RNA–Protein interactions for RNA: ENST00000516409.1

SCARNA15.2-201, small Cajal body-specific RNA 15, humanhuman

BASIC

Gene SCARNA15, Length 127 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA15.2-201ENST00000516409 ALKBH5Q6P6C2 394 aaKnown RBP3.28□□□□□ -1.88
SCARNA15.2-201ENST00000516409 FAM217AQ8IXS0 508 aa3.28□□□□□ -1.88
SCARNA15.2-201ENST00000516409 SLC4A11Q8NBS3 891 aa3.28□□□□□ -1.88
SCARNA15.2-201ENST00000516409 TSPAN14Q8NG11 270 aa3.28□□□□□ -1.88
SCARNA15.2-201ENST00000516409 OR10S1Q8NGN2 331 aa3.28□□□□□ -1.88
SCARNA15.2-201ENST00000516409 ZNF398Q8TD17 642 aa3.28□□□□□ -1.88
SCARNA15.2-201ENST00000516409 GPT2Q8TD30 523 aa3.28□□□□□ -1.88
SCARNA15.2-201ENST00000516409 CORO2AQ92828 525 aa3.28□□□□□ -1.88
SCARNA15.2-201ENST00000516409 NXNL1Q96CM4 212 aa3.28□□□□□ -1.88
SCARNA15.2-201ENST00000516409 MSI2Q96DH6 328 aaKnown RBP3.28□□□□□ -1.88
SCARNA15.2-201ENST00000516409 CLMNQ96JQ2 1002 aa3.28□□□□□ -1.88
SCARNA15.2-201ENST00000516409 CABS1Q96KC9 395 aa3.28□□□□□ -1.88
SCARNA15.2-201ENST00000516409 UROC1Q96N76 676 aa3.28□□□□□ -1.88
SCARNA15.2-201ENST00000516409 INTS14Q96SY0 518 aa3.28□□□□□ -1.88
SCARNA15.2-201ENST00000516409 DDOQ99489 341 aa3.28□□□□□ -1.88
SCARNA15.2-201ENST00000516409 FERMT1Q9BQL6 677 aa3.28□□□□□ -1.88
SCARNA15.2-201ENST00000516409 ACAT2Q9BWD1 397 aa3.28□□□□□ -1.88
SCARNA15.2-201ENST00000516409 FUT8Q9BYC5 575 aa3.28□□□□□ -1.88
SCARNA15.2-201ENST00000516409 B3GNT4Q9C0J1 378 aa3.28□□□□□ -1.88
SCARNA15.2-201ENST00000516409 PPIL3Q9H2H8 161 aaKnown RBP3.28□□□□□ -1.88
SCARNA15.2-201ENST00000516409 KLK15Q9H2R5 256 aa3.28□□□□□ -1.88
SCARNA15.2-201ENST00000516409 MMP27Q9H306 513 aa3.28□□□□□ -1.88
SCARNA15.2-201ENST00000516409 EPB41L5Q9HCM4 733 aa3.28□□□□□ -1.88
SCARNA15.2-201ENST00000516409 MKKSQ9NPJ1 570 aaPredicted RBP3.28□□□□□ -1.88
SCARNA15.2-201ENST00000516409 HINT3Q9NQE9 182 aaKnown RBP3.28□□□□□ -1.88
SCARNA15.2-201ENST00000516409 SLC17A6Q9P2U8 582 aa3.28□□□□□ -1.88
SCARNA15.2-201ENST00000516409 SLC9A2Q9UBY0 812 aa3.28□□□□□ -1.88
SCARNA15.2-201ENST00000516409 KLHL20Q9Y2M5 609 aa3.28□□□□□ -1.88
SCARNA15.2-201ENST00000516409 KNSTRNQ9Y448 316 aa3.28□□□□□ -1.88
SCARNA15.2-201ENST00000516409 IGSF1Q8N6C5 1336 aa3.27□□□□□ -1.89
SCARNA15.2-201ENST00000516409 C19orf81C9J6K1 198 aa3.27□□□□□ -1.89
SCARNA15.2-201ENST00000516409 DNM1LO00429 736 aa3.27□□□□□ -1.89
SCARNA15.2-201ENST00000516409 PSMD14O00487 310 aa3.27□□□□□ -1.89
SCARNA15.2-201ENST00000516409 SMAD9O15198 467 aaKnown RBP3.27□□□□□ -1.89
SCARNA15.2-201ENST00000516409 PLPP2O43688 288 aa3.27□□□□□ -1.89
SCARNA15.2-201ENST00000516409 HTATSF1O43719 755 aaKnown RBP3.27□□□□□ -1.89
SCARNA15.2-201ENST00000516409 STX6O43752 255 aa3.27□□□□□ -1.89
SCARNA15.2-201ENST00000516409 CREG1O75629 220 aa3.27□□□□□ -1.89
SCARNA15.2-201ENST00000516409 CAMTA2O94983 1202 aa3.27□□□□□ -1.89
SCARNA15.2-201ENST00000516409 OR52Z1P0C646 297 aa3.27□□□□□ -1.89
SCARNA15.2-201ENST00000516409 G6PDP11413 515 aa3.27□□□□□ -1.89
SCARNA15.2-201ENST00000516409 VPREB1P12018 145 aa3.27□□□□□ -1.89
SCARNA15.2-201ENST00000516409 STMN1P16949 149 aa3.27□□□□□ -1.89
SCARNA15.2-201ENST00000516409 AZGP1P25311 298 aaKnown RBP3.27□□□□□ -1.89
SCARNA15.2-201ENST00000516409 PIGAP37287 484 aa3.27□□□□□ -1.89
SCARNA15.2-201ENST00000516409 EIF2S3P41091 472 aaKnown RBP3.27□□□□□ -1.89
SCARNA15.2-201ENST00000516409 PPP3CCP48454 512 aa3.27□□□□□ -1.89
SCARNA15.2-201ENST00000516409 TUBB4BP68371 445 aa3.27□□□□□ -1.89
SCARNA15.2-201ENST00000516409 WASHC5Q12768 1159 aa3.27□□□□□ -1.89
SCARNA15.2-201ENST00000516409 PPIGQ13427 754 aaKnown RBP eCLIP3.27□□□□□ -1.89
SCARNA15.2-201ENST00000516409 ZNF268Q14587 947 aaPredicted RBP3.27□□□□□ -1.89
SCARNA15.2-201ENST00000516409 TYSND1Q2T9J0 566 aa3.27□□□□□ -1.89
SCARNA15.2-201ENST00000516409 KRTCAP3Q53RY4 240 aa3.27□□□□□ -1.89
SCARNA15.2-201ENST00000516409 MIIPQ5JXC2 388 aa3.27□□□□□ -1.89
SCARNA15.2-201ENST00000516409 IGFL4Q6B9Z1 124 aa3.27□□□□□ -1.89
SCARNA15.2-201ENST00000516409 ISM2Q6H9L7 571 aa3.27□□□□□ -1.89
SCARNA15.2-201ENST00000516409 PLEKHA7Q6IQ23 1121 aa3.27□□□□□ -1.89
SCARNA15.2-201ENST00000516409 INTS8Q75QN2 995 aaKnown RBP3.27□□□□□ -1.89
SCARNA15.2-201ENST00000516409 MTSS1LQ765P7 747 aa3.27□□□□□ -1.89
SCARNA15.2-201ENST00000516409 TRILQ7L0X0 811 aa3.27□□□□□ -1.89
SCARNA15.2-201ENST00000516409 SPATA19Q7Z5L4 167 aa3.27□□□□□ -1.89
SCARNA15.2-201ENST00000516409 DSG4Q86SJ6 1040 aa3.27□□□□□ -1.89
SCARNA15.2-201ENST00000516409 CCDC190Q86UF4 302 aa3.27□□□□□ -1.89
SCARNA15.2-201ENST00000516409 GPSM1Q86YR5 675 aa3.27□□□□□ -1.89
SCARNA15.2-201ENST00000516409 SFTPA2Q8IWL1 248 aa3.27□□□□□ -1.89
SCARNA15.2-201ENST00000516409 TUSC5Q8IXB3 177 aa3.27□□□□□ -1.89
SCARNA15.2-201ENST00000516409 MB21D2Q8IYB1 491 aaPredicted RBP3.27□□□□□ -1.89
SCARNA15.2-201ENST00000516409 ZDHHC23Q8IYP9 409 aa3.27□□□□□ -1.89
SCARNA15.2-201ENST00000516409 SYCP3Q8IZU3 236 aa3.27□□□□□ -1.89
SCARNA15.2-201ENST00000516409 GALNT16Q8N428 558 aa3.27□□□□□ -1.89
SCARNA15.2-201ENST00000516409 AFAP1Q8N556 730 aa3.27□□□□□ -1.89
SCARNA15.2-201ENST00000516409 KDM1BQ8NB78 822 aa3.27□□□□□ -1.89
SCARNA15.2-201ENST00000516409 SCCPDHQ8NBX0 429 aa3.27□□□□□ -1.89
SCARNA15.2-201ENST00000516409 CTCFLQ8NI51 663 aaPredicted RBP3.27□□□□□ -1.89
SCARNA15.2-201ENST00000516409 ARRDC2Q8TBH0 407 aa3.27□□□□□ -1.89
SCARNA15.2-201ENST00000516409 HM13Q8TCT9 377 aa3.27□□□□□ -1.89
SCARNA15.2-201ENST00000516409 IGFBPL1Q8WX77 278 aa3.27□□□□□ -1.89
SCARNA15.2-201ENST00000516409 SLC9A6Q92581 669 aa3.27□□□□□ -1.89
SCARNA15.2-201ENST00000516409 CCDC47Q96A33 483 aaKnown RBP3.27□□□□□ -1.89
SCARNA15.2-201ENST00000516409 EXOC4Q96A65 974 aa3.27□□□□□ -1.89
SCARNA15.2-201ENST00000516409 TMEM18Q96B42 140 aa3.27□□□□□ -1.89
SCARNA15.2-201ENST00000516409 C20orf173Q96LM9 149 aa3.27□□□□□ -1.89
SCARNA15.2-201ENST00000516409 CCDC43Q96MW1 224 aaKnown RBP3.27□□□□□ -1.89
SCARNA15.2-201ENST00000516409 TIMP4Q99727 224 aa3.27□□□□□ -1.89
SCARNA15.2-201ENST00000516409 SH2D3AQ9BRG2 576 aa3.27□□□□□ -1.89
SCARNA15.2-201ENST00000516409 ABHD6Q9BV23 337 aa3.27□□□□□ -1.89
SCARNA15.2-201ENST00000516409 KCNK15Q9H427 330 aa3.27□□□□□ -1.89
SCARNA15.2-201ENST00000516409 ESRP2Q9H6T0 727 aaKnown RBP3.27□□□□□ -1.89
SCARNA15.2-201ENST00000516409 PPP1R3EQ9H7J1 279 aa3.27□□□□□ -1.89
SCARNA15.2-201ENST00000516409 NOL11Q9H8H0 719 aaKnown RBP3.27□□□□□ -1.89
SCARNA15.2-201ENST00000516409 ANKZF1Q9H8Y5 726 aa3.27□□□□□ -1.89
SCARNA15.2-201ENST00000516409 CHMP1AQ9HD42 196 aaPredicted RBP3.27□□□□□ -1.89
SCARNA15.2-201ENST00000516409 RNF146Q9NTX7 359 aa3.27□□□□□ -1.89
SCARNA15.2-201ENST00000516409 OR14J1Q9UGF5 321 aa3.27□□□□□ -1.89
SCARNA15.2-201ENST00000516409 DDX25Q9UHL0 483 aaKnown RBP3.27□□□□□ -1.89
SCARNA15.2-201ENST00000516409 NFE2L3Q9Y4A8 694 aa3.27□□□□□ -1.89
SCARNA15.2-201ENST00000516409 STON1Q9Y6Q2 735 aa3.27□□□□□ -1.89
SCARNA15.2-201ENST00000516409 KAT6AQ92794 2004 aa3.26□□□□□ -1.89
SCARNA15.2-201ENST00000516409 KIR2DS5A0A0G2JLQ3 304 aa3.26□□□□□ -1.89
SCARNA15.2-201ENST00000516409 A0A1W2PPM1 405 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms