□□□□ -1.78
RNU4-60P-201ENST00000517239 FAM47DPA6NHR8 397 aa3.95□□□□□ -1.78
RNU4-60P-201ENST00000517239 NCF1BA6NI72 391 aaPredicted RBP3.95□□□□□ -1.78
RNU4-60P-201ENST00000517239 NCF1CA8MVU1 366 aaPredicted RBP3.95□□□□□ -1.78
RNU4-60P-201ENST00000517239 PRR5-ARHGAP8B1AHC4 643 aa3.95□□□□□ -1.78
RNU4-60P-201ENST00000517239 E9PBE3 544 aa3.95□□□□□ -1.78
RNU4-60P-201ENST00000517239 F8WDY8 70 aa3.95□□□□□ -1.78
RNU4-60P-201ENST00000517239 H0YIN7 160 aa3.95□□□□□ -1.78
RNU4-60P-201ENST00000517239 CXCL11O14625 94 aa3.95□□□□□ -1.78
RNU4-60P-201ENST00000517239 TEX28O15482 410 aa3.95□□□□□ -1.78
RNU4-60P-201ENST00000517239 BUB1O43683 1085 aa3.95□□□□□ -1.78
RNU4-60P-201ENST00000517239 SSX5O60225 188 aa3.95□□□□□ -1.78
RNU4-60P-201ENST00000517239 IDH1O75874 414 aaKnown RBP3.95□□□□□ -1.78
RNU4-60P-201ENST00000517239 C8AP07357 584 aa3.95□□□□□ -1.78
RNU4-60P-201ENST00000517239 ALDOCP09972 364 aaKnown RBP3.95□□□□□ -1.78
RNU4-60P-201ENST00000517239 SPATA31C1P0DKV0 1188 aa3.95□□□□□ -1.78
RNU4-60P-201ENST00000517239 SLURP2P0DP57 97 aa3.95□□□□□ -1.78
RNU4-60P-201ENST00000517239 THRBP10828 461 aa3.95□□□□□ -1.78
RNU4-60P-201ENST00000517239 CSF2RAP15509 400 aa3.95□□□□□ -1.78
RNU4-60P-201ENST00000517239 TCF4P15884 667 aa3.95□□□□□ -1.78
RNU4-60P-201ENST00000517239 CREB1P16220 341 aa3.95□□□□□ -1.78
RNU4-60P-201ENST00000517239 CYP2A7P20853 494 aa3.95□□□□□ -1.78
RNU4-60P-201ENST00000517239 CDH3P22223 829 aa3.95□□□□□ -1.78
RNU4-60P-201ENST00000517239 ACP1P24666 158 aa3.95□□□□□ -1.78
RNU4-60P-201ENST00000517239 CCND3P30281 292 aaPredicted RBP3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms