RNA–Protein interactions for RNA: ENST00000517238.1

SNORA40.16-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 121 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.16-201ENST00000517238 OR4N5Q8IXE1 308 aa-1.22□□□□□ -2.6
SNORA40.16-201ENST00000517238 NXPE1Q8N323 547 aa-1.22□□□□□ -2.6
SNORA40.16-201ENST00000517238 ZNF596Q8TC21 504 aa-1.22□□□□□ -2.6
SNORA40.16-201ENST00000517238 MARCH1Q8TCQ1 289 aa-1.22□□□□□ -2.6
SNORA40.16-201ENST00000517238 PCNPQ8WW12 178 aaKnown RBP-1.22□□□□□ -2.6
SNORA40.16-201ENST00000517238 NRG4Q8WWG1 115 aa-1.22□□□□□ -2.6
SNORA40.16-201ENST00000517238 TMEM143Q96AN5 459 aa-1.22□□□□□ -2.6
SNORA40.16-201ENST00000517238 RUNDC3BQ96NL0 473 aa-1.22□□□□□ -2.6
SNORA40.16-201ENST00000517238 CD180Q99467 661 aa-1.22□□□□□ -2.6
SNORA40.16-201ENST00000517238 FUCA2Q9BTY2 467 aa-1.22□□□□□ -2.6
SNORA40.16-201ENST00000517238 MSTO1Q9BUK6 570 aa-1.22□□□□□ -2.6
SNORA40.16-201ENST00000517238 ULBP2Q9BZM5 246 aa-1.22□□□□□ -2.6
SNORA40.16-201ENST00000517238 TRIM5Q9C035 493 aa-1.22□□□□□ -2.6
SNORA40.16-201ENST00000517238 HIPK3Q9H422 1215 aa-1.22□□□□□ -2.6
SNORA40.16-201ENST00000517238 CERS4Q9HA82 394 aa-1.22□□□□□ -2.6
SNORA40.16-201ENST00000517238 VEZTQ9HBM0 779 aa-1.22□□□□□ -2.6
SNORA40.16-201ENST00000517238 TRIM39Q9HCM9 518 aa-1.22□□□□□ -2.6
SNORA40.16-201ENST00000517238 LHX9Q9NQ69 397 aa-1.22□□□□□ -2.6
SNORA40.16-201ENST00000517238 NDE1Q9NXR1 346 aa-1.22□□□□□ -2.6
SNORA40.16-201ENST00000517238 CLEC5AQ9NY25 188 aa-1.22□□□□□ -2.6
SNORA40.16-201ENST00000517238 ACSL5Q9ULC5 683 aa-1.22□□□□□ -2.6
SNORA40.16-201ENST00000517238 GRID1Q9ULK0 1009 aa-1.22□□□□□ -2.6
SNORA40.16-201ENST00000517238 PPP1R3CQ9UQK1 317 aa-1.22□□□□□ -2.6
SNORA40.16-201ENST00000517238 TMX2Q9Y320 296 aa-1.22□□□□□ -2.6
SNORA40.16-201ENST00000517238 RIPK3Q9Y572 518 aa-1.22□□□□□ -2.6
SNORA40.16-201ENST00000517238 FLT1P17948 1338 aa-1.22□□□□□ -2.61
SNORA40.16-201ENST00000517238 TAF1P21675 1872 aa-1.22□□□□□ -2.61
SNORA40.16-201ENST00000517238 A0A1B0GW55 424 aa-1.23□□□□□ -2.61
SNORA40.16-201ENST00000517238 C17orf102A2RUQ5 167 aa-1.23□□□□□ -2.61
SNORA40.16-201ENST00000517238 CTAGE9A4FU28 777 aa-1.23□□□□□ -2.61
SNORA40.16-201ENST00000517238 CBY3A6NI87 242 aa-1.23□□□□□ -2.61
SNORA40.16-201ENST00000517238 ZNF891A8MT65 544 aaPredicted RBP-1.23□□□□□ -2.61
SNORA40.16-201ENST00000517238 AKR1B15C9JRZ8 316 aaPredicted RBP-1.23□□□□□ -2.61
SNORA40.16-201ENST00000517238 K7ENM7 598 aa-1.23□□□□□ -2.61
SNORA40.16-201ENST00000517238 ZNF197O14709 1029 aa-1.23□□□□□ -2.61
SNORA40.16-201ENST00000517238 ZIC3O60481 467 aa-1.23□□□□□ -2.61
SNORA40.16-201ENST00000517238 PRAMEF12O95522 483 aa-1.23□□□□□ -2.61
SNORA40.16-201ENST00000517238 RETP07949 1114 aa-1.23□□□□□ -2.61
SNORA40.16-201ENST00000517238 JMJD7P0C870 316 aa-1.23□□□□□ -2.61
SNORA40.16-201ENST00000517238 FAM200BP0CF97 657 aa-1.23□□□□□ -2.61
SNORA40.16-201ENST00000517238 CTAGE8P0CG41 777 aa-1.23□□□□□ -2.61
SNORA40.16-201ENST00000517238 DUX4L2P0CJ85 424 aa-1.23□□□□□ -2.61
SNORA40.16-201ENST00000517238 DUX4L3P0CJ86 424 aa-1.23□□□□□ -2.61
SNORA40.16-201ENST00000517238 DUX4L5P0CJ88 424 aa-1.23□□□□□ -2.61
SNORA40.16-201ENST00000517238 DUX4L6P0CJ89 424 aa-1.23□□□□□ -2.61
SNORA40.16-201ENST00000517238 DUX4L7P0CJ90 424 aa-1.23□□□□□ -2.61
SNORA40.16-201ENST00000517238 SLC5A3P53794 718 aa-1.23□□□□□ -2.61
SNORA40.16-201ENST00000517238 UCP3P55916 312 aa-1.23□□□□□ -2.61
SNORA40.16-201ENST00000517238 DCDC1P59894 354 aa-1.23□□□□□ -2.61
SNORA40.16-201ENST00000517238 CYCSP99999 105 aaKnown RBP-1.23□□□□□ -2.61
SNORA40.16-201ENST00000517238 EXOSC9Q06265 439 aaKnown RBP-1.23□□□□□ -2.61
SNORA40.16-201ENST00000517238 ZNF460Q14592 562 aa-1.23□□□□□ -2.61
SNORA40.16-201ENST00000517238 RBMY1FQ15415 496 aaKnown RBP-1.23□□□□□ -2.61
SNORA40.16-201ENST00000517238 KHDC1Q4VXA5 237 aaKnown RBP-1.23□□□□□ -2.61
SNORA40.16-201ENST00000517238 CT47A1Q5JQC4 288 aaPredicted RBP-1.23□□□□□ -2.61
SNORA40.16-201ENST00000517238 OR7E24Q6IFN5 339 aa-1.23□□□□□ -2.61
SNORA40.16-201ENST00000517238 DUX4L9Q6RFH8 374 aaPredicted RBP-1.23□□□□□ -2.61
SNORA40.16-201ENST00000517238 FASTKD5Q7L8L6 764 aaKnown RBP-1.23□□□□□ -2.61
SNORA40.16-201ENST00000517238 ISCA2Q86U28 154 aa-1.23□□□□□ -2.61
SNORA40.16-201ENST00000517238 TMEM25Q86YD3 366 aa-1.23□□□□□ -2.61
SNORA40.16-201ENST00000517238 FAM90A1Q86YD7 464 aa-1.23□□□□□ -2.61
SNORA40.16-201ENST00000517238 KLBQ86Z14 1044 aa-1.23□□□□□ -2.61
SNORA40.16-201ENST00000517238 CTAGE4Q8IX94 777 aa-1.23□□□□□ -2.61
SNORA40.16-201ENST00000517238 ZDHHC23Q8IYP9 409 aa-1.23□□□□□ -2.61
SNORA40.16-201ENST00000517238 DCLK2Q8N568 766 aa-1.23□□□□□ -2.61
SNORA40.16-201ENST00000517238 NUP37Q8NFH4 326 aa-1.23□□□□□ -2.61
SNORA40.16-201ENST00000517238 TGFBRAP1Q8WUH2 860 aa-1.23□□□□□ -2.61
SNORA40.16-201ENST00000517238 PMM1Q92871 262 aa-1.23□□□□□ -2.61
SNORA40.16-201ENST00000517238 LINC00477Q96M19 166 aa-1.23□□□□□ -2.61
SNORA40.16-201ENST00000517238 DNAJC2Q99543 621 aaKnown RBP-1.23□□□□□ -2.61
SNORA40.16-201ENST00000517238 CMKLR1Q99788 373 aa-1.23□□□□□ -2.61
SNORA40.16-201ENST00000517238 ZMAT3Q9HA38 289 aaKnown RBP-1.23□□□□□ -2.61
SNORA40.16-201ENST00000517238 ARNT2Q9HBZ2 717 aa-1.23□□□□□ -2.61
SNORA40.16-201ENST00000517238 ZBTB20Q9HC78 741 aaPredicted RBP-1.23□□□□□ -2.61
SNORA40.16-201ENST00000517238 MCM9Q9NXL9 1143 aa-1.23□□□□□ -2.61
SNORA40.16-201ENST00000517238 DUX4Q9UBX2 424 aa-1.23□□□□□ -2.61
SNORA40.16-201ENST00000517238 NIPSNAP3AQ9UFN0 247 aaPredicted RBP-1.23□□□□□ -2.61
SNORA40.16-201ENST00000517238 POLG2Q9UHN1 485 aa-1.23□□□□□ -2.61
SNORA40.16-201ENST00000517238 DNAJC16Q9Y2G8 782 aa-1.23□□□□□ -2.61
SNORA40.16-201ENST00000517238 WDR37Q9Y2I8 494 aa-1.23□□□□□ -2.61
SNORA40.16-201ENST00000517238 SLC27A6Q9Y2P4 619 aa-1.23□□□□□ -2.61
SNORA40.16-201ENST00000517238 SEC23IPQ9Y6Y8 1000 aaKnown RBP-1.23□□□□□ -2.61
SNORA40.16-201ENST00000517238 TNKS1BP1Q9C0C2 1729 aaKnown RBP-1.23□□□□□ -2.61
SNORA40.16-201ENST00000517238 HIVEP3Q5T1R4 2406 aa-1.24□□□□□ -2.61
SNORA40.16-201ENST00000517238 LMTK3Q96Q04 1460 aa-1.24□□□□□ -2.61
SNORA40.16-201ENST00000517238 LRP2P98164 4655 aa-1.24□□□□□ -2.61
SNORA40.16-201ENST00000517238 SPATA31D1Q6ZQQ2 1576 aa-1.24□□□□□ -2.61
SNORA40.16-201ENST00000517238 IGKV2-24A0A0C4DH68 120 aa-1.24□□□□□ -2.61
SNORA40.16-201ENST00000517238 FAM231BA6NCW3 169 aa-1.24□□□□□ -2.61
SNORA40.16-201ENST00000517238 A8MU76 341 aa-1.24□□□□□ -2.61
SNORA40.16-201ENST00000517238 PI4K2BG5E9Z4 385 aa-1.24□□□□□ -2.61
SNORA40.16-201ENST00000517238 ZNF195O14628 629 aa-1.24□□□□□ -2.61
SNORA40.16-201ENST00000517238 OGTO15294 1046 aa-1.24□□□□□ -2.61
SNORA40.16-201ENST00000517238 PLRG1O43660 514 aaKnown RBP-1.24□□□□□ -2.61
SNORA40.16-201ENST00000517238 SNX2O60749 519 aa-1.24□□□□□ -2.61
SNORA40.16-201ENST00000517238 F2P00734 622 aa-1.24□□□□□ -2.61
SNORA40.16-201ENST00000517238 AHSGP02765 367 aa-1.24□□□□□ -2.61
SNORA40.16-201ENST00000517238 ASLP04424 464 aa-1.24□□□□□ -2.61
SNORA40.16-201ENST00000517238 KRTAP2-3P0C7H8 128 aa-1.24□□□□□ -2.61
SNORA40.16-201ENST00000517238 FTH1P19P0C7X4 201 aa-1.24□□□□□ -2.61
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms